Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-16 06:14:09 (3796): Detected: vboxwrapper 26206
2025-04-16 06:14:09 (3796): Detected: BOINC client v8.0.2
2025-04-16 06:14:10 (3796): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-16 06:14:10 (3796): Successfully copied 'init_data.xml' to the shared directory.
2025-04-16 06:14:10 (3796): Create VM. (boinc_c2821b06d95ddff4, slot#5)
2025-04-16 06:14:11 (3796): Setting Memory Size for VM. (4800MB)
2025-04-16 06:14:11 (3796): Setting CPU Count for VM. (8)
2025-04-16 06:14:11 (3796): Setting Chipset Options for VM.
2025-04-16 06:14:12 (3796): Setting Graphics Controller Options for VM.
2025-04-16 06:14:12 (3796): Setting Boot Options for VM.
2025-04-16 06:14:12 (3796): Setting Network Configuration for NAT.
2025-04-16 06:14:12 (3796): Enabling VM Network Access.
2025-04-16 06:14:13 (3796): Disabling USB Support for VM.
2025-04-16 06:14:13 (3796): Disabling COM Port Support for VM.
2025-04-16 06:14:13 (3796): Disabling LPT Port Support for VM.
2025-04-16 06:14:13 (3796): Disabling Audio Support for VM.
2025-04-16 06:14:14 (3796): Disabling Clipboard Support for VM.
2025-04-16 06:14:14 (3796): Disabling Drag and Drop Support for VM.
2025-04-16 06:14:14 (3796): Adding storage controller(s) to VM.
2025-04-16 06:14:14 (3796): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-16 06:14:15 (3796): Adding VirtualBox Guest Additions to VM.
2025-04-16 06:14:15 (3796): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-16 06:14:16 (3796): forwarding host port 65279 to guest port 80
2025-04-16 06:14:16 (3796): Enabling remote desktop for VM.
2025-04-16 06:14:16 (3796): Required extension pack not installed, remote desktop not enabled.
2025-04-16 06:14:16 (3796): Enabling shared directory for VM.
2025-04-16 06:14:17 (3796): Starting VM using VBoxManage interface. (boinc_c2821b06d95ddff4, slot#5)
2025-04-16 06:14:22 (3796): Successfully started VM. (PID = '17292')
2025-04-16 06:14:22 (3796): Reporting VM Process ID to BOINC.
2025-04-16 06:14:22 (3796): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-16 06:14:22 (3796): Guest Log: CPUID EDX: 0x178bfbff
2025-04-16 06:14:22 (3796): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-16 06:14:22 (3796): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-16 06:14:22 (3796): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-16 06:14:22 (3796): Detected: Web Application Enabled (http://localhost:65279)
2025-04-16 06:14:22 (3796): Preference change detected
2025-04-16 06:14:22 (3796): Setting CPU throttle for VM. (100%)
2025-04-16 06:14:22 (3796): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-16 06:14:24 (3796): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-16 06:14:24 (3796): Guest Log: BIOS: Booting from Hard Disk...
2025-04-16 06:14:27 (3796): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-16 06:14:27 (3796): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-16 06:14:27 (3796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-16 06:14:34 (3796): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-16 06:14:34 (3796): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-16 06:14:41 (3796): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.000248 main     Log opened 2025-04-16T06:14:39.845585000Z
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.000425 main     OS Product: Linux
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.000486 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.000546 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.000600 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.000601 main     Process ID: 1374
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.000603 main     Package type: LINUX_64BITS_GENERIC
2025-04-16 06:14:41 (3796): Guest Log: 00:00:00.002493 main     5.2.32 r132073 started. Verbose level = 0
2025-04-16 06:14:41 (3796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-16 06:14:41 (3796): Guest Log: [INFO] Mounting shared directory
2025-04-16 06:14:41 (3796): Guest Log: [INFO] Checking for init_data.xml
2025-04-16 06:14:45 (3796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-16 06:14:45 (3796): Guest Log: [INFO] Detected branch: prod
2025-04-16 06:14:45 (3796): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-16 06:14:45 (3796): Guest Log: Copying input files
2025-04-16 06:14:47 (3796): Guest Log: Copied input files into RunAtlas.
2025-04-16 06:14:47 (3796): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-16 06:14:47 (3796): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-16 06:14:47 (3796): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-16 06:14:47 (3796): Guest Log: Further information can be found at the LHC@home message board.
2025-04-16 06:14:51 (3796): Guest Log: 00:00:10.010700 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 925 277 000ns (GuestNow=1 744 798 490 776 587 000 ns GuestLast=1 744 784 079 851 310 000 ns fSetTimeLastLoop=true )
2025-04-16 06:14:56 (3796): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-16 06:14:56 (3796): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-16 06:14:56 (3796): Guest Log: 2.6.3.0 1653 0 32188 144919 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-16 06:14:58 (3796): Guest Log: copied the webapp to /var/www
2025-04-16 06:14:58 (3796): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-16 06:14:58 (3796): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-16 06:14:58 (3796): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-16 06:14:58 (3796): Guest Log:  *** Starting ATLAS job. (PandaID=6603701747 taskID=44075483) ***
2025-04-16 06:30:17 (3796): Guest Log:  *** Job finished ***
2025-04-16 06:30:17 (3796): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:06,555 | INFO     | [payload] run_realtimelog thread has finished
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:07,114 | INFO     | [data] copytool_out thread has finished
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:08,308 | INFO     | [data] queue_monitor thread has finished
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:10,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440747345728)>', '<ExcThread(monitor, started 140439709538048)>']
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:11,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:11,104 | INFO     | [monitor] control thread has ended
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,114 | INFO     | all workflow threads have been joined
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,115 | INFO     | end of generic workflow (traces error code: 0)
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,115 | INFO     | traces error code: 0
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,217 [wrapper] ==== pilot stdout END ====
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,228 [wrapper] ==== wrapper stdout RESUME ====
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,241 [wrapper] pilotpid: 6017
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,254 [wrapper] Pilot exit status: 0
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,348 [wrapper] pandaids: 6603701747
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,435 [wrapper] cleanup supervisor_pilot  6023 6018
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,451 [wrapper] Test setup, not cleaning
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,464 [wrapper] apfmon messages muted
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,477 [wrapper] ==== wrapper stdout END ====
2025-04-16 06:30:17 (3796): Guest Log: 2025-04-16 10:30:15,489 [wrapper] ==== wrapper stderr END ====
2025-04-16 06:30:17 (3796): Guest Log:  *** Error codes and diagnostics ***
2025-04-16 06:30:17 (3796): Guest Log:     "exeErrorCode": 65,
2025-04-16 06:30:17 (3796): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitialize(): standard std::exception is caught\"",
2025-04-16 06:30:17 (3796): Guest Log:     "pilotErrorCode": 1305,
2025-04-16 06:30:17 (3796): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitia",
2025-04-16 06:30:17 (3796): Guest Log:  *** Listing of results directory ***
2025-04-16 06:30:17 (3796): Guest Log: total 4040
2025-04-16 06:30:17 (3796): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 16 06:08 pilot3.tar.gz
2025-04-16 06:30:17 (3796): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 16 06:28 queuedata.json
2025-04-16 06:30:17 (3796): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 16 06:29 runpilot2-wrapper.sh
2025-04-16 06:30:17 (3796): Guest Log: -rwxr-xr-x. 1 atlas atlas    9325 Apr 16 10:14 init_data.xml
2025-04-16 06:30:17 (3796): Guest Log: -rwxr-xr-x. 1 atlas atlas  508899 Apr 16 10:14 input.tar.gz
2025-04-16 06:30:17 (3796): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 16 10:14 start_atlas.sh
2025-04-16 06:30:17 (3796): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 16 10:14 EVNT.44075481._001450.pool.root.1 -> /data/./ATLAS.root_0
2025-04-16 06:30:17 (3796): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 16 10:14 pandaJob.out
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas     424 Apr 16 10:15 setup.sh.local
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas  985396 Apr 16 10:15 agis_schedconf.cvmfs.json
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas 1603529 Apr 16 10:15 agis_ddmendpoints.agis.ALL.json
2025-04-16 06:30:17 (3796): Guest Log: drwx------. 4 atlas atlas    4096 Apr 16 10:15 pilot3
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas    1016 Apr 16 10:27 memory_monitor_summary.json
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas   48525 Apr 16 10:27 log.44075483._036900.job.log.tgz.1
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas      95 Apr 16 10:29 pilot_heartbeat.json
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas   11741 Apr 16 10:30 heartbeat.json
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas    4722 Apr 16 10:30 pilotlog.txt
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas  129279 Apr 16 10:30 log.44075483._036900.job.log.1
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas     188 Apr 16 10:30 output.list
2025-04-16 06:30:17 (3796): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 16 10:30 runtime_log
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas  204800 Apr 16 10:30 result.tar.gz
2025-04-16 06:30:17 (3796): Guest Log: -rw-r--r--. 1 atlas atlas   10787 Apr 16 10:30 runtime_log.err
2025-04-16 06:30:17 (3796): Guest Log: -rw-------. 1 atlas atlas     645 Apr 16 10:30 nMNODm5RBP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmajZLDmu1Ou4m.diag
2025-04-16 06:30:17 (3796): Guest Log: Looking for outputfile HITS.44075483._036900.pool.root.1
2025-04-16 06:30:17 (3796): Guest Log: No HITS file was produced
2025-04-16 06:30:17 (3796): Guest Log: Successfully finished the ATLAS job!
2025-04-16 06:30:17 (3796): Guest Log: Copying the results back to the shared directory!
2025-04-16 06:30:17 (3796): Guest Log:  *** Contents of shared directory: ***
2025-04-16 06:30:17 (3796): Guest Log: total 220348
2025-04-16 06:30:17 (3796): Guest Log: -rwxrwxrwx. 1 root root 224884783 Apr 16 10:14 ATLAS.root_0
2025-04-16 06:30:17 (3796): Guest Log: -rwxrwxrwx. 1 root root      9325 Apr 16 10:14 init_data.xml
2025-04-16 06:30:17 (3796): Guest Log: -rwxrwxrwx. 1 root root    508899 Apr 16 09:47 input.tar.gz
2025-04-16 06:30:17 (3796): Guest Log: -rwxrwxrwx. 1 root root    204800 Apr 16 10:30 result.tar.gz
2025-04-16 06:30:17 (3796): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 16 09:47 start_atlas.sh
2025-04-16 06:30:17 (3796): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-16 06:30:17 (3796): VM Completion File Detected.
2025-04-16 06:30:17 (3796): Powering off VM.
2025-04-16 06:30:17 (3796): Successfully stopped VM.
2025-04-16 06:30:17 (3796): Deregistering VM. (boinc_c2821b06d95ddff4, slot#5)
2025-04-16 06:30:18 (3796): Removing network bandwidth throttle group from VM.
2025-04-16 06:30:18 (3796): Removing VM from VirtualBox.
06:30:23 (3796): called boinc_finish(0)

</stderr_txt>
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