Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-16 05:53:51 (17584): Detected: vboxwrapper 26206
2025-04-16 05:53:51 (17584): Detected: BOINC client v8.0.2
2025-04-16 05:53:51 (17584): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-16 05:53:52 (17584): Successfully copied 'init_data.xml' to the shared directory.
2025-04-16 05:53:52 (17584): Create VM. (boinc_5bff22b7c916d389, slot#6)
2025-04-16 05:53:53 (17584): Setting Memory Size for VM. (4800MB)
2025-04-16 05:53:53 (17584): Setting CPU Count for VM. (8)
2025-04-16 05:53:53 (17584): Setting Chipset Options for VM.
2025-04-16 05:53:53 (17584): Setting Graphics Controller Options for VM.
2025-04-16 05:53:54 (17584): Setting Boot Options for VM.
2025-04-16 05:53:54 (17584): Setting Network Configuration for NAT.
2025-04-16 05:53:54 (17584): Enabling VM Network Access.
2025-04-16 05:53:54 (17584): Disabling USB Support for VM.
2025-04-16 05:53:55 (17584): Disabling COM Port Support for VM.
2025-04-16 05:53:55 (17584): Disabling LPT Port Support for VM.
2025-04-16 05:53:55 (17584): Disabling Audio Support for VM.
2025-04-16 05:53:55 (17584): Disabling Clipboard Support for VM.
2025-04-16 05:53:56 (17584): Disabling Drag and Drop Support for VM.
2025-04-16 05:53:56 (17584): Adding storage controller(s) to VM.
2025-04-16 05:53:56 (17584): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-16 05:53:57 (17584): Adding VirtualBox Guest Additions to VM.
2025-04-16 05:53:57 (17584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-16 05:53:57 (17584): forwarding host port 64164 to guest port 80
2025-04-16 05:53:57 (17584): Enabling remote desktop for VM.
2025-04-16 05:53:58 (17584): Required extension pack not installed, remote desktop not enabled.
2025-04-16 05:53:58 (17584): Enabling shared directory for VM.
2025-04-16 05:53:58 (17584): Starting VM using VBoxManage interface. (boinc_5bff22b7c916d389, slot#6)
2025-04-16 05:54:04 (17584): Successfully started VM. (PID = '3876')
2025-04-16 05:54:04 (17584): Reporting VM Process ID to BOINC.
2025-04-16 05:54:04 (17584): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-16 05:54:04 (17584): Guest Log: CPUID EDX: 0x178bfbff
2025-04-16 05:54:04 (17584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-16 05:54:04 (17584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-16 05:54:04 (17584): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-16 05:54:04 (17584): Detected: Web Application Enabled (http://localhost:64164)
2025-04-16 05:54:04 (17584): Preference change detected
2025-04-16 05:54:04 (17584): Setting CPU throttle for VM. (100%)
2025-04-16 05:54:04 (17584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-16 05:54:06 (17584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-16 05:54:06 (17584): Guest Log: BIOS: Booting from Hard Disk...
2025-04-16 05:54:09 (17584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-16 05:54:09 (17584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-16 05:54:09 (17584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-16 05:54:15 (17584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-16 05:54:15 (17584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-16 05:54:22 (17584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.000261 main     Log opened 2025-04-16T05:54:21.437346000Z
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.000510 main     OS Product: Linux
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.000635 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.000706 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.000759 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.000760 main     Process ID: 1376
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.000762 main     Package type: LINUX_64BITS_GENERIC
2025-04-16 05:54:22 (17584): Guest Log: 00:00:00.002839 main     5.2.32 r132073 started. Verbose level = 0
2025-04-16 05:54:23 (17584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-16 05:54:23 (17584): Guest Log: [INFO] Mounting shared directory
2025-04-16 05:54:23 (17584): Guest Log: [INFO] Checking for init_data.xml
2025-04-16 05:54:25 (17584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-16 05:54:25 (17584): Guest Log: [INFO] Detected branch: prod
2025-04-16 05:54:25 (17584): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-16 05:54:25 (17584): Guest Log: Copying input files
2025-04-16 05:54:27 (17584): Guest Log: Copied input files into RunAtlas.
2025-04-16 05:54:27 (17584): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-16 05:54:27 (17584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-16 05:54:27 (17584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-16 05:54:27 (17584): Guest Log: Further information can be found at the LHC@home message board.
2025-04-16 05:54:32 (17584): Guest Log: 00:00:10.009148 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 857 472 000ns (GuestNow=1 744 797 272 302 820 000 ns GuestLast=1 744 782 861 445 348 000 ns fSetTimeLastLoop=true )
2025-04-16 05:54:35 (17584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-16 05:54:35 (17584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-16 05:54:35 (17584): Guest Log: 2.6.3.0 1654 0 32188 144919 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-16 05:54:36 (17584): Guest Log: copied the webapp to /var/www
2025-04-16 05:54:36 (17584): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-16 05:54:36 (17584): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-16 05:54:36 (17584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-16 05:54:36 (17584): Guest Log:  *** Starting ATLAS job. (PandaID=6603701901 taskID=44075483) ***
2025-04-16 07:26:19 (17584): Guest Log:  *** Job finished ***
2025-04-16 07:26:19 (17584): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:09,713 | INFO     | [data] copytool_out thread has finished
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:10,203 | INFO     | [payload] control thread has finished
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:11,724 | INFO     | [data] queue_monitor thread has finished
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:13,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140271264098112)>', '<ExcThread(monitor, started 140270058329856)>']
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:13,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:13,730 | INFO     | [monitor] control thread has ended
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,049 | INFO     | all workflow threads have been joined
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,050 | INFO     | end of generic workflow (traces error code: 0)
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,050 | INFO     | traces error code: 0
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,153 [wrapper] ==== pilot stdout END ====
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,164 [wrapper] ==== wrapper stdout RESUME ====
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,175 [wrapper] pilotpid: 5999
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,185 [wrapper] Pilot exit status: 0
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,278 [wrapper] pandaids: 6603701901
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,335 [wrapper] cleanup supervisor_pilot  2135 6000
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,342 [wrapper] Test setup, not cleaning
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,348 [wrapper] apfmon messages muted
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,355 [wrapper] ==== wrapper stdout END ====
2025-04-16 07:26:19 (17584): Guest Log: 2025-04-16 11:26:18,361 [wrapper] ==== wrapper stderr END ====
2025-04-16 07:26:19 (17584): Guest Log:  *** Error codes and diagnostics ***
2025-04-16 07:26:19 (17584): Guest Log:     "exeErrorCode": 0,
2025-04-16 07:26:19 (17584): Guest Log:     "exeErrorDiag": "",
2025-04-16 07:26:19 (17584): Guest Log:     "pilotErrorCode": 0,
2025-04-16 07:26:19 (17584): Guest Log:     "pilotErrorDiag": "",
2025-04-16 07:26:19 (17584): Guest Log:  *** Listing of results directory ***
2025-04-16 07:26:19 (17584): Guest Log: total 193456
2025-04-16 07:26:19 (17584): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 16 06:38 pilot3.tar.gz
2025-04-16 07:26:19 (17584): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 16 06:45 queuedata.json
2025-04-16 07:26:19 (17584): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 16 06:46 runpilot2-wrapper.sh
2025-04-16 07:26:19 (17584): Guest Log: -rwxr-xr-x. 1 atlas atlas      9325 Apr 16 09:54 init_data.xml
2025-04-16 07:26:19 (17584): Guest Log: -rwxr-xr-x. 1 atlas atlas    508895 Apr 16 09:54 input.tar.gz
2025-04-16 07:26:19 (17584): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 16 09:54 start_atlas.sh
2025-04-16 07:26:19 (17584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 16 09:54 EVNT.44075481._001456.pool.root.1 -> /data/./ATLAS.root_0
2025-04-16 07:26:19 (17584): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 16 09:54 pandaJob.out
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas       424 Apr 16 09:54 setup.sh.local
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas    985396 Apr 16 09:55 agis_schedconf.cvmfs.json
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 16 09:55 agis_ddmendpoints.agis.ALL.json
2025-04-16 07:26:19 (17584): Guest Log: drwx------. 4 atlas atlas      4096 Apr 16 09:55 pilot3
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas 192740638 Apr 16 11:25 HITS.44075483._037054.pool.root.1
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 16 11:25 memory_monitor_summary.json
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas    298176 Apr 16 11:25 log.44075483._037054.job.log.tgz.1
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas        95 Apr 16 11:25 pilot_heartbeat.json
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas      7700 Apr 16 11:26 heartbeat.json
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 16 11:26 pilotlog.txt
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas    495638 Apr 16 11:26 log.44075483._037054.job.log.1
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas       357 Apr 16 11:26 output.list
2025-04-16 07:26:19 (17584): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 16 11:26 runtime_log
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas    808960 Apr 16 11:26 result.tar.gz
2025-04-16 07:26:19 (17584): Guest Log: -rw-r--r--. 1 atlas atlas     10940 Apr 16 11:26 runtime_log.err
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas       656 Apr 16 11:26 72aLDm4iBP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJlZLDmRBziUm.diag
2025-04-16 07:26:19 (17584): Guest Log: Looking for outputfile HITS.44075483._037054.pool.root.1
2025-04-16 07:26:19 (17584): Guest Log: HITS file was successfully produced
2025-04-16 07:26:19 (17584): Guest Log: -rw-------. 1 atlas atlas 192740638 Apr 16 11:25 /home/atlas/RunAtlas/HITS.44075483._037054.pool.root.1
2025-04-16 07:26:20 (17584): Guest Log: Successfully finished the ATLAS job!
2025-04-16 07:26:20 (17584): Guest Log: Copying the results back to the shared directory!
2025-04-16 07:26:20 (17584): Guest Log:  *** Contents of shared directory: ***
2025-04-16 07:26:20 (17584): Guest Log: total 409060
2025-04-16 07:26:20 (17584): Guest Log: -rwxrwxrwx. 1 root root 224776193 Apr 16 09:53 ATLAS.root_0
2025-04-16 07:26:20 (17584): Guest Log: -rwxrwxrwx. 1 root root 192740638 Apr 16 11:26 HITS.pool.root.1
2025-04-16 07:26:20 (17584): Guest Log: -rwxrwxrwx. 1 root root      9325 Apr 16 09:53 init_data.xml
2025-04-16 07:26:20 (17584): Guest Log: -rwxrwxrwx. 1 root root    508895 Apr 16 09:47 input.tar.gz
2025-04-16 07:26:20 (17584): Guest Log: -rwxrwxrwx. 1 root root    808960 Apr 16 11:26 result.tar.gz
2025-04-16 07:26:20 (17584): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 16 09:47 start_atlas.sh
2025-04-16 07:26:20 (17584): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-16 07:26:20 (17584): VM Completion File Detected.
2025-04-16 07:26:20 (17584): Powering off VM.
2025-04-16 07:26:21 (17584): Successfully stopped VM.
2025-04-16 07:26:21 (17584): Deregistering VM. (boinc_5bff22b7c916d389, slot#6)
2025-04-16 07:26:21 (17584): Removing network bandwidth throttle group from VM.
2025-04-16 07:26:21 (17584): Removing VM from VirtualBox.
07:26:26 (17584): called boinc_finish(0)

</stderr_txt>
]]>

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