Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:06:31 (63088): wrapper (7.7.26015): starting
05:06:31 (63088): wrapper: running run_atlas (--nthreads 8)
[2025-04-16 05:06:31] Arguments: --nthreads 8
[2025-04-16 05:06:31] Threads: 8
[2025-04-16 05:06:31] Checking for CVMFS
[2025-04-16 05:06:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 05:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 05:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 05:06:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 05:06:33] 2.12.6.0 20986 42780 703448 144919 1 463 26656752 32935936 42822 130560 0 177237372 99.727 132667436 17749 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-16 05:06:33] CVMFS is ok
[2025-04-16 05:06:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 05:06:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 05:06:33] Further information can be found at the LHC@home message board.
[2025-04-16 05:06:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 05:06:33] Checking for apptainer binary...
[2025-04-16 05:06:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 05:06:33] Running /usr/bin/apptainer --version
[2025-04-16 05:06:33] apptainer version 1.4.0-1.el9
[2025-04-16 05:06:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 05:06:34] lc-10-10.aglt2.org
[2025-04-16 05:06:34] apptainer works
[2025-04-16 05:06:34] Set ATHENA_PROC_NUMBER=8
[2025-04-16 05:06:34] Set ATHENA_CORE_NUMBER=8
[2025-04-16 05:06:34] Starting ATLAS job with PandaID=6603693139
[2025-04-16 05:06:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 11:30:37]  *** The last 200 lines of the pilot log: ***
[2025-04-16 11:30:37] 2025-04-16 15:30:12,133 | INFO     | mean y: 2093279.9311294765
[2025-04-16 11:30:37] 2025-04-16 15:30:12,133 | INFO     | -- intersect: -17068441119.8784
[2025-04-16 11:30:37] 2025-04-16 15:30:12,134 | INFO     | intersect: -17068441119.8784
[2025-04-16 11:30:37] 2025-04-16 15:30:12,134 | INFO     | chi2: 4.755581884734714
[2025-04-16 11:30:37] 2025-04-16 15:30:12,134 | INFO     | current chi2=4.755581884734714 (change=30.681854980736173 %)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,135 | INFO     | sum of square deviations: 14227179875.198273
[2025-04-16 11:30:37] 2025-04-16 15:30:12,138 | INFO     | sum of deviations: 83401909762.53627
[2025-04-16 11:30:37] 2025-04-16 15:30:12,138 | INFO     | mean x: 1744806461.8184357
[2025-04-16 11:30:37] 2025-04-16 15:30:12,138 | INFO     | mean y: 2108848.100558659
[2025-04-16 11:30:37] 2025-04-16 15:30:12,138 | INFO     | -- intersect: -10226214147.614948
[2025-04-16 11:30:37] 2025-04-16 15:30:12,139 | INFO     | intersect: -10226214147.614948
[2025-04-16 11:30:37] 2025-04-16 15:30:12,139 | INFO     | chi2: 3.304170955917402
[2025-04-16 11:30:37] 2025-04-16 15:30:12,139 | INFO     | current chi2=3.304170955917402 (change=30.52015429439457 %)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,140 | INFO     | sum of square deviations: 13639310827.184067
[2025-04-16 11:30:37] 2025-04-16 15:30:12,143 | INFO     | sum of deviations: 25714619293.898064
[2025-04-16 11:30:37] 2025-04-16 15:30:12,143 | INFO     | mean x: 1744806614.322946
[2025-04-16 11:30:37] 2025-04-16 15:30:12,143 | INFO     | mean y: 2123800.790368272
[2025-04-16 11:30:37] 2025-04-16 15:30:12,144 | INFO     | -- intersect: -3287414680.8290076
[2025-04-16 11:30:37] 2025-04-16 15:30:12,144 | INFO     | intersect: -3287414680.8290076
[2025-04-16 11:30:37] 2025-04-16 15:30:12,144 | INFO     | chi2: 1.9988273485050803
[2025-04-16 11:30:37] 2025-04-16 15:30:12,144 | INFO     | current chi2=1.9988273485050803 (change=39.50593431234534 %)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,145 | INFO     | sum of square deviations: 13067882102.307426
[2025-04-16 11:30:37] 2025-04-16 15:30:12,148 | INFO     | sum of deviations: -18371085546.2501
[2025-04-16 11:30:37] 2025-04-16 15:30:12,148 | INFO     | mean x: 1744806766.8247128
[2025-04-16 11:30:37] 2025-04-16 15:30:12,148 | INFO     | mean y: 2135561.75
[2025-04-16 11:30:37] 2025-04-16 15:30:12,149 | INFO     | -- intersect: 2455019213.749967
[2025-04-16 11:30:37] 2025-04-16 15:30:12,149 | INFO     | intersect: 2455019213.749967
[2025-04-16 11:30:37] 2025-04-16 15:30:12,149 | INFO     | chi2: 1.232186192012039
[2025-04-16 11:30:37] 2025-04-16 15:30:12,149 | INFO     | current chi2=1.232186192012039 (change=38.3545460825524 %)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,150 | INFO     | sum of square deviations: 12512639727.428621
[2025-04-16 11:30:37] 2025-04-16 15:30:12,153 | INFO     | sum of deviations: -45123841504.2041
[2025-04-16 11:30:37] 2025-04-16 15:30:12,153 | INFO     | mean x: 1744806919.3265307
[2025-04-16 11:30:37] 2025-04-16 15:30:12,153 | INFO     | mean y: 2142895.6268221573
[2025-04-16 11:30:37] 2025-04-16 15:30:12,153 | INFO     | -- intersect: 6294371601.81596
[2025-04-16 11:30:37] 2025-04-16 15:30:12,153 | INFO     | intersect: 6294371601.81596
[2025-04-16 11:30:37] 2025-04-16 15:30:12,154 | INFO     | chi2: 0.9153047281731648
[2025-04-16 11:30:37] 2025-04-16 15:30:12,154 | INFO     | current chi2=0.9153047281731648 (change=25.717011430020804 %)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,154 | INFO     | sum of square deviations: 11973371940.701166
[2025-04-16 11:30:37] 2025-04-16 15:30:12,157 | INFO     | sum of deviations: -52734110806.94972
[2025-04-16 11:30:37] 2025-04-16 15:30:12,157 | INFO     | mean x: 1744807071.8254437
[2025-04-16 11:30:37] 2025-04-16 15:30:12,158 | INFO     | mean y: 2145032.831360947
[2025-04-16 11:30:37] 2025-04-16 15:30:12,158 | INFO     | -- intersect: 7686768037.786157
[2025-04-16 11:30:37] 2025-04-16 15:30:12,158 | INFO     | intersect: 7686768037.786157
[2025-04-16 11:30:37] 2025-04-16 15:30:12,158 | INFO     | chi2: 0.8649875920033079
[2025-04-16 11:30:37] 2025-04-16 15:30:12,158 | INFO     | current chi2=0.8649875920033079 (change=5.497309761557081 %)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,159 | INFO     | left removable region: 70
[2025-04-16 11:30:37] 2025-04-16 15:30:12,159 | INFO     | sum of square deviations: 8123357992.249139
[2025-04-16 11:30:37] 2025-04-16 15:30:12,161 | INFO     | sum of deviations: -18434934876.65657
[2025-04-16 11:30:37] 2025-04-16 15:30:12,161 | INFO     | mean x: 1744807956.3164983
[2025-04-16 11:30:37] 2025-04-16 15:30:12,162 | INFO     | mean y: 2148999.868686869
[2025-04-16 11:30:37] 2025-04-16 15:30:12,162 | INFO     | -- intersect: 3961770264.579335
[2025-04-16 11:30:37] 2025-04-16 15:30:12,162 | INFO     | intersect: 3961770264.579335
[2025-04-16 11:30:37] 2025-04-16 15:30:12,162 | INFO     | chi2: 0.1342921252897921
[2025-04-16 11:30:37] 2025-04-16 15:30:12,162 | INFO     | -- intersect: 3961770264.579335
[2025-04-16 11:30:37] 2025-04-16 15:30:12,163 | INFO     | current memory leak: -2.27 B/s (using 297 data points, chi2=0.13)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,163 | INFO     | ..............................
[2025-04-16 11:30:37] 2025-04-16 15:30:12,163 | INFO     | . Timing measurements:
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | . get job = 1 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | . initial setup = 10 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | . payload setup = 52 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | . stage-in = 0 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | . payload execution = 22736 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | . stage-out = 8 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | . log creation = 1 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,164 | INFO     | ..............................
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | 
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | job summary report
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | --------------------------------------------------
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | PanDA job id: 6603693139
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | task id: 44075483
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | errors: (none)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | pilot state: finished 
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | transexitcode: 0
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | exeerrorcode: 0
[2025-04-16 11:30:37] 2025-04-16 15:30:12,266 | INFO     | exeerrordiag: 
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | exitcode: 0
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | exitmsg: OK
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | cpuconsumptiontime: 44394 s
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | nevents: 400
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | neventsw: 0
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | pid: 151594
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | pgrp: 151594
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | corecount: 8
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | event service: False
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | sizes: {0: 2416487, 1: 2417343, 2: 2417343, 13: 2417371, 25: 2417427, 36: 2417455, 42: 2417817, 47: 2417873, 22793: 2451366, 22794: 2451365, 22805: 2460362, 22806:
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | --------------------------------------------------
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | 
[2025-04-16 11:30:37] 2025-04-16 15:30:12,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-16 11:30:37] 2025-04-16 15:30:12,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,427 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,427 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 11:30:37] 2025-04-16 15:30:12,427 | INFO     | job 6603693139 has completed (purged errors)
[2025-04-16 11:30:37] 2025-04-16 15:30:12,427 | INFO     | overall cleanup function is called
[2025-04-16 11:30:37] 2025-04-16 15:30:13,448 | INFO     | --- collectZombieJob: --- 10, [151594]
[2025-04-16 11:30:37] 2025-04-16 15:30:13,448 | INFO     | zombie collector waiting for pid 151594
[2025-04-16 11:30:37] 2025-04-16 15:30:13,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 11:30:37] 2025-04-16 15:30:13,448 | INFO     | collected zombie processes
[2025-04-16 11:30:37] 2025-04-16 15:30:13,448 | INFO     | will attempt to kill all subprocesses of pid=151594
[2025-04-16 11:30:37] 2025-04-16 15:30:20,095 | INFO     | process IDs to be killed: [151594] (in reverse order)
[2025-04-16 11:30:37] 2025-04-16 15:30:20,786 | INFO     | PID=86721 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-16 11:30:37] 2025-04-16 15:30:20,787 | INFO     | .. there are 91 such processes running
[2025-04-16 11:30:37] 2025-04-16 15:30:21,824 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 11:30:37] 2025-04-16 15:30:21,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 11:30:37] 2025-04-16 15:30:22,087 | INFO     | did not find any defunct processes belonging to 151594
[2025-04-16 11:30:37] 2025-04-16 15:30:22,373 | INFO     | did not find any defunct processes belonging to 151594
[2025-04-16 11:30:37] 2025-04-16 15:30:22,373 | INFO     | ready for new job
[2025-04-16 11:30:37] 2025-04-16 15:30:22,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 11:30:37] 2025-04-16 15:30:22,375 | INFO     | **************************************
[2025-04-16 11:30:37] 2025-04-16 15:30:22,375 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 11:30:37] 2025-04-16 15:30:22,375 | INFO     | **************************************
[2025-04-16 11:30:37] 2025-04-16 15:30:22,401 | INFO     | 
[2025-04-16 11:30:37] 2025-04-16 15:30:22,445 | INFO     | architecture information:
[2025-04-16 11:30:37] 2025-04-16 15:30:22,460 | INFO     | executing command: cat /etc/os-release
[2025-04-16 11:30:37] 2025-04-16 15:30:22,548 | INFO     | cat /etc/os-release:
[2025-04-16 11:30:37] NAME="CentOS Linux"
[2025-04-16 11:30:37] VERSION="7 (Core)"
[2025-04-16 11:30:37] ID="centos"
[2025-04-16 11:30:37] ID_LIKE="rhel fedora"
[2025-04-16 11:30:37] VERSION_ID="7"
[2025-04-16 11:30:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 11:30:37] ANSI_COLOR="0;31"
[2025-04-16 11:30:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 11:30:37] HOME_URL="https://www.centos.org/"
[2025-04-16 11:30:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 11:30:37] 
[2025-04-16 11:30:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 11:30:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 11:30:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 11:30:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 11:30:37] 
[2025-04-16 11:30:37] 2025-04-16 15:30:22,548 | INFO     | **************************************
[2025-04-16 11:30:37] 2025-04-16 15:30:23,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-16 11:30:37] 2025-04-16 15:30:23,133 | INFO     | sufficient remaining disk space (93847552000 B)
[2025-04-16 11:30:37] 2025-04-16 15:30:23,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 11:30:37] 2025-04-16 15:30:23,134 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 11:30:37] 2025-04-16 15:30:23,134 | INFO     | update_server=False
[2025-04-16 11:30:37] 2025-04-16 15:30:23,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 11:30:37] 2025-04-16 15:30:23,134 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 11:30:37] 2025-04-16 15:30:23,134 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 11:30:37] 2025-04-16 15:30:23,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 11:30:37] 2025-04-16 15:30:23,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 11:30:37] 2025-04-16 15:30:23,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 11:30:37] 2025-04-16 15:30:23,416 | INFO     | all job control threads have been joined
[2025-04-16 11:30:37] 2025-04-16 15:30:23,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 11:30:37] 2025-04-16 15:30:23,817 | INFO     | aborting loop
[2025-04-16 11:30:37] 2025-04-16 15:30:24,106 | INFO     | all payload control threads have been joined
[2025-04-16 11:30:37] 2025-04-16 15:30:24,146 | INFO     | [job] retrieve thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,174 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,223 | INFO     | all data control threads have been joined
[2025-04-16 11:30:37] 2025-04-16 15:30:24,266 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,421 | INFO     | [job] control thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,467 | INFO     | [payload] failed_post thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,631 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,769 | INFO     | [job] validate thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,823 | INFO     | [job] job monitor thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:24,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 11:30:37] 2025-04-16 15:30:24,973 | INFO     | [payload] validate_post thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:25,115 | INFO     | [payload] control thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:25,142 | INFO     | [data] copytool_out thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:25,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:25,229 | INFO     | [data] control thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:25,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 11:30:37] 2025-04-16 15:30:25,643 | INFO     | [data] copytool_in thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:26,424 | INFO     | [job] queue monitor thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:28,887 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 11:30:37] 2025-04-16 15:30:30,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797851555648)>', '<ExcThread(monitor, started 139796622079744)>']
[2025-04-16 11:30:37] 2025-04-16 15:30:31,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 11:30:37] 2025-04-16 15:30:31,207 | INFO     | [monitor] control thread has ended
[2025-04-16 11:30:37] 2025-04-16 15:30:35,782 | INFO     | all workflow threads have been joined
[2025-04-16 11:30:37] 2025-04-16 15:30:35,782 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 11:30:37] 2025-04-16 15:30:35,782 | INFO     | traces error code: 0
[2025-04-16 11:30:37] 2025-04-16 15:30:35,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 11:30:37] 2025-04-16 15:30:36,114 [wrapper] ==== pilot stdout END ====
[2025-04-16 11:30:37] 2025-04-16 15:30:36,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 11:30:37] 2025-04-16 15:30:36,179 [wrapper] pilotpid: 86721
[2025-04-16 11:30:37] 2025-04-16 15:30:36,181 [wrapper] Pilot exit status: 0
[2025-04-16 11:30:37] 2025-04-16 15:30:36,275 [wrapper] pandaids: 6603693139
[2025-04-16 11:30:37] 2025-04-16 15:30:37,023 [wrapper] cleanup supervisor_pilot 2275828 86722
[2025-04-16 11:30:37] 2025-04-16 15:30:37,074 [wrapper] Test setup, not cleaning
[2025-04-16 11:30:37] 2025-04-16 15:30:37,120 [wrapper] apfmon messages muted
[2025-04-16 11:30:37] 2025-04-16 15:30:37,123 [wrapper] ==== wrapper stdout END ====
[2025-04-16 11:30:37] 2025-04-16 15:30:37,139 [wrapper] ==== wrapper stderr END ====
[2025-04-16 11:30:37]  *** Error codes and diagnostics ***
[2025-04-16 11:30:37]     "exeErrorCode": 0,
[2025-04-16 11:30:37]     "exeErrorDiag": "",
[2025-04-16 11:30:37]     "pilotErrorCode": 0,
[2025-04-16 11:30:37]     "pilotErrorDiag": "",
[2025-04-16 11:30:37]  *** Listing of results directory ***
[2025-04-16 11:30:37] total 415412
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas    495897 Apr 15 15:12 pilot3.tar.gz
[2025-04-16 11:30:37] -rwx------. 1 boincer umatlas     37140 Apr 15 15:21 runpilot2-wrapper.sh
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas      5111 Apr 15 15:21 queuedata.json
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas       100 Apr 16 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 11:30:37] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 16 05:06 run_atlas
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas       105 Apr 16 05:06 job.xml
[2025-04-16 11:30:37] -rw-r--r--. 2 boincer umatlas 225200084 Apr 16 05:06 EVNT.44075481._001225.pool.root.1
[2025-04-16 11:30:37] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 05:06 start_atlas.sh
[2025-04-16 11:30:37] drwxrwx--x. 2 boincer umatlas      4096 Apr 16 05:06 shared
[2025-04-16 11:30:37] -rw-r--r--. 2 boincer umatlas    508894 Apr 16 05:06 input.tar.gz
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas         0 Apr 16 05:06 boinc_lockfile
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas      2578 Apr 16 05:06 pandaJob.out
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas       467 Apr 16 05:06 setup.sh.local
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas    985396 Apr 16 05:07 agis_schedconf.cvmfs.json
[2025-04-16 11:30:37] drwx------. 4 boincer umatlas      4096 Apr 16 05:08 pilot3
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas      6865 Apr 16 11:21 init_data.xml
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas 192249311 Apr 16 11:28 HITS.44075483._031273.pool.root.1
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas       531 Apr 16 11:28 boinc_task_state.xml
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas      1044 Apr 16 11:29 memory_monitor_summary.json
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas   1603529 Apr 16 11:29 agis_ddmendpoints.agis.ALL.json
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas    449915 Apr 16 11:29 log.44075483._031273.job.log.tgz.1
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas        95 Apr 16 11:29 pilot_heartbeat.json
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas      7730 Apr 16 11:30 heartbeat.json
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 11:30 boinc_mmap_file
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas        28 Apr 16 11:30 wrapper_checkpoint.txt
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas      4476 Apr 16 11:30 pilotlog.txt
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas   1595175 Apr 16 11:30 log.44075483._031273.job.log.1
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas       357 Apr 16 11:30 output.list
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas       620 Apr 16 11:30 runtime_log
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas   2068480 Apr 16 11:30 result.tar.gz
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas     11419 Apr 16 11:30 runtime_log.err
[2025-04-16 11:30:37] -rw-------. 1 boincer umatlas       657 Apr 16 11:30 md9NDm610O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfkYLDmjj4zDn.diag
[2025-04-16 11:30:37] -rw-r--r--. 1 boincer umatlas     21028 Apr 16 11:30 stderr.txt
[2025-04-16 11:30:38] HITS file was successfully produced:
[2025-04-16 11:30:38] -rw-------. 1 boincer umatlas 192249311 Apr 16 11:28 shared/HITS.pool.root.1
[2025-04-16 11:30:38]  *** Contents of shared directory: ***
[2025-04-16 11:30:38] total 410212
[2025-04-16 11:30:38] -rw-r--r--. 2 boincer umatlas 225200084 Apr 16 05:06 ATLAS.root_0
[2025-04-16 11:30:38] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 05:06 start_atlas.sh
[2025-04-16 11:30:38] -rw-r--r--. 2 boincer umatlas    508894 Apr 16 05:06 input.tar.gz
[2025-04-16 11:30:38] -rw-------. 1 boincer umatlas 192249311 Apr 16 11:28 HITS.pool.root.1
[2025-04-16 11:30:38] -rw-------. 1 boincer umatlas   2068480 Apr 16 11:30 result.tar.gz
11:30:39 (63088): run_atlas exited; CPU time 45964.774557
11:30:39 (63088): called boinc_finish(0)

</stderr_txt>
]]>

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