Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:49:05 (2194350): wrapper (7.7.26015): starting
05:49:05 (2194350): wrapper: running run_atlas (--nthreads 8)
[2025-04-16 05:49:05] Arguments: --nthreads 8
[2025-04-16 05:49:05] Threads: 8
[2025-04-16 05:49:05] Checking for CVMFS
[2025-04-16 05:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 05:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 05:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 05:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 05:49:06] 2.12.6.0 3567931 92503 275896 144919 3 496 30182194 32935936 25669 130560 0 76883735 99.669 73118608 24231 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-16 05:49:06] CVMFS is ok
[2025-04-16 05:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 05:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 05:49:06] Further information can be found at the LHC@home message board.
[2025-04-16 05:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 05:49:06] Checking for apptainer binary...
[2025-04-16 05:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 05:49:06] Running /usr/bin/apptainer --version
[2025-04-16 05:49:07] apptainer version 1.4.0-1.el9
[2025-04-16 05:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 05:49:08] c6-8-25-3.aglt2.org
[2025-04-16 05:49:08] apptainer works
[2025-04-16 05:49:08] Set ATHENA_PROC_NUMBER=8
[2025-04-16 05:49:08] Set ATHENA_CORE_NUMBER=8
[2025-04-16 05:49:08] Starting ATLAS job with PandaID=6603701943
[2025-04-16 05:49:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 09:53:26]  *** The last 200 lines of the pilot log: ***
[2025-04-16 09:53:26] 2025-04-16 13:53:13,669 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 09:53:26] 2025-04-16 13:53:13,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 09:53:26] 2025-04-16 13:53:13,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 09:53:26] 2025-04-16 13:53:13,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 09:53:26] 2025-04-16 13:53:13,678 | INFO     | fitting pss+swap vs Time
[2025-04-16 09:53:26] 2025-04-16 13:53:13,679 | INFO     | sum of square deviations: 4233100228.811708
[2025-04-16 09:53:26] 2025-04-16 13:53:13,685 | INFO     | sum of deviations: 97654062760.51056
[2025-04-16 09:53:26] 2025-04-16 13:53:13,685 | INFO     | mean x: 1744804293.3891213
[2025-04-16 09:53:26] 2025-04-16 13:53:13,685 | INFO     | mean y: 2344398.8117154813
[2025-04-16 09:53:26] 2025-04-16 13:53:13,685 | INFO     | -- intersect: -40248823483.234795
[2025-04-16 09:53:26] 2025-04-16 13:53:13,685 | INFO     | intersect: -40248823483.234795
[2025-04-16 09:53:26] 2025-04-16 13:53:13,686 | INFO     | chi2: 8.386298954612519
[2025-04-16 09:53:26] 2025-04-16 13:53:13,686 | INFO     | sum of square deviations: 3972965575.538484
[2025-04-16 09:53:26] 2025-04-16 13:53:13,692 | INFO     | sum of deviations: 140335763517.02567
[2025-04-16 09:53:26] 2025-04-16 13:53:13,692 | INFO     | mean x: 1744804140.897436
[2025-04-16 09:53:26] 2025-04-16 13:53:13,692 | INFO     | mean y: 2369205.5427350425
[2025-04-16 09:53:26] 2025-04-16 13:53:13,692 | INFO     | -- intersect: -61628776759.60253
[2025-04-16 09:53:26] 2025-04-16 13:53:13,692 | INFO     | intersect: -61628776759.60253
[2025-04-16 09:53:26] 2025-04-16 13:53:13,693 | INFO     | chi2: 6.200821685419577
[2025-04-16 09:53:26] 2025-04-16 13:53:13,693 | INFO     | current chi2=6.200821685419577 (change=26.060092551207177 %)
[2025-04-16 09:53:26] 2025-04-16 13:53:13,693 | INFO     | sum of square deviations: 3723700573.0393095
[2025-04-16 09:53:26] 2025-04-16 13:53:13,695 | INFO     | sum of deviations: 137457204592.13965
[2025-04-16 09:53:26] 2025-04-16 13:53:13,700 | INFO     | mean x: 1744803988.4017467
[2025-04-16 09:53:26] 2025-04-16 13:53:13,700 | INFO     | mean y: 2367443.650655022
[2025-04-16 09:53:26] 2025-04-16 13:53:13,700 | INFO     | -- intersect: -64405571407.126625
[2025-04-16 09:53:26] 2025-04-16 13:53:13,700 | INFO     | intersect: -64405571407.126625
[2025-04-16 09:53:26] 2025-04-16 13:53:13,701 | INFO     | chi2: 6.197888202767958
[2025-04-16 09:53:26] 2025-04-16 13:53:13,701 | INFO     | current chi2=6.197888202767958 (change=0.04730796659604723 %)
[2025-04-16 09:53:26] 2025-04-16 13:53:13,701 | INFO     | right removable region: 228
[2025-04-16 09:53:26] 2025-04-16 13:53:13,701 | INFO     | sum of square deviations: 3972908845.538484
[2025-04-16 09:53:26] 2025-04-16 13:53:13,703 | INFO     | sum of deviations: 36420412484.28206
[2025-04-16 09:53:26] 2025-04-16 13:53:13,703 | INFO     | mean x: 1744804445.897436
[2025-04-16 09:53:26] 2025-04-16 13:53:13,703 | INFO     | mean y: 2380212.3034188035
[2025-04-16 09:53:26] 2025-04-16 13:53:13,703 | INFO     | -- intersect: -15992574641.83464
[2025-04-16 09:53:26] 2025-04-16 13:53:13,703 | INFO     | intersect: -15992574641.83464
[2025-04-16 09:53:26] 2025-04-16 13:53:13,704 | INFO     | chi2: 5.476013132967091
[2025-04-16 09:53:26] 2025-04-16 13:53:13,708 | INFO     | current chi2=5.476013132967091 (change=34.70286281703268 %)
[2025-04-16 09:53:26] 2025-04-16 13:53:13,708 | INFO     | sum of square deviations: 3723601387.2314386
[2025-04-16 09:53:26] 2025-04-16 13:53:13,710 | INFO     | sum of deviations: -5115452137.436699
[2025-04-16 09:53:26] 2025-04-16 13:53:13,710 | INFO     | mean x: 1744804598.4061136
[2025-04-16 09:53:26] 2025-04-16 13:53:13,710 | INFO     | mean y: 2405604.0262008733
[2025-04-16 09:53:26] 2025-04-16 13:53:13,710 | INFO     | -- intersect: 2399403425.2570524
[2025-04-16 09:53:26] 2025-04-16 13:53:13,710 | INFO     | intersect: 2399403425.2570524
[2025-04-16 09:53:26] 2025-04-16 13:53:13,711 | INFO     | chi2: 4.19232808155866
[2025-04-16 09:53:26] 2025-04-16 13:53:13,711 | INFO     | current chi2=4.19232808155866 (change=23.44196444088669 %)
[2025-04-16 09:53:26] 2025-04-16 13:53:13,711 | INFO     | left removable region: 20
[2025-04-16 09:53:26] 2025-04-16 13:53:13,711 | INFO     | sum of square deviations: 2790225743.3076806
[2025-04-16 09:53:26] 2025-04-16 13:53:13,717 | INFO     | sum of deviations: -21907446073.42308
[2025-04-16 09:53:26] 2025-04-16 13:53:13,717 | INFO     | mean x: 1744804567.9423077
[2025-04-16 09:53:26] 2025-04-16 13:53:13,717 | INFO     | mean y: 2474875.798076923
[2025-04-16 09:53:26] 2025-04-16 13:53:13,717 | INFO     | -- intersect: 13701800843.433
[2025-04-16 09:53:26] 2025-04-16 13:53:13,717 | INFO     | intersect: 13701800843.433
[2025-04-16 09:53:26] 2025-04-16 13:53:13,718 | INFO     | chi2: 0.37569441799006525
[2025-04-16 09:53:26] 2025-04-16 13:53:13,718 | INFO     | -- intersect: 13701800843.433
[2025-04-16 09:53:26] 2025-04-16 13:53:13,718 | INFO     | current memory leak: -7.85 B/s (using 208 data points, chi2=0.38)
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | ..............................
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . Timing measurements:
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . get job = 0 s
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . initial setup = 4 s
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . payload setup = 15 s
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . stage-in = 0 s
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . payload execution = 14529 s
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . stage-out = 4 s
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | . log creation = 0 s
[2025-04-16 09:53:26] 2025-04-16 13:53:13,719 | INFO     | ..............................
[2025-04-16 09:53:26] 2025-04-16 13:53:13,999 | INFO     | 
[2025-04-16 09:53:26] 2025-04-16 13:53:14,000 | INFO     | job summary report
[2025-04-16 09:53:26] 2025-04-16 13:53:14,000 | INFO     | --------------------------------------------------
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | PanDA job id: 6603701943
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | task id: 44075483
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | errors: (none)
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | pilot state: finished 
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | transexitcode: 0
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | exeerrorcode: 0
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | exeerrordiag: 
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | exitcode: 0
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | exitmsg: OK
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | cpuconsumptiontime: 43411 s
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | nevents: 400
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | neventsw: 0
[2025-04-16 09:53:26] 2025-04-16 13:53:14,001 | INFO     | pid: 2210907
[2025-04-16 09:53:26] 2025-04-16 13:53:14,002 | INFO     | pgrp: 2210907
[2025-04-16 09:53:26] 2025-04-16 13:53:14,002 | INFO     | corecount: 8
[2025-04-16 09:53:26] 2025-04-16 13:53:14,002 | INFO     | event service: False
[2025-04-16 09:53:26] 2025-04-16 13:53:14,002 | INFO     | sizes: {0: 2416537, 1: 2417222, 2: 2417421, 3: 2417421, 14: 2417449, 16: 2417683, 24: 2417839, 14549: 2448447, 14554: 2457444, 14585: 2457558}
[2025-04-16 09:53:26] 2025-04-16 13:53:14,002 | INFO     | --------------------------------------------------
[2025-04-16 09:53:26] 2025-04-16 13:53:14,002 | INFO     | 
[2025-04-16 09:53:26] 2025-04-16 13:53:14,002 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-16 09:53:26] 2025-04-16 13:53:14,177 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,179 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 09:53:26] 2025-04-16 13:53:14,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,179 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 09:53:26] 2025-04-16 13:53:14,179 | INFO     | job 6603701943 has completed (purged errors)
[2025-04-16 09:53:26] 2025-04-16 13:53:14,179 | INFO     | overall cleanup function is called
[2025-04-16 09:53:26] 2025-04-16 13:53:15,197 | INFO     | --- collectZombieJob: --- 10, [2210907]
[2025-04-16 09:53:26] 2025-04-16 13:53:15,197 | INFO     | zombie collector waiting for pid 2210907
[2025-04-16 09:53:26] 2025-04-16 13:53:15,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 09:53:26] 2025-04-16 13:53:15,197 | INFO     | collected zombie processes
[2025-04-16 09:53:26] 2025-04-16 13:53:15,197 | INFO     | will attempt to kill all subprocesses of pid=2210907
[2025-04-16 09:53:26] 2025-04-16 13:53:15,780 | INFO     | process IDs to be killed: [2210907] (in reverse order)
[2025-04-16 09:53:26] 2025-04-16 13:53:15,922 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 09:53:26] 2025-04-16 13:53:15,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 09:53:26] 2025-04-16 13:53:15,991 | INFO     | did not find any defunct processes belonging to 2210907
[2025-04-16 09:53:26] 2025-04-16 13:53:16,009 | INFO     | did not find any defunct processes belonging to 2210907
[2025-04-16 09:53:26] 2025-04-16 13:53:16,010 | INFO     | ready for new job
[2025-04-16 09:53:26] 2025-04-16 13:53:16,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 09:53:26] 2025-04-16 13:53:16,015 | INFO     | **************************************
[2025-04-16 09:53:26] 2025-04-16 13:53:16,018 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 09:53:26] 2025-04-16 13:53:16,018 | INFO     | **************************************
[2025-04-16 09:53:26] 2025-04-16 13:53:16,018 | INFO     | 
[2025-04-16 09:53:26] 2025-04-16 13:53:16,042 | INFO     | architecture information:
[2025-04-16 09:53:26] 2025-04-16 13:53:16,054 | INFO     | executing command: cat /etc/os-release
[2025-04-16 09:53:26] 2025-04-16 13:53:16,182 | INFO     | cat /etc/os-release:
[2025-04-16 09:53:26] NAME="CentOS Linux"
[2025-04-16 09:53:26] VERSION="7 (Core)"
[2025-04-16 09:53:26] ID="centos"
[2025-04-16 09:53:26] ID_LIKE="rhel fedora"
[2025-04-16 09:53:26] VERSION_ID="7"
[2025-04-16 09:53:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 09:53:26] ANSI_COLOR="0;31"
[2025-04-16 09:53:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 09:53:26] HOME_URL="https://www.centos.org/"
[2025-04-16 09:53:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 09:53:26] 
[2025-04-16 09:53:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 09:53:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 09:53:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 09:53:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 09:53:26] 
[2025-04-16 09:53:26] 2025-04-16 13:53:16,182 | INFO     | **************************************
[2025-04-16 09:53:26] 2025-04-16 13:53:16,688 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-16 09:53:26] 2025-04-16 13:53:16,707 | INFO     | sufficient remaining disk space (73174876160 B)
[2025-04-16 09:53:26] 2025-04-16 13:53:16,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 09:53:26] 2025-04-16 13:53:16,708 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 09:53:26] 2025-04-16 13:53:16,708 | INFO     | update_server=False
[2025-04-16 09:53:26] 2025-04-16 13:53:16,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 09:53:26] 2025-04-16 13:53:16,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 09:53:26] 2025-04-16 13:53:16,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 09:53:26] 2025-04-16 13:53:16,709 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 09:53:26] 2025-04-16 13:53:16,709 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 09:53:26] 2025-04-16 13:53:16,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 09:53:26] 2025-04-16 13:53:16,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 09:53:26] 2025-04-16 13:53:16,772 | INFO     | all job control threads have been joined
[2025-04-16 09:53:26] 2025-04-16 13:53:16,800 | INFO     | all data control threads have been joined
[2025-04-16 09:53:26] 2025-04-16 13:53:16,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 09:53:26] 2025-04-16 13:53:16,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 09:53:26] 2025-04-16 13:53:16,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 09:53:26] 2025-04-16 13:53:16,822 | INFO     | will abort loop
[2025-04-16 09:53:26] 2025-04-16 13:53:17,714 | INFO     | [job] retrieve thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:17,778 | INFO     | [job] control thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:17,806 | INFO     | [data] control thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:17,828 | INFO     | [job] job monitor thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:17,838 | INFO     | [payload] failed_post thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:17,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:17,983 | INFO     | all payload control threads have been joined
[2025-04-16 09:53:26] 2025-04-16 13:53:17,987 | INFO     | [payload] validate_post thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:18,199 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:18,732 | INFO     | [data] copytool_out thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:18,947 | INFO     | [data] copytool_in thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:18,948 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:18,948 | INFO     | [job] validate thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:18,989 | INFO     | [payload] control thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:19,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 09:53:26] 2025-04-16 13:53:19,094 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:20,025 | INFO     | [job] queue monitor thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:20,718 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 09:53:26] 2025-04-16 13:53:20,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785011029824)>', '<ExcThread(monitor, started 139784383088384)>']
[2025-04-16 09:53:26] 2025-04-16 13:53:21,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 09:53:26] 2025-04-16 13:53:21,755 | INFO     | [monitor] control thread has ended
[2025-04-16 09:53:26] 2025-04-16 13:53:25,896 | INFO     | all workflow threads have been joined
[2025-04-16 09:53:26] 2025-04-16 13:53:25,896 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 09:53:26] 2025-04-16 13:53:25,897 | INFO     | traces error code: 0
[2025-04-16 09:53:26] 2025-04-16 13:53:25,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 09:53:26] 2025-04-16 13:53:26,160 [wrapper] ==== pilot stdout END ====
[2025-04-16 09:53:26] 2025-04-16 13:53:26,190 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 09:53:26] 2025-04-16 13:53:26,255 [wrapper] pilotpid: 2199694
[2025-04-16 09:53:26] 2025-04-16 13:53:26,281 [wrapper] Pilot exit status: 0
[2025-04-16 09:53:26] 2025-04-16 13:53:26,464 [wrapper] pandaids: 6603701943
[2025-04-16 09:53:26] 2025-04-16 13:53:26,624 [wrapper] cleanup supervisor_pilot 3281908 2199695
[2025-04-16 09:53:26] 2025-04-16 13:53:26,637 [wrapper] Test setup, not cleaning
[2025-04-16 09:53:26] 2025-04-16 13:53:26,656 [wrapper] apfmon messages muted
[2025-04-16 09:53:26] 2025-04-16 13:53:26,682 [wrapper] ==== wrapper stdout END ====
[2025-04-16 09:53:26] 2025-04-16 13:53:26,700 [wrapper] ==== wrapper stderr END ====
[2025-04-16 09:53:26]  *** Error codes and diagnostics ***
[2025-04-16 09:53:26]     "exeErrorCode": 0,
[2025-04-16 09:53:26]     "exeErrorDiag": "",
[2025-04-16 09:53:26]     "pilotErrorCode": 0,
[2025-04-16 09:53:26]     "pilotErrorDiag": "",
[2025-04-16 09:53:26]  *** Listing of results directory ***
[2025-04-16 09:53:26] total 417520
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas    495897 Apr 16 02:38 pilot3.tar.gz
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas      5111 Apr 16 02:51 queuedata.json
[2025-04-16 09:53:26] -rwx------. 1 boincer umatlas     37140 Apr 16 02:52 runpilot2-wrapper.sh
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas       100 Apr 16 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 09:53:26] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 16 05:49 run_atlas
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas       105 Apr 16 05:49 job.xml
[2025-04-16 09:53:26] -rw-r--r--. 2 boincer umatlas 225726939 Apr 16 05:49 EVNT.44075481._001457.pool.root.1
[2025-04-16 09:53:26] drwxrwx--x. 2 boincer umatlas      4096 Apr 16 05:49 shared
[2025-04-16 09:53:26] -rw-r--r--. 2 boincer umatlas    508895 Apr 16 05:49 input.tar.gz
[2025-04-16 09:53:26] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 05:49 start_atlas.sh
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas         0 Apr 16 05:49 boinc_lockfile
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas      2578 Apr 16 05:49 pandaJob.out
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas       467 Apr 16 05:49 setup.sh.local
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas    985396 Apr 16 05:49 agis_schedconf.cvmfs.json
[2025-04-16 09:53:26] drwx------. 4 boincer umatlas      4096 Apr 16 05:49 pilot3
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas      6858 Apr 16 09:46 init_data.xml
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas 194746285 Apr 16 09:50 HITS.44075483._037096.pool.root.1
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas       531 Apr 16 09:50 boinc_task_state.xml
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas        95 Apr 16 09:52 pilot_heartbeat.json
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas      1056 Apr 16 09:52 memory_monitor_summary.json
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas   1603529 Apr 16 09:52 agis_ddmendpoints.agis.ALL.json
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas    410308 Apr 16 09:52 log.44075483._037096.job.log.tgz.1
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas      7753 Apr 16 09:53 heartbeat.json
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas        28 Apr 16 09:53 wrapper_checkpoint.txt
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 09:53 boinc_mmap_file
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas      4662 Apr 16 09:53 pilotlog.txt
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas   1198556 Apr 16 09:53 log.44075483._037096.job.log.1
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas       357 Apr 16 09:53 output.list
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas       620 Apr 16 09:53 runtime_log
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas   1628160 Apr 16 09:53 result.tar.gz
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas     11424 Apr 16 09:53 runtime_log.err
[2025-04-16 09:53:26] -rw-------. 1 boincer umatlas       661 Apr 16 09:53 FS5KDm5nBP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVG2KDmSYPSjn.diag
[2025-04-16 09:53:26] -rw-r--r--. 1 boincer umatlas     20931 Apr 16 09:53 stderr.txt
[2025-04-16 09:53:27] HITS file was successfully produced:
[2025-04-16 09:53:27] -rw-------. 1 boincer umatlas 194746285 Apr 16 09:50 shared/HITS.pool.root.1
[2025-04-16 09:53:27]  *** Contents of shared directory: ***
[2025-04-16 09:53:27] total 412744
[2025-04-16 09:53:27] -rw-r--r--. 2 boincer umatlas 225726939 Apr 16 05:49 ATLAS.root_0
[2025-04-16 09:53:27] -rw-r--r--. 2 boincer umatlas    508895 Apr 16 05:49 input.tar.gz
[2025-04-16 09:53:27] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 05:49 start_atlas.sh
[2025-04-16 09:53:27] -rw-------. 1 boincer umatlas 194746285 Apr 16 09:50 HITS.pool.root.1
[2025-04-16 09:53:27] -rw-------. 1 boincer umatlas   1628160 Apr 16 09:53 result.tar.gz
09:53:29 (2194350): run_atlas exited; CPU time 44096.101736
09:53:29 (2194350): called boinc_finish(0)

</stderr_txt>
]]>

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