Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:32:10 (818200): wrapper (7.7.26015): starting
10:32:10 (818200): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 10:32:10] Arguments: --nthreads 12
[2025-04-16 10:32:10] Threads: 12
[2025-04-16 10:32:10] Checking for CVMFS
[2025-04-16 10:32:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 10:32:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 10:32:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 10:32:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 10:32:10] 2.11.5.0 3662 18750 208756 144933 0 425 30471551 45568001 10754 130560 0 144849759 99.695 158433340 32266 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-16 10:32:10] CVMFS is ok
[2025-04-16 10:32:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 10:32:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 10:32:10] Further information can be found at the LHC@home message board.
[2025-04-16 10:32:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 10:32:10] Checking for apptainer binary...
[2025-04-16 10:32:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 10:32:10] Running /usr/bin/apptainer --version
[2025-04-16 10:32:10] apptainer version 1.3.5-1.el9
[2025-04-16 10:32:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 10:32:11] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0104.triumf.lcg
[2025-04-16 10:32:11] apptainer works
[2025-04-16 10:32:11] Set ATHENA_PROC_NUMBER=12
[2025-04-16 10:32:11] Set ATHENA_CORE_NUMBER=12
[2025-04-16 10:32:11] Starting ATLAS job with PandaID=6603699519
[2025-04-16 10:32:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 13:37:27]  *** The last 200 lines of the pilot log: ***
[2025-04-16 13:37:27] 2025-04-16 20:37:13,399 | INFO     | sum of square deviations: 1838619954.0884056
[2025-04-16 13:37:27] 2025-04-16 20:37:13,399 | INFO     | sum of deviations: 66221786385.86189
[2025-04-16 13:37:27] 2025-04-16 20:37:13,399 | INFO     | mean x: 1744830288.4198895
[2025-04-16 13:37:27] 2025-04-16 20:37:13,399 | INFO     | mean y: 2666671.093922652
[2025-04-16 13:37:27] 2025-04-16 20:37:13,399 | INFO     | -- intersect: -62841086537.60642
[2025-04-16 13:37:27] 2025-04-16 20:37:13,399 | INFO     | intersect: -62841086537.60642
[2025-04-16 13:37:27] 2025-04-16 20:37:13,400 | INFO     | chi2: 4.8725246117592524
[2025-04-16 13:37:27] 2025-04-16 20:37:13,400 | INFO     | sum of square deviations: 1690435703.1818223
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | sum of deviations: 64359476344.13637
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | mean x: 1744830135.9318182
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | mean y: 2664754.2613636362
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | -- intersect: -66427755312.39383
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | intersect: -66427755312.39383
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | chi2: 4.880229508153769
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | current chi2=4.880229508153769 (change=-0.15812945050952606 %)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,401 | INFO     | right removable region: 175
[2025-04-16 13:37:27] 2025-04-16 20:37:13,402 | INFO     | sum of square deviations: 1690389343.1818223
[2025-04-16 13:37:27] 2025-04-16 20:37:13,402 | INFO     | sum of deviations: 17094354131.250004
[2025-04-16 13:37:27] 2025-04-16 20:37:13,402 | INFO     | mean x: 1744830440.9318182
[2025-04-16 13:37:27] 2025-04-16 20:37:13,402 | INFO     | mean y: 2717038.9375
[2025-04-16 13:37:27] 2025-04-16 20:37:13,403 | INFO     | -- intersect: -17642182094.259033
[2025-04-16 13:37:27] 2025-04-16 20:37:13,403 | INFO     | intersect: -17642182094.259033
[2025-04-16 13:37:27] 2025-04-16 20:37:13,403 | INFO     | chi2: 2.138729942595549
[2025-04-16 13:37:27] 2025-04-16 20:37:13,403 | INFO     | current chi2=2.138729942595549 (change=56.106328587156206 %)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,403 | INFO     | sum of square deviations: 1550344932.2222233
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | sum of deviations: -17458353225.333332
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | mean x: 1744830593.4444444
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | mean y: 2754673.543859649
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | -- intersect: 19651200761.639786
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | intersect: 19651200761.639786
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | chi2: 0.8479321278750678
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | current chi2=0.8479321278750678 (change=60.35347376087965 %)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,404 | INFO     | sum of square deviations: 1418254158.7048242
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | sum of deviations: -37090997312.662674
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | mean x: 1744830745.9578314
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | mean y: 2777121.048192771
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | -- intersect: 45634592908.19481
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | intersect: 45634592908.19481
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | chi2: 0.23690163244074922
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | current chi2=0.23690163244074922 (change=72.06125058211572 %)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,405 | INFO     | sum of square deviations: 1293925085.8012476
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | sum of deviations: -30563513189.67701
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | mean x: 1744830898.447205
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | mean y: 2769103.2732919254
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | -- intersect: 41217026994.73717
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | intersect: 41217026994.73717
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | chi2: 0.22627544223631427
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | current chi2=0.22627544223631427 (change=4.485486273334413 %)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,406 | INFO     | left removable region: 40
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | sum of square deviations: 762842243.333336
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | sum of deviations: 1732241823.8888886
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | mean x: 1744831325.4444444
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | mean y: 2721414.9185185186
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | -- intersect: -3959395030.493951
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | intersect: -3959395030.493951
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | chi2: 0.0017649203985057882
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | -- intersect: -3959395030.493951
[2025-04-16 13:37:27] 2025-04-16 20:37:13,407 | INFO     | current memory leak: 2.27 B/s (using 135 data points, chi2=0.00)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,408 | INFO     | ..............................
[2025-04-16 13:37:27] 2025-04-16 20:37:13,408 | INFO     | . Timing measurements:
[2025-04-16 13:37:27] 2025-04-16 20:37:13,408 | INFO     | . get job = 0 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,408 | INFO     | . initial setup = 3 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,409 | INFO     | . payload setup = 10 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,409 | INFO     | . stage-in = 0 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,409 | INFO     | . payload execution = 11035 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,409 | INFO     | . stage-out = 2 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,409 | INFO     | . log creation = 0 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,409 | INFO     | ..............................
[2025-04-16 13:37:27] 2025-04-16 20:37:13,475 | INFO     | 
[2025-04-16 13:37:27] 2025-04-16 20:37:13,475 | INFO     | job summary report
[2025-04-16 13:37:27] 2025-04-16 20:37:13,475 | INFO     | --------------------------------------------------
[2025-04-16 13:37:27] 2025-04-16 20:37:13,475 | INFO     | PanDA job id: 6603699519
[2025-04-16 13:37:27] 2025-04-16 20:37:13,475 | INFO     | task id: 44075483
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | errors: (none)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | pilot state: finished 
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | transexitcode: 0
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | exeerrorcode: 0
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | exeerrordiag: 
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | exitcode: 0
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | exitmsg: OK
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | cpuconsumptiontime: 26354 s
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | nevents: 400
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | neventsw: 0
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | pid: 830003
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | pgrp: 830003
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | corecount: 12
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | event service: False
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | sizes: {0: 2417362, 1: 2417390, 8: 2417596, 12: 2417624, 11049: 2446657, 11052: 2455592, 11053: 2455776, 11059: 2455946}
[2025-04-16 13:37:27] 2025-04-16 20:37:13,476 | INFO     | --------------------------------------------------
[2025-04-16 13:37:27] 2025-04-16 20:37:13,477 | INFO     | 
[2025-04-16 13:37:27] 2025-04-16 20:37:13,477 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-16 13:37:27] 2025-04-16 20:37:13,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,490 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,490 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,490 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | job 6603699519 has completed (purged errors)
[2025-04-16 13:37:27] 2025-04-16 20:37:13,491 | INFO     | overall cleanup function is called
[2025-04-16 13:37:27] 2025-04-16 20:37:14,499 | INFO     | --- collectZombieJob: --- 10, [830003]
[2025-04-16 13:37:27] 2025-04-16 20:37:14,499 | INFO     | zombie collector waiting for pid 830003
[2025-04-16 13:37:27] 2025-04-16 20:37:14,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 13:37:27] 2025-04-16 20:37:14,499 | INFO     | collected zombie processes
[2025-04-16 13:37:27] 2025-04-16 20:37:14,499 | INFO     | will attempt to kill all subprocesses of pid=830003
[2025-04-16 13:37:27] 2025-04-16 20:37:14,649 | INFO     | process IDs to be killed: [830003] (in reverse order)
[2025-04-16 13:37:27] 2025-04-16 20:37:14,725 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 13:37:27] 2025-04-16 20:37:14,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 13:37:27] 2025-04-16 20:37:14,733 | INFO     | did not find any defunct processes belonging to 830003
[2025-04-16 13:37:27] 2025-04-16 20:37:14,738 | INFO     | did not find any defunct processes belonging to 830003
[2025-04-16 13:37:27] 2025-04-16 20:37:14,739 | INFO     | ready for new job
[2025-04-16 13:37:27] 2025-04-16 20:37:14,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 13:37:27] 2025-04-16 20:37:14,740 | INFO     | **************************************
[2025-04-16 13:37:27] 2025-04-16 20:37:14,740 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 13:37:27] 2025-04-16 20:37:14,740 | INFO     | **************************************
[2025-04-16 13:37:27] 2025-04-16 20:37:14,740 | INFO     | 
[2025-04-16 13:37:27] 2025-04-16 20:37:14,742 | INFO     | architecture information:
[2025-04-16 13:37:27] 2025-04-16 20:37:14,742 | INFO     | executing command: cat /etc/os-release
[2025-04-16 13:37:27] 2025-04-16 20:37:14,762 | INFO     | cat /etc/os-release:
[2025-04-16 13:37:27] NAME="CentOS Linux"
[2025-04-16 13:37:27] VERSION="7 (Core)"
[2025-04-16 13:37:27] ID="centos"
[2025-04-16 13:37:27] ID_LIKE="rhel fedora"
[2025-04-16 13:37:27] VERSION_ID="7"
[2025-04-16 13:37:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 13:37:27] ANSI_COLOR="0;31"
[2025-04-16 13:37:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 13:37:27] HOME_URL="https://www.centos.org/"
[2025-04-16 13:37:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 13:37:27] 
[2025-04-16 13:37:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 13:37:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 13:37:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 13:37:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 13:37:27] 
[2025-04-16 13:37:27] 2025-04-16 20:37:14,763 | INFO     | **************************************
[2025-04-16 13:37:27] 2025-04-16 20:37:15,265 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-16 13:37:27] 2025-04-16 20:37:15,278 | INFO     | sufficient remaining disk space (2086857080832 B)
[2025-04-16 13:37:27] 2025-04-16 20:37:15,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 13:37:27] 2025-04-16 20:37:15,278 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 13:37:27] 2025-04-16 20:37:15,278 | INFO     | update_server=False
[2025-04-16 13:37:27] 2025-04-16 20:37:15,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 13:37:27] 2025-04-16 20:37:15,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 13:37:27] 2025-04-16 20:37:15,279 | INFO     | aborting loop
[2025-04-16 13:37:27] 2025-04-16 20:37:15,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 13:37:27] 2025-04-16 20:37:15,926 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 13:37:27] 2025-04-16 20:37:15,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 13:37:27] 2025-04-16 20:37:15,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 13:37:27] 2025-04-16 20:37:15,978 | INFO     | all data control threads have been joined
[2025-04-16 13:37:27] 2025-04-16 20:37:16,284 | INFO     | [job] retrieve thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:16,284 | INFO     | [job] queue monitor thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:16,284 | INFO     | [job] job monitor thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:16,478 | INFO     | all payload control threads have been joined
[2025-04-16 13:37:27] 2025-04-16 20:37:16,500 | INFO     | [payload] validate_post thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:16,538 | INFO     | all job control threads have been joined
[2025-04-16 13:37:27] 2025-04-16 20:37:16,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 13:37:27] 2025-04-16 20:37:16,932 | INFO     | [data] copytool_in thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:16,984 | INFO     | [data] control thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,052 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,148 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,363 | INFO     | [payload] failed_post thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,487 | INFO     | [payload] control thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,544 | INFO     | [job] control thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,653 | INFO     | [job] validate thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,703 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:17,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 13:37:27] 2025-04-16 20:37:18,756 | INFO     | [data] copytool_out thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:21,815 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 13:37:27] 2025-04-16 20:37:22,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468049901376)>', '<ExcThread(monitor, started 140467232564992)>']
[2025-04-16 13:37:27] 2025-04-16 20:37:22,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 13:37:27] 2025-04-16 20:37:22,965 | INFO     | [monitor] control thread has ended
[2025-04-16 13:37:27] 2025-04-16 20:37:27,470 | INFO     | all workflow threads have been joined
[2025-04-16 13:37:27] 2025-04-16 20:37:27,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 13:37:27] 2025-04-16 20:37:27,470 | INFO     | traces error code: 0
[2025-04-16 13:37:27] 2025-04-16 20:37:27,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 13:37:27] 2025-04-16 20:37:27,589 [wrapper] ==== pilot stdout END ====
[2025-04-16 13:37:27] 2025-04-16 20:37:27,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 13:37:27] 2025-04-16 20:37:27,599 [wrapper] pilotpid: 823665
[2025-04-16 13:37:27] 2025-04-16 20:37:27,607 [wrapper] Pilot exit status: 0
[2025-04-16 13:37:27] 2025-04-16 20:37:27,632 [wrapper] pandaids: 6603699519
[2025-04-16 13:37:27] 2025-04-16 20:37:27,698 [wrapper] cleanup supervisor_pilot 1175589 823666
[2025-04-16 13:37:27] 2025-04-16 20:37:27,714 [wrapper] Test setup, not cleaning
[2025-04-16 13:37:27] 2025-04-16 20:37:27,729 [wrapper] apfmon messages muted
[2025-04-16 13:37:27] 2025-04-16 20:37:27,749 [wrapper] ==== wrapper stdout END ====
[2025-04-16 13:37:27] 2025-04-16 20:37:27,771 [wrapper] ==== wrapper stderr END ====
[2025-04-16 13:37:27]  *** Error codes and diagnostics ***
[2025-04-16 13:37:27]     "exeErrorCode": 0,
[2025-04-16 13:37:27]     "exeErrorDiag": "",
[2025-04-16 13:37:27]     "pilotErrorCode": 0,
[2025-04-16 13:37:27]     "pilotErrorDiag": "",
[2025-04-16 13:37:27]  *** Listing of results directory ***
[2025-04-16 13:37:27] total 415468
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc    495897 Apr 15 20:01 pilot3.tar.gz
[2025-04-16 13:37:27] -rwx------. 1 boinc boinc     37140 Apr 15 20:10 runpilot2-wrapper.sh
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc      5111 Apr 15 20:10 queuedata.json
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc       100 Apr 16 10:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 13:37:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr 16 10:32 run_atlas
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc       105 Apr 16 10:32 job.xml
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc      6601 Apr 16 10:32 init_data.xml
[2025-04-16 13:37:27] -rw-r--r--. 2 boinc boinc 224502319 Apr 16 10:32 EVNT.44075481._001381.pool.root.1
[2025-04-16 13:37:27] -rw-r--r--. 2 boinc boinc     17569 Apr 16 10:32 start_atlas.sh
[2025-04-16 13:37:27] drwxrwx--x. 2 boinc boinc      4096 Apr 16 10:32 shared
[2025-04-16 13:37:27] -rw-r--r--. 2 boinc boinc    508883 Apr 16 10:32 input.tar.gz
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc         0 Apr 16 10:32 boinc_lockfile
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc      2578 Apr 16 10:32 pandaJob.out
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc       424 Apr 16 10:32 setup.sh.local
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc    986560 Apr 16 10:32 agis_schedconf.cvmfs.json
[2025-04-16 13:37:27] drwx------. 4 boinc boinc      4096 Apr 16 10:32 pilot3
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc 194309226 Apr 16 13:36 HITS.44075483._035179.pool.root.1
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc       531 Apr 16 13:36 boinc_task_state.xml
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc        95 Apr 16 13:36 pilot_heartbeat.json
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc      1047 Apr 16 13:36 memory_monitor_summary.json
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc   1603529 Apr 16 13:37 agis_ddmendpoints.agis.ALL.json
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc    422269 Apr 16 13:37 log.44075483._035179.job.log.tgz.1
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc      7723 Apr 16 13:37 heartbeat.json
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc        28 Apr 16 13:37 wrapper_checkpoint.txt
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc      4352 Apr 16 13:37 pilotlog.txt
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc      8192 Apr 16 13:37 boinc_mmap_file
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc    967782 Apr 16 13:37 log.44075483._035179.job.log.1
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc       357 Apr 16 13:37 output.list
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc       620 Apr 16 13:37 runtime_log
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc   1413120 Apr 16 13:37 result.tar.gz
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc     11145 Apr 16 13:37 runtime_log.err
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc       661 Apr 16 13:37 hc4LDm3L8O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMQZLDmBxRu2n.diag
[2025-04-16 13:37:27] -rw-r--r--. 1 boinc boinc     20959 Apr 16 13:37 stderr.txt
[2025-04-16 13:37:27] HITS file was successfully produced:
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc 194309226 Apr 16 13:36 shared/HITS.pool.root.1
[2025-04-16 13:37:27]  *** Contents of shared directory: ***
[2025-04-16 13:37:27] total 410904
[2025-04-16 13:37:27] -rw-r--r--. 2 boinc boinc 224502319 Apr 16 10:32 ATLAS.root_0
[2025-04-16 13:37:27] -rw-r--r--. 2 boinc boinc     17569 Apr 16 10:32 start_atlas.sh
[2025-04-16 13:37:27] -rw-r--r--. 2 boinc boinc    508883 Apr 16 10:32 input.tar.gz
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc 194309226 Apr 16 13:36 HITS.pool.root.1
[2025-04-16 13:37:27] -rw-------. 1 boinc boinc   1413120 Apr 16 13:37 result.tar.gz
13:37:29 (818200): run_atlas exited; CPU time 26480.114406
13:37:29 (818200): called boinc_finish(0)

</stderr_txt>
]]>

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