Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:34 (578949): wrapper (7.7.26015): starting
06:02:34 (578949): wrapper: running run_atlas (--nthreads 8)
[2025-04-16 06:02:34] Arguments: --nthreads 8
[2025-04-16 06:02:34] Threads: 8
[2025-04-16 06:02:34] Checking for CVMFS
[2025-04-16 06:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 06:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 06:02:35] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 06:02:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 06:02:36] 2.12.6.0 3252892 19811 147264 144919 1 565 22127171 32935937 23786 16776704 0 66145149 99.834 30461534 19500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-16 06:02:36] CVMFS is ok
[2025-04-16 06:02:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 06:02:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 06:02:36] Further information can be found at the LHC@home message board.
[2025-04-16 06:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 06:02:36] Checking for apptainer binary...
[2025-04-16 06:02:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 06:02:36] Running /usr/bin/apptainer --version
[2025-04-16 06:02:36] apptainer version 1.4.0-1.el9
[2025-04-16 06:02:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 06:02:37] c6-12-29-4.aglt2.org
[2025-04-16 06:02:37] apptainer works
[2025-04-16 06:02:38] Set ATHENA_PROC_NUMBER=8
[2025-04-16 06:02:38] Set ATHENA_CORE_NUMBER=8
[2025-04-16 06:02:38] Starting ATLAS job with PandaID=6603698965
[2025-04-16 06:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 11:16:43]  *** The last 200 lines of the pilot log: ***
[2025-04-16 11:16:43] 2025-04-16 15:16:25,839 | INFO     | sum of deviations: 211291550675.78616
[2025-04-16 11:16:43] 2025-04-16 15:16:25,839 | INFO     | mean x: 1744807243.1677632
[2025-04-16 11:16:43] 2025-04-16 15:16:25,839 | INFO     | mean y: 2382468.1414473685
[2025-04-16 11:16:43] 2025-04-16 15:16:25,840 | INFO     | -- intersect: -42315290177.34589
[2025-04-16 11:16:43] 2025-04-16 15:16:25,840 | INFO     | intersect: -42315290177.34589
[2025-04-16 11:16:43] 2025-04-16 15:16:25,840 | INFO     | chi2: 8.423157477423867
[2025-04-16 11:16:43] 2025-04-16 15:16:25,841 | INFO     | sum of square deviations: 8289024547.531776
[2025-04-16 11:16:43] 2025-04-16 15:16:25,848 | INFO     | sum of deviations: 245431039984.17712
[2025-04-16 11:16:43] 2025-04-16 15:16:25,848 | INFO     | mean x: 1744807090.6755853
[2025-04-16 11:16:43] 2025-04-16 15:16:25,849 | INFO     | mean y: 2394645.558528428
[2025-04-16 11:16:43] 2025-04-16 15:16:25,849 | INFO     | -- intersect: -51659874706.000984
[2025-04-16 11:16:43] 2025-04-16 15:16:25,849 | INFO     | intersect: -51659874706.000984
[2025-04-16 11:16:43] 2025-04-16 15:16:25,849 | INFO     | chi2: 7.045258628605134
[2025-04-16 11:16:43] 2025-04-16 15:16:25,849 | INFO     | current chi2=7.045258628605134 (change=16.358460025374587 %)
[2025-04-16 11:16:43] 2025-04-16 15:16:25,849 | INFO     | right removable region: 298
[2025-04-16 11:16:43] 2025-04-16 15:16:25,850 | INFO     | sum of square deviations: 8288919139.177284
[2025-04-16 11:16:43] 2025-04-16 15:16:25,856 | INFO     | sum of deviations: 124795824856.88318
[2025-04-16 11:16:43] 2025-04-16 15:16:25,857 | INFO     | mean x: 1744807395.6789298
[2025-04-16 11:16:43] 2025-04-16 15:16:25,857 | INFO     | mean y: 2413617.7591973245
[2025-04-16 11:16:43] 2025-04-16 15:16:25,857 | INFO     | -- intersect: -26266955705.797073
[2025-04-16 11:16:43] 2025-04-16 15:16:25,857 | INFO     | intersect: -26266955705.797073
[2025-04-16 11:16:43] 2025-04-16 15:16:25,858 | INFO     | chi2: 5.044590648746352
[2025-04-16 11:16:43] 2025-04-16 15:16:25,858 | INFO     | current chi2=5.044590648746352 (change=40.11045546438975 %)
[2025-04-16 11:16:43] 2025-04-16 15:16:25,858 | INFO     | sum of square deviations: 7879947229.333336
[2025-04-16 11:16:43] 2025-04-16 15:16:25,860 | INFO     | sum of deviations: 60024439810.190475
[2025-04-16 11:16:43] 2025-04-16 15:16:25,861 | INFO     | mean x: 1744807548.1904762
[2025-04-16 11:16:43] 2025-04-16 15:16:25,861 | INFO     | mean y: 2437763.353741497
[2025-04-16 11:16:43] 2025-04-16 15:16:25,861 | INFO     | -- intersect: -13288399422.314287
[2025-04-16 11:16:43] 2025-04-16 15:16:25,861 | INFO     | intersect: -13288399422.314287
[2025-04-16 11:16:43] 2025-04-16 15:16:25,861 | INFO     | chi2: 3.280395108416994
[2025-04-16 11:16:43] 2025-04-16 15:16:25,862 | INFO     | current chi2=3.280395108416994 (change=34.97202574341258 %)
[2025-04-16 11:16:43] 2025-04-16 15:16:25,862 | INFO     | sum of square deviations: 7484668050.809696
[2025-04-16 11:16:43] 2025-04-16 15:16:25,864 | INFO     | sum of deviations: 1952662841.4601822
[2025-04-16 11:16:43] 2025-04-16 15:16:25,864 | INFO     | mean x: 1744807700.698962
[2025-04-16 11:16:43] 2025-04-16 15:16:25,864 | INFO     | mean y: 2460153.2006920413
[2025-04-16 11:16:43] 2025-04-16 15:16:25,865 | INFO     | -- intersect: -452739882.32792014
[2025-04-16 11:16:43] 2025-04-16 15:16:25,865 | INFO     | intersect: -452739882.32792014
[2025-04-16 11:16:43] 2025-04-16 15:16:25,865 | INFO     | chi2: 1.8538593365992335
[2025-04-16 11:16:43] 2025-04-16 15:16:25,865 | INFO     | current chi2=1.8538593365992335 (change=43.486705859226745 %)
[2025-04-16 11:16:43] 2025-04-16 15:16:25,866 | INFO     | sum of square deviations: 7102883994.957777
[2025-04-16 11:16:43] 2025-04-16 15:16:25,868 | INFO     | sum of deviations: -24301543387.394363
[2025-04-16 11:16:43] 2025-04-16 15:16:25,868 | INFO     | mean x: 1744807853.1971831
[2025-04-16 11:16:43] 2025-04-16 15:16:25,868 | INFO     | mean y: 2470625.0070422534
[2025-04-16 11:16:43] 2025-04-16 15:16:25,868 | INFO     | -- intersect: 5972091384.2983265
[2025-04-16 11:16:43] 2025-04-16 15:16:25,868 | INFO     | intersect: 5972091384.2983265
[2025-04-16 11:16:43] 2025-04-16 15:16:25,869 | INFO     | chi2: 1.5547929831213878
[2025-04-16 11:16:43] 2025-04-16 15:16:25,869 | INFO     | current chi2=1.5547929831213878 (change=16.13209522284795 %)
[2025-04-16 11:16:43] 2025-04-16 15:16:25,869 | INFO     | left removable region: 40
[2025-04-16 11:16:43] 2025-04-16 15:16:25,869 | INFO     | sum of square deviations: 5325333147.519406
[2025-04-16 11:16:43] 2025-04-16 15:16:25,871 | INFO     | sum of deviations: -5767506399.449611
[2025-04-16 11:16:43] 2025-04-16 15:16:25,871 | INFO     | mean x: 1744808280.2015505
[2025-04-16 11:16:43] 2025-04-16 15:16:25,871 | INFO     | mean y: 2492631.6240310078
[2025-04-16 11:16:43] 2025-04-16 15:16:25,871 | INFO     | -- intersect: 1892175895.2077656
[2025-04-16 11:16:43] 2025-04-16 15:16:25,872 | INFO     | intersect: 1892175895.2077656
[2025-04-16 11:16:43] 2025-04-16 15:16:25,872 | INFO     | chi2: 0.010442764252405458
[2025-04-16 11:16:43] 2025-04-16 15:16:25,872 | INFO     | -- intersect: 1892175895.2077656
[2025-04-16 11:16:43] 2025-04-16 15:16:25,872 | INFO     | current memory leak: -1.08 B/s (using 258 data points, chi2=0.01)
[2025-04-16 11:16:43] 2025-04-16 15:16:25,873 | INFO     | ..............................
[2025-04-16 11:16:43] 2025-04-16 15:16:25,873 | INFO     | . Timing measurements:
[2025-04-16 11:16:43] 2025-04-16 15:16:25,873 | INFO     | . get job = 1 s
[2025-04-16 11:16:43] 2025-04-16 15:16:25,873 | INFO     | . initial setup = 10 s
[2025-04-16 11:16:43] 2025-04-16 15:16:25,873 | INFO     | . payload setup = 52 s
[2025-04-16 11:16:43] 2025-04-16 15:16:25,873 | INFO     | . stage-in = 0 s
[2025-04-16 11:16:43] 2025-04-16 15:16:25,874 | INFO     | . payload execution = 18573 s
[2025-04-16 11:16:43] 2025-04-16 15:16:25,874 | INFO     | . stage-out = 5 s
[2025-04-16 11:16:43] 2025-04-16 15:16:25,874 | INFO     | . log creation = 1 s
[2025-04-16 11:16:43] 2025-04-16 15:16:25,874 | INFO     | ..............................
[2025-04-16 11:16:43] 2025-04-16 15:16:26,253 | INFO     | 
[2025-04-16 11:16:43] 2025-04-16 15:16:26,253 | INFO     | job summary report
[2025-04-16 11:16:43] 2025-04-16 15:16:26,253 | INFO     | --------------------------------------------------
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | PanDA job id: 6603698965
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | task id: 44075483
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | errors: (none)
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | pilot state: finished 
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | transexitcode: 0
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | exeerrorcode: 0
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | exeerrordiag: 
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | exitcode: 0
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | exitmsg: OK
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | cpuconsumptiontime: 46204 s
[2025-04-16 11:16:43] 2025-04-16 15:16:26,254 | INFO     | nevents: 400
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | neventsw: 0
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | pid: 595738
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | pgrp: 595738
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | corecount: 8
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | event service: False
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | sizes: {0: 2416535, 1: 2417136, 2: 2417419, 13: 2417419, 25: 2417475, 36: 2417503, 38: 2417865, 47: 2417893, 18630: 2450153, 18631: 2450152, 18636: 2459149, 18638:
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | --------------------------------------------------
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | 
[2025-04-16 11:16:43] 2025-04-16 15:16:26,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-16 11:16:43] 2025-04-16 15:16:26,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 11:16:43] 2025-04-16 15:16:26,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 11:16:43] 2025-04-16 15:16:26,438 | INFO     | job 6603698965 has completed (purged errors)
[2025-04-16 11:16:43] 2025-04-16 15:16:26,438 | INFO     | overall cleanup function is called
[2025-04-16 11:16:43] 2025-04-16 15:16:27,465 | INFO     | --- collectZombieJob: --- 10, [595738]
[2025-04-16 11:16:43] 2025-04-16 15:16:27,465 | INFO     | zombie collector waiting for pid 595738
[2025-04-16 11:16:43] 2025-04-16 15:16:27,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 11:16:43] 2025-04-16 15:16:27,465 | INFO     | collected zombie processes
[2025-04-16 11:16:43] 2025-04-16 15:16:27,465 | INFO     | will attempt to kill all subprocesses of pid=595738
[2025-04-16 11:16:43] 2025-04-16 15:16:28,449 | INFO     | process IDs to be killed: [595738] (in reverse order)
[2025-04-16 11:16:43] 2025-04-16 15:16:28,477 | INFO     | 18766s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-16 11:16:43] 2025-04-16 15:16:28,657 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 11:16:43] 2025-04-16 15:16:28,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 11:16:43] 2025-04-16 15:16:28,673 | INFO     | did not find any defunct processes belonging to 595738
[2025-04-16 11:16:43] 2025-04-16 15:16:28,690 | INFO     | did not find any defunct processes belonging to 595738
[2025-04-16 11:16:43] 2025-04-16 15:16:28,691 | INFO     | ready for new job
[2025-04-16 11:16:43] 2025-04-16 15:16:28,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 11:16:43] 2025-04-16 15:16:28,692 | INFO     | **************************************
[2025-04-16 11:16:43] 2025-04-16 15:16:28,693 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 11:16:43] 2025-04-16 15:16:28,693 | INFO     | **************************************
[2025-04-16 11:16:43] 2025-04-16 15:16:28,693 | INFO     | 
[2025-04-16 11:16:43] 2025-04-16 15:16:28,726 | INFO     | architecture information:
[2025-04-16 11:16:43] 2025-04-16 15:16:28,731 | INFO     | executing command: cat /etc/os-release
[2025-04-16 11:16:43] 2025-04-16 15:16:28,847 | INFO     | cat /etc/os-release:
[2025-04-16 11:16:43] NAME="CentOS Linux"
[2025-04-16 11:16:43] VERSION="7 (Core)"
[2025-04-16 11:16:43] ID="centos"
[2025-04-16 11:16:43] ID_LIKE="rhel fedora"
[2025-04-16 11:16:43] VERSION_ID="7"
[2025-04-16 11:16:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 11:16:43] ANSI_COLOR="0;31"
[2025-04-16 11:16:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 11:16:43] HOME_URL="https://www.centos.org/"
[2025-04-16 11:16:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 11:16:43] 
[2025-04-16 11:16:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 11:16:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 11:16:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 11:16:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 11:16:43] 
[2025-04-16 11:16:43] 2025-04-16 15:16:28,847 | INFO     | **************************************
[2025-04-16 11:16:43] 2025-04-16 15:16:29,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-16 11:16:43] 2025-04-16 15:16:29,454 | INFO     | sufficient remaining disk space (92992962560 B)
[2025-04-16 11:16:43] 2025-04-16 15:16:29,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 11:16:43] 2025-04-16 15:16:29,455 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 11:16:43] 2025-04-16 15:16:29,455 | INFO     | update_server=False
[2025-04-16 11:16:43] 2025-04-16 15:16:29,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 11:16:43] 2025-04-16 15:16:29,483 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 11:16:43] 2025-04-16 15:16:29,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 11:16:43] 2025-04-16 15:16:29,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 11:16:43] 2025-04-16 15:16:29,515 | INFO     | all job control threads have been joined
[2025-04-16 11:16:43] 2025-04-16 15:16:29,638 | INFO     | all payload control threads have been joined
[2025-04-16 11:16:43] 2025-04-16 15:16:30,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 11:16:43] 2025-04-16 15:16:30,184 | INFO     | aborting loop
[2025-04-16 11:16:43] 2025-04-16 15:16:30,189 | INFO     | all data control threads have been joined
[2025-04-16 11:16:43] 2025-04-16 15:16:30,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 11:16:43] 2025-04-16 15:16:30,463 | INFO     | [job] retrieve thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:30,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:30,471 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:30,521 | INFO     | [job] control thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:30,644 | INFO     | [payload] control thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:30,722 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:30,954 | INFO     | [job] validate thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:30,958 | INFO     | [data] copytool_in thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:31,156 | INFO     | [payload] failed_post thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:31,190 | INFO     | [job] job monitor thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:31,195 | INFO     | [data] control thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:31,231 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:31,308 | INFO     | [payload] validate_post thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:31,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 11:16:43] 2025-04-16 15:16:31,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 11:16:43] 2025-04-16 15:16:32,318 | INFO     | [job] queue monitor thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:32,435 | INFO     | [data] copytool_out thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:35,614 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 11:16:43] 2025-04-16 15:16:35,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622016546624)>', '<ExcThread(monitor, started 140621339662080)>']
[2025-04-16 11:16:43] 2025-04-16 15:16:36,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 11:16:43] 2025-04-16 15:16:36,525 | INFO     | [monitor] control thread has ended
[2025-04-16 11:16:43] 2025-04-16 15:16:40,775 | INFO     | all workflow threads have been joined
[2025-04-16 11:16:43] 2025-04-16 15:16:40,775 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 11:16:43] 2025-04-16 15:16:40,775 | INFO     | traces error code: 0
[2025-04-16 11:16:43] 2025-04-16 15:16:40,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 11:16:43] 2025-04-16 15:16:41,928 [wrapper] ==== pilot stdout END ====
[2025-04-16 11:16:43] 2025-04-16 15:16:41,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 11:16:43] 2025-04-16 15:16:41,987 [wrapper] pilotpid: 584872
[2025-04-16 11:16:43] 2025-04-16 15:16:42,016 [wrapper] Pilot exit status: 0
[2025-04-16 11:16:43] 2025-04-16 15:16:42,167 [wrapper] pandaids: 6603698965
[2025-04-16 11:16:43] 2025-04-16 15:16:42,659 [wrapper] cleanup supervisor_pilot 1694681 584873
[2025-04-16 11:16:43] 2025-04-16 15:16:42,663 [wrapper] Test setup, not cleaning
[2025-04-16 11:16:43] 2025-04-16 15:16:42,665 [wrapper] apfmon messages muted
[2025-04-16 11:16:43] 2025-04-16 15:16:42,667 [wrapper] ==== wrapper stdout END ====
[2025-04-16 11:16:43] 2025-04-16 15:16:42,670 [wrapper] ==== wrapper stderr END ====
[2025-04-16 11:16:43]  *** Error codes and diagnostics ***
[2025-04-16 11:16:43]     "exeErrorCode": 0,
[2025-04-16 11:16:43]     "exeErrorDiag": "",
[2025-04-16 11:16:43]     "pilotErrorCode": 0,
[2025-04-16 11:16:43]     "pilotErrorDiag": "",
[2025-04-16 11:16:43]  *** Listing of results directory ***
[2025-04-16 11:16:43] total 414356
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas    495897 Apr 15 21:35 pilot3.tar.gz
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas      5111 Apr 15 22:03 queuedata.json
[2025-04-16 11:16:43] -rwx------. 1 boincer umatlas     37140 Apr 15 22:04 runpilot2-wrapper.sh
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas       100 Apr 16 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 11:16:43] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 16 06:02 run_atlas
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas       105 Apr 16 06:02 job.xml
[2025-04-16 11:16:43] -rw-r--r--. 2 boincer umatlas 225596075 Apr 16 06:02 EVNT.44075481._001363.pool.root.1
[2025-04-16 11:16:43] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 06:02 start_atlas.sh
[2025-04-16 11:16:43] drwxrwx--x. 2 boincer umatlas      4096 Apr 16 06:02 shared
[2025-04-16 11:16:43] -rw-r--r--. 2 boincer umatlas    508895 Apr 16 06:02 input.tar.gz
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas         0 Apr 16 06:02 boinc_lockfile
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas      2577 Apr 16 06:02 pandaJob.out
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas       467 Apr 16 06:02 setup.sh.local
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas    985396 Apr 16 06:03 agis_schedconf.cvmfs.json
[2025-04-16 11:16:43] drwx------. 4 boincer umatlas      4096 Apr 16 06:03 pilot3
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas 190880110 Apr 16 11:13 HITS.44075483._034720.pool.root.1
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas       531 Apr 16 11:13 boinc_task_state.xml
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas      6875 Apr 16 11:13 init_data.xml
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas      1056 Apr 16 11:15 memory_monitor_summary.json
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas   1603529 Apr 16 11:15 agis_ddmendpoints.agis.ALL.json
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas    421636 Apr 16 11:15 log.44075483._034720.job.log.tgz.1
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas        95 Apr 16 11:15 pilot_heartbeat.json
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas      7752 Apr 16 11:16 heartbeat.json
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 11:16 boinc_mmap_file
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas        28 Apr 16 11:16 wrapper_checkpoint.txt
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas      4353 Apr 16 11:16 pilotlog.txt
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas   1569050 Apr 16 11:16 log.44075483._034720.job.log.1
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas       357 Apr 16 11:16 output.list
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas       620 Apr 16 11:16 runtime_log
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas   2007040 Apr 16 11:16 result.tar.gz
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas       663 Apr 16 11:16 u0VMDmZJ7O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmyKZLDmHEyHnm.diag
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas     11429 Apr 16 11:16 runtime_log.err
[2025-04-16 11:16:43] -rw-r--r--. 1 boincer umatlas     20886 Apr 16 11:16 stderr.txt
[2025-04-16 11:16:43] HITS file was successfully produced:
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas 190880110 Apr 16 11:13 shared/HITS.pool.root.1
[2025-04-16 11:16:43]  *** Contents of shared directory: ***
[2025-04-16 11:16:43] total 409208
[2025-04-16 11:16:43] -rw-r--r--. 2 boincer umatlas 225596075 Apr 16 06:02 ATLAS.root_0
[2025-04-16 11:16:43] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 06:02 start_atlas.sh
[2025-04-16 11:16:43] -rw-r--r--. 2 boincer umatlas    508895 Apr 16 06:02 input.tar.gz
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas 190880110 Apr 16 11:13 HITS.pool.root.1
[2025-04-16 11:16:43] -rw-------. 1 boincer umatlas   2007040 Apr 16 11:16 result.tar.gz
11:16:44 (578949): run_atlas exited; CPU time 46957.738154
11:16:44 (578949): called boinc_finish(0)

</stderr_txt>
]]>

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