Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:58:54 (1617020): wrapper (7.7.26015): starting
14:58:54 (1617020): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 14:58:54] Arguments: --nthreads 12
[2025-04-16 14:58:54] Threads: 12
[2025-04-16 14:58:54] Checking for CVMFS
[2025-04-16 14:58:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 14:58:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 14:58:55] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 14:58:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 14:58:55] 2.12.7.0 9969 22298 341152 144924 3 187 28724974 46080001 6394 130560 140 228659232 99.950 41247271 3625 http://sampacs01.if.usp.br:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-16 14:58:55] CVMFS is ok
[2025-04-16 14:58:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 14:58:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 14:58:55] Further information can be found at the LHC@home message board.
[2025-04-16 14:58:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 14:58:55] Checking for apptainer binary...
[2025-04-16 14:58:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 14:58:55] Running /usr/bin/apptainer --version
[2025-04-16 14:58:55] apptainer version 1.4.0-1.el9
[2025-04-16 14:58:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 14:58:55] mff2104.farm.particle.cz
[2025-04-16 14:58:55] apptainer works
[2025-04-16 14:58:55] Set ATHENA_PROC_NUMBER=12
[2025-04-16 14:58:55] Set ATHENA_CORE_NUMBER=12
[2025-04-16 14:58:55] Starting ATLAS job with PandaID=6603698420
[2025-04-16 14:58:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 15:59:28]  *** The last 200 lines of the pilot log: ***
[2025-04-16 15:59:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-16 15:59:29]  is_altstaged=None
[2025-04-16 15:59:29]  is_tar=False
[2025-04-16 15:59:29]  lfn=log.44075483._034188.job.log.tgz.1
[2025-04-16 15:59:29]  mtime=0
[2025-04-16 15:59:29]  protocol_id=None
[2025-04-16 15:59:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 15:59:29]  replicas=None
[2025-04-16 15:59:29]  scope=mc23_13p6TeV
[2025-04-16 15:59:29]  status=None
[2025-04-16 15:59:29]  status_code=0
[2025-04-16 15:59:29]  storage_token=
[2025-04-16 15:59:29]  surl=/scratch/.boinc/slots/7/PanDA_Pilot-6603698420/log.44075483._034188.job.log.tgz.1
[2025-04-16 15:59:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/ab/log.44075483._034188.job.log.tgz.1
[2025-04-16 15:59:29]  workdir=None
[2025-04-16 15:59:29] ]
[2025-04-16 15:59:29] 2025-04-16 13:59:05,299 | INFO     | transferring file log.44075483._034188.job.log.tgz.1 from /scratch/.boinc/slots/7/PanDA_Pilot-6603698420/log.44075483._034188.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-16 15:59:29] 2025-04-16 13:59:05,318 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/7/PanDA_Pilot-6603698420/log.44075483._034188.job.log.tgz.1 /scratch/.boinc/slots/7/log.44075483._034188.j
[2025-04-16 15:59:29] 2025-04-16 13:59:05,343 | INFO     | adding to output.list: log.44075483._034188.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/ab/log.44075483._034188.job.log.tg
[2025-04-16 15:59:29] 2025-04-16 13:59:05,344 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 15:59:29] 2025-04-16 13:59:05,344 | INFO     | summary of transferred files:
[2025-04-16 15:59:29] 2025-04-16 13:59:05,344 | INFO     |  -- lfn=log.44075483._034188.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 15:59:29] 2025-04-16 13:59:05,344 | INFO     | stage-out finished correctly
[2025-04-16 15:59:29] 2025-04-16 13:59:06,099 | WARNING  | process 1637251 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 15:59:29] 2025-04-16 13:59:06,099 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6603698420/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 15:59:29] 2025-04-16 13:59:06,437 | INFO     | number of running child processes to parent process 1637251: 1
[2025-04-16 15:59:29] 2025-04-16 13:59:06,437 | INFO     | maximum number of monitored processes: 6
[2025-04-16 15:59:29] 2025-04-16 13:59:07,003 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 15:59:29] 2025-04-16 13:59:07,091 | INFO     | job 6603698420 has state=finished
[2025-04-16 15:59:29] 2025-04-16 13:59:07,092 | INFO     | preparing for final server update for job 6603698420 in state='finished'
[2025-04-16 15:59:29] 2025-04-16 13:59:07,092 | INFO     | this job has now completed (state=finished)
[2025-04-16 15:59:29] 2025-04-16 13:59:07,092 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 15:59:29] 2025-04-16 13:59:07,093 | INFO     | log transfer has been attempted: DONE
[2025-04-16 15:59:29] 2025-04-16 13:59:07,093 | INFO     | job 6603698420 has finished - writing final server update
[2025-04-16 15:59:29] 2025-04-16 13:59:07,093 | INFO     | total number of processed events: 400 (read)
[2025-04-16 15:59:29] 2025-04-16 13:59:07,101 | INFO     | executing command: lscpu
[2025-04-16 15:59:29] 2025-04-16 13:59:07,188 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 15:59:29] 2025-04-16 13:59:08,941 | INFO     | monitor loop #263: job 0:6603698420 is in state 'finished'
[2025-04-16 15:59:29] 2025-04-16 13:59:08,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 15:59:29] 2025-04-16 13:59:11,444 | INFO     | monitor loop #264: job 0:6603698420 is in state 'finished'
[2025-04-16 15:59:29] 2025-04-16 13:59:11,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 15:59:29] 2025-04-16 13:59:12,418 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-16 15:59:29] 2025-04-16 13:59:12,418 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6603698420/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 15:59:29] 2025-04-16 13:59:12,419 | INFO     | extracted standard info from prmon json
[2025-04-16 15:59:29] 2025-04-16 13:59:12,419 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 15:59:29] 2025-04-16 13:59:12,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 15:59:29] 2025-04-16 13:59:12,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 15:59:29] 2025-04-16 13:59:12,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 15:59:29] 2025-04-16 13:59:12,422 | INFO     | fitting pss+swap vs Time
[2025-04-16 15:59:29] 2025-04-16 13:59:12,422 | INFO     | sum of square deviations: 41117050.0
[2025-04-16 15:59:29] 2025-04-16 13:59:12,422 | INFO     | sum of deviations: 13709157202.0
[2025-04-16 15:59:29] 2025-04-16 13:59:12,422 | INFO     | mean x: 1744810254.0
[2025-04-16 15:59:29] 2025-04-16 13:59:12,422 | INFO     | mean y: 2483123.156862745
[2025-04-16 15:59:29] 2025-04-16 13:59:12,422 | INFO     | -- intersect: -581748349189.6562
[2025-04-16 15:59:29] 2025-04-16 13:59:12,422 | INFO     | intersect: -581748349189.6562
[2025-04-16 15:59:29] 2025-04-16 13:59:12,423 | INFO     | chi2: 1.7467254451045608
[2025-04-16 15:59:29] 2025-04-16 13:59:12,423 | INFO     | -- intersect: -581748349189.6562
[2025-04-16 15:59:29] 2025-04-16 13:59:12,423 | INFO     | current memory leak: 333.42 B/s (using 51 data points, chi2=1.75)
[2025-04-16 15:59:29] 2025-04-16 13:59:12,423 | INFO     | ..............................
[2025-04-16 15:59:29] 2025-04-16 13:59:12,423 | INFO     | . Timing measurements:
[2025-04-16 15:59:29] 2025-04-16 13:59:12,423 | INFO     | . get job = 25 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,424 | INFO     | . initial setup = 25 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,424 | INFO     | . payload setup = 6 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,424 | INFO     | . stage-in = 0 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,424 | INFO     | . payload execution = 3521 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,424 | INFO     | . stage-out = 0 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,424 | INFO     | . log creation = 0 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,424 | INFO     | ..............................
[2025-04-16 15:59:29] 2025-04-16 13:59:12,520 | INFO     | 
[2025-04-16 15:59:29] 2025-04-16 13:59:12,521 | INFO     | job summary report
[2025-04-16 15:59:29] 2025-04-16 13:59:12,521 | INFO     | --------------------------------------------------
[2025-04-16 15:59:29] 2025-04-16 13:59:12,521 | INFO     | PanDA job id: 6603698420
[2025-04-16 15:59:29] 2025-04-16 13:59:12,521 | INFO     | task id: 44075483
[2025-04-16 15:59:29] 2025-04-16 13:59:12,521 | INFO     | errors: (none)
[2025-04-16 15:59:29] 2025-04-16 13:59:12,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 15:59:29] 2025-04-16 13:59:12,521 | INFO     | pilot state: finished 
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | transexitcode: 0
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | exeerrorcode: 0
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | exeerrordiag: 
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | exitcode: 0
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | exitmsg: OK
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | cpuconsumptiontime: 31786 s
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | nevents: 400
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | neventsw: 0
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | pid: 1637251
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | pgrp: 1637251
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | corecount: 12
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | event service: False
[2025-04-16 15:59:29] 2025-04-16 13:59:12,522 | INFO     | sizes: {0: 2417145, 1: 2417344, 6: 2417550, 11: 2417578, 3531: 2443252, 3532: 2443251, 3534: 2452378, 3535: 2452434, 3541: 2452604}
[2025-04-16 15:59:29] 2025-04-16 13:59:12,523 | INFO     | --------------------------------------------------
[2025-04-16 15:59:29] 2025-04-16 13:59:12,523 | INFO     | 
[2025-04-16 15:59:29] 2025-04-16 13:59:12,523 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-04-16 15:59:29] 2025-04-16 13:59:12,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | job 6603698420 has completed (purged errors)
[2025-04-16 15:59:29] 2025-04-16 13:59:12,548 | INFO     | overall cleanup function is called
[2025-04-16 15:59:29] 2025-04-16 13:59:13,558 | INFO     | --- collectZombieJob: --- 10, [1637251]
[2025-04-16 15:59:29] 2025-04-16 13:59:13,558 | INFO     | zombie collector waiting for pid 1637251
[2025-04-16 15:59:29] 2025-04-16 13:59:13,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 15:59:29] 2025-04-16 13:59:13,558 | INFO     | collected zombie processes
[2025-04-16 15:59:29] 2025-04-16 13:59:13,559 | INFO     | will attempt to kill all subprocesses of pid=1637251
[2025-04-16 15:59:29] 2025-04-16 13:59:13,879 | INFO     | process IDs to be killed: [1637251] (in reverse order)
[2025-04-16 15:59:29] 2025-04-16 13:59:13,992 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 15:59:29] 2025-04-16 13:59:13,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 15:59:29] 2025-04-16 13:59:14,004 | INFO     | did not find any defunct processes belonging to 1637251
[2025-04-16 15:59:29] 2025-04-16 13:59:14,014 | INFO     | did not find any defunct processes belonging to 1637251
[2025-04-16 15:59:29] 2025-04-16 13:59:14,014 | INFO     | ready for new job
[2025-04-16 15:59:29] 2025-04-16 13:59:14,014 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 15:59:29] 2025-04-16 13:59:14,016 | INFO     | **************************************
[2025-04-16 15:59:29] 2025-04-16 13:59:14,016 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 15:59:29] 2025-04-16 13:59:14,016 | INFO     | **************************************
[2025-04-16 15:59:29] 2025-04-16 13:59:14,016 | INFO     | 
[2025-04-16 15:59:29] 2025-04-16 13:59:14,022 | INFO     | architecture information:
[2025-04-16 15:59:29] 2025-04-16 13:59:14,022 | INFO     | executing command: cat /etc/os-release
[2025-04-16 15:59:29] 2025-04-16 13:59:14,043 | INFO     | cat /etc/os-release:
[2025-04-16 15:59:29] NAME="CentOS Linux"
[2025-04-16 15:59:29] VERSION="7 (Core)"
[2025-04-16 15:59:29] ID="centos"
[2025-04-16 15:59:29] ID_LIKE="rhel fedora"
[2025-04-16 15:59:29] VERSION_ID="7"
[2025-04-16 15:59:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 15:59:29] ANSI_COLOR="0;31"
[2025-04-16 15:59:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 15:59:29] HOME_URL="https://www.centos.org/"
[2025-04-16 15:59:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 15:59:29] 
[2025-04-16 15:59:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 15:59:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 15:59:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 15:59:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 15:59:29] 
[2025-04-16 15:59:29] 2025-04-16 13:59:14,044 | INFO     | **************************************
[2025-04-16 15:59:29] 2025-04-16 13:59:14,546 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-04-16 15:59:29] 2025-04-16 13:59:14,568 | INFO     | sufficient remaining disk space (1681005740032 B)
[2025-04-16 15:59:29] 2025-04-16 13:59:14,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 15:59:29] 2025-04-16 13:59:14,568 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 15:59:29] 2025-04-16 13:59:14,568 | INFO     | update_server=False
[2025-04-16 15:59:29] 2025-04-16 13:59:14,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 15:59:29] 2025-04-16 13:59:14,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 15:59:29] 2025-04-16 13:59:14,954 | INFO     | aborting loop
[2025-04-16 15:59:29] 2025-04-16 13:59:15,045 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 15:59:29] 2025-04-16 13:59:15,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 15:59:29] 2025-04-16 13:59:15,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 15:59:29] 2025-04-16 13:59:15,134 | INFO     | all job control threads have been joined
[2025-04-16 15:59:29] 2025-04-16 13:59:15,303 | INFO     | all data control threads have been joined
[2025-04-16 15:59:29] 2025-04-16 13:59:15,574 | INFO     | [job] retrieve thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:15,649 | INFO     | [payload] validate_post thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:15,779 | INFO     | all payload control threads have been joined
[2025-04-16 15:59:29] 2025-04-16 13:59:15,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 15:59:29] 2025-04-16 13:59:15,956 | INFO     | [job] job monitor thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,139 | INFO     | [job] control thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,174 | INFO     | [job] validate thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,241 | INFO     | [data] copytool_in thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,308 | INFO     | [data] control thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,341 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,363 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,538 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,550 | INFO     | [payload] failed_post thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:16,785 | INFO     | [payload] control thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:17,531 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 15:59:29] 2025-04-16 13:59:17,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 15:59:29] 2025-04-16 13:59:17,952 | INFO     | [data] copytool_out thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:18,536 | INFO     | [job] queue monitor thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:21,607 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 15:59:29] 2025-04-16 13:59:23,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671907235648)>', '<ExcThread(monitor, started 139670960715520)>']
[2025-04-16 15:59:29] 2025-04-16 13:59:24,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 15:59:29] 2025-04-16 13:59:24,090 | INFO     | [monitor] control thread has ended
[2025-04-16 15:59:29] 2025-04-16 13:59:28,557 | INFO     | all workflow threads have been joined
[2025-04-16 15:59:29] 2025-04-16 13:59:28,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 15:59:29] 2025-04-16 13:59:28,626 | INFO     | traces error code: 0
[2025-04-16 15:59:29] 2025-04-16 13:59:28,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 15:59:29] 2025-04-16 13:59:28,763 [wrapper] ==== pilot stdout END ====
[2025-04-16 15:59:29] 2025-04-16 13:59:28,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 15:59:29] 2025-04-16 13:59:28,770 [wrapper] pilotpid: 1621055
[2025-04-16 15:59:29] 2025-04-16 13:59:28,774 [wrapper] Pilot exit status: 0
[2025-04-16 15:59:29] 2025-04-16 13:59:28,786 [wrapper] pandaids: 6603698420
[2025-04-16 15:59:29] 2025-04-16 13:59:28,864 [wrapper] cleanup supervisor_pilot 1842745 1621056
[2025-04-16 15:59:29] 2025-04-16 13:59:28,868 [wrapper] Test setup, not cleaning
[2025-04-16 15:59:29] 2025-04-16 13:59:28,872 [wrapper] apfmon messages muted
[2025-04-16 15:59:29] 2025-04-16 13:59:28,875 [wrapper] ==== wrapper stdout END ====
[2025-04-16 15:59:29] 2025-04-16 13:59:28,879 [wrapper] ==== wrapper stderr END ====
[2025-04-16 15:59:29]  *** Error codes and diagnostics ***
[2025-04-16 15:59:29]     "exeErrorCode": 0,
[2025-04-16 15:59:29]     "exeErrorDiag": "",
[2025-04-16 15:59:29]     "pilotErrorCode": 0,
[2025-04-16 15:59:29]     "pilotErrorDiag": "",
[2025-04-16 15:59:29]  *** Listing of results directory ***
[2025-04-16 15:59:29] total 409612
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc    495897 Apr 16 02:40 pilot3.tar.gz
[2025-04-16 15:59:29] -rwx------ 1 boinc boinc     37140 Apr 16 03:01 runpilot2-wrapper.sh
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc      5111 Apr 16 03:01 queuedata.json
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc       100 Apr 16 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 15:59:29] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 14:58 run_atlas
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc       105 Apr 16 14:58 job.xml
[2025-04-16 15:59:29] -rw-r--r-- 2 boinc boinc 226031483 Apr 16 14:58 EVNT.44075481._001341.pool.root.1
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc      6654 Apr 16 14:58 init_data.xml
[2025-04-16 15:59:29] -rw-r--r-- 2 boinc boinc    508887 Apr 16 14:58 input.tar.gz
[2025-04-16 15:59:29] -rw-r--r-- 2 boinc boinc     17569 Apr 16 14:58 start_atlas.sh
[2025-04-16 15:59:29] drwxrwx--x 2 boinc boinc      4096 Apr 16 14:58 shared
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc         0 Apr 16 14:58 boinc_lockfile
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc      2578 Apr 16 14:58 pandaJob.out
[2025-04-16 15:59:29] -rw------- 1 boinc boinc       424 Apr 16 14:58 setup.sh.local
[2025-04-16 15:59:29] -rw------- 1 boinc boinc      4725 Apr 16 14:59 agis_schedconf.agis.BOINC_MCORE.json
[2025-04-16 15:59:29] -rw------- 1 boinc boinc   1603529 Apr 16 14:59 agis_ddmendpoints.agis.ALL.json
[2025-04-16 15:59:29] drwx------ 4 boinc boinc      4096 Apr 16 14:59 pilot3
[2025-04-16 15:59:29] -rw------- 1 boinc boinc        95 Apr 16 15:58 pilot_heartbeat.json
[2025-04-16 15:59:29] -rw------- 1 boinc boinc 189088466 Apr 16 15:58 HITS.44075483._034188.pool.root.1
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc       530 Apr 16 15:58 boinc_task_state.xml
[2025-04-16 15:59:29] -rw------- 1 boinc boinc      1022 Apr 16 15:59 memory_monitor_summary.json
[2025-04-16 15:59:29] -rw------- 1 boinc boinc    361178 Apr 16 15:59 log.44075483._034188.job.log.tgz.1
[2025-04-16 15:59:29] -rw------- 1 boinc boinc      7698 Apr 16 15:59 heartbeat.json
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc      8192 Apr 16 15:59 boinc_mmap_file
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc        27 Apr 16 15:59 wrapper_checkpoint.txt
[2025-04-16 15:59:29] -rw------- 1 boinc boinc      4356 Apr 16 15:59 pilotlog.txt
[2025-04-16 15:59:29] -rw------- 1 boinc boinc    362700 Apr 16 15:59 log.44075483._034188.job.log.1
[2025-04-16 15:59:29] -rw------- 1 boinc boinc       357 Apr 16 15:59 output.list
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc       620 Apr 16 15:59 runtime_log
[2025-04-16 15:59:29] -rw------- 1 boinc boinc    747520 Apr 16 15:59 result.tar.gz
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc     11078 Apr 16 15:59 runtime_log.err
[2025-04-16 15:59:29] -rw------- 1 boinc boinc       661 Apr 16 15:59 GzgLDmVK6O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgFZLDm4IxgDm.diag
[2025-04-16 15:59:29] -rw-r--r-- 1 boinc boinc     21430 Apr 16 15:59 stderr.txt
[2025-04-16 15:59:29] HITS file was successfully produced:
[2025-04-16 15:59:29] -rw------- 1 boinc boinc 189088466 Apr 16 15:58 shared/HITS.pool.root.1
[2025-04-16 15:59:29]  *** Contents of shared directory: ***
[2025-04-16 15:59:29] total 406656
[2025-04-16 15:59:29] -rw-r--r-- 2 boinc boinc 226031483 Apr 16 14:58 ATLAS.root_0
[2025-04-16 15:59:29] -rw-r--r-- 2 boinc boinc    508887 Apr 16 14:58 input.tar.gz
[2025-04-16 15:59:29] -rw-r--r-- 2 boinc boinc     17569 Apr 16 14:58 start_atlas.sh
[2025-04-16 15:59:29] -rw------- 1 boinc boinc 189088466 Apr 16 15:58 HITS.pool.root.1
[2025-04-16 15:59:29] -rw------- 1 boinc boinc    747520 Apr 16 15:59 result.tar.gz
15:59:30 (1617020): run_atlas exited; CPU time 31860.964473
15:59:30 (1617020): called boinc_finish(0)

</stderr_txt>
]]>

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