Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:03:50 (25765): wrapper (7.7.26015): starting
05:03:50 (25765): wrapper: running run_atlas (--nthreads 10)
[2025-04-16 05:03:50] Arguments: --nthreads 10
[2025-04-16 05:03:50] Threads: 10
[2025-04-16 05:03:50] Checking for CVMFS
[2025-04-16 05:03:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 05:03:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 05:03:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 05:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 05:03:52] 2.11.2.0 31127 55202 166020 144919 1 167 16620815 18432000 6245 130560 21 39979521 99.389 60535039 43232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 05:03:52] CVMFS is ok
[2025-04-16 05:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 05:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 05:03:52] Further information can be found at the LHC@home message board.
[2025-04-16 05:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 05:03:52] Checking for apptainer binary...
[2025-04-16 05:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 05:03:52] Running /usr/bin/apptainer --version
[2025-04-16 05:03:52] apptainer version 1.3.2-1.el7
[2025-04-16 05:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 05:03:54] c-210-18.aglt2.org
[2025-04-16 05:03:54] apptainer works
[2025-04-16 05:03:54] Set ATHENA_PROC_NUMBER=10
[2025-04-16 05:03:54] Set ATHENA_CORE_NUMBER=10
[2025-04-16 05:03:54] Starting ATLAS job with PandaID=6603701222
[2025-04-16 05:03:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 12:11:29]  *** The last 200 lines of the pilot log: ***
[2025-04-16 12:11:29] 2025-04-16 16:11:14,644 | INFO     | sum of deviations: 175791578745.24585
[2025-04-16 12:11:29] 2025-04-16 16:11:14,645 | INFO     | mean x: 1744807101.2243438
[2025-04-16 12:11:29] 2025-04-16 16:11:14,645 | INFO     | mean y: 2543744.3484486872
[2025-04-16 12:11:29] 2025-04-16 16:11:14,645 | INFO     | -- intersect: -13443544016.817045
[2025-04-16 12:11:29] 2025-04-16 16:11:14,645 | INFO     | intersect: -13443544016.817045
[2025-04-16 12:11:29] 2025-04-16 16:11:14,646 | INFO     | chi2: 6.573451186191808
[2025-04-16 12:11:29] 2025-04-16 16:11:14,646 | INFO     | sum of square deviations: 22004534408.301945
[2025-04-16 12:11:29] 2025-04-16 16:11:14,651 | INFO     | sum of deviations: 203173384962.76328
[2025-04-16 12:11:29] 2025-04-16 16:11:14,651 | INFO     | mean x: 1744806948.736715
[2025-04-16 12:11:29] 2025-04-16 16:11:14,651 | INFO     | mean y: 2548866.502415459
[2025-04-16 12:11:29] 2025-04-16 16:11:14,652 | INFO     | -- intersect: -16107691291.437153
[2025-04-16 12:11:29] 2025-04-16 16:11:14,652 | INFO     | intersect: -16107691291.437153
[2025-04-16 12:11:29] 2025-04-16 16:11:14,652 | INFO     | chi2: 5.793362442166316
[2025-04-16 12:11:29] 2025-04-16 16:11:14,653 | INFO     | current chi2=5.793362442166316 (change=11.867263054514597 %)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,653 | INFO     | right removable region: 413
[2025-04-16 12:11:29] 2025-04-16 16:11:14,653 | INFO     | sum of square deviations: 22004246791.826054
[2025-04-16 12:11:29] 2025-04-16 16:11:14,658 | INFO     | sum of deviations: 60285672073.91304
[2025-04-16 12:11:29] 2025-04-16 16:11:14,658 | INFO     | mean x: 1744807253.7391305
[2025-04-16 12:11:29] 2025-04-16 16:11:14,658 | INFO     | mean y: 2565543.4806763283
[2025-04-16 12:11:29] 2025-04-16 16:11:14,659 | INFO     | -- intersect: -4777733410.909161
[2025-04-16 12:11:29] 2025-04-16 16:11:14,659 | INFO     | intersect: -4777733410.909161
[2025-04-16 12:11:29] 2025-04-16 16:11:14,659 | INFO     | chi2: 3.7185552764383996
[2025-04-16 12:11:29] 2025-04-16 16:11:14,659 | INFO     | current chi2=3.7185552764383996 (change=43.43070069114384 %)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,660 | INFO     | sum of square deviations: 21216475551.555004
[2025-04-16 12:11:29] 2025-04-16 16:11:14,665 | INFO     | sum of deviations: -26743289454.022007
[2025-04-16 12:11:29] 2025-04-16 16:11:14,665 | INFO     | mean x: 1744807406.2542787
[2025-04-16 12:11:29] 2025-04-16 16:11:14,665 | INFO     | mean y: 2582397.298288509
[2025-04-16 12:11:29] 2025-04-16 16:11:14,665 | INFO     | -- intersect: 2201905720.0430775
[2025-04-16 12:11:29] 2025-04-16 16:11:14,665 | INFO     | intersect: 2201905720.0430775
[2025-04-16 12:11:29] 2025-04-16 16:11:14,666 | INFO     | chi2: 2.1876861074072558
[2025-04-16 12:11:29] 2025-04-16 16:11:14,666 | INFO     | current chi2=2.1876861074072558 (change=41.16838544074024 %)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,667 | INFO     | sum of square deviations: 20447727923.59177
[2025-04-16 12:11:29] 2025-04-16 16:11:14,671 | INFO     | sum of deviations: -105034839652.10892
[2025-04-16 12:11:29] 2025-04-16 16:11:14,671 | INFO     | mean x: 1744807558.769802
[2025-04-16 12:11:29] 2025-04-16 16:11:14,672 | INFO     | mean y: 2597909.1386138615
[2025-04-16 12:11:29] 2025-04-16 16:11:14,672 | INFO     | -- intersect: 8965235853.265858
[2025-04-16 12:11:29] 2025-04-16 16:11:14,672 | INFO     | intersect: 8965235853.265858
[2025-04-16 12:11:29] 2025-04-16 16:11:14,673 | INFO     | chi2: 0.8800486309715911
[2025-04-16 12:11:29] 2025-04-16 16:11:14,673 | INFO     | current chi2=0.8800486309715911 (change=59.77262789246378 %)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,673 | INFO     | sum of square deviations: 19697771345.42862
[2025-04-16 12:11:29] 2025-04-16 16:11:14,678 | INFO     | sum of deviations: -106733082210.14279
[2025-04-16 12:11:29] 2025-04-16 16:11:14,678 | INFO     | mean x: 1744807711.2857144
[2025-04-16 12:11:29] 2025-04-16 16:11:14,678 | INFO     | mean y: 2598243.5012531327
[2025-04-16 12:11:29] 2025-04-16 16:11:14,678 | INFO     | -- intersect: 9456901556.488407
[2025-04-16 12:11:29] 2025-04-16 16:11:14,678 | INFO     | intersect: 9456901556.488407
[2025-04-16 12:11:29] 2025-04-16 16:11:14,679 | INFO     | chi2: 0.8577302125403483
[2025-04-16 12:11:29] 2025-04-16 16:11:14,679 | INFO     | current chi2=0.8577302125403483 (change=2.536043764604559 %)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,679 | INFO     | left removable region: 40
[2025-04-16 12:11:29] 2025-04-16 16:11:14,680 | INFO     | sum of square deviations: 16092335809.860567
[2025-04-16 12:11:29] 2025-04-16 16:11:14,683 | INFO     | sum of deviations: -57372685776.17422
[2025-04-16 12:11:29] 2025-04-16 16:11:14,684 | INFO     | mean x: 1744808138.3592494
[2025-04-16 12:11:29] 2025-04-16 16:11:14,684 | INFO     | mean y: 2599949.9490616624
[2025-04-16 12:11:29] 2025-04-16 16:11:14,684 | INFO     | -- intersect: 6223221383.939885
[2025-04-16 12:11:29] 2025-04-16 16:11:14,684 | INFO     | intersect: 6223221383.939885
[2025-04-16 12:11:29] 2025-04-16 16:11:14,685 | INFO     | chi2: 0.03446159980326689
[2025-04-16 12:11:29] 2025-04-16 16:11:14,685 | INFO     | -- intersect: 6223221383.939885
[2025-04-16 12:11:29] 2025-04-16 16:11:14,685 | INFO     | current memory leak: -3.57 B/s (using 373 data points, chi2=0.03)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | ..............................
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | . Timing measurements:
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | . get job = 0 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | . initial setup = 4 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | . payload setup = 22 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | . stage-in = 0 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | . payload execution = 25533 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,686 | INFO     | . stage-out = 2 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,687 | INFO     | . log creation = 0 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,687 | INFO     | ..............................
[2025-04-16 12:11:29] 2025-04-16 16:11:14,795 | INFO     | 
[2025-04-16 12:11:29] 2025-04-16 16:11:14,795 | INFO     | job summary report
[2025-04-16 12:11:29] 2025-04-16 16:11:14,795 | INFO     | --------------------------------------------------
[2025-04-16 12:11:29] 2025-04-16 16:11:14,795 | INFO     | PanDA job id: 6603701222
[2025-04-16 12:11:29] 2025-04-16 16:11:14,795 | INFO     | task id: 44075483
[2025-04-16 12:11:29] 2025-04-16 16:11:14,795 | INFO     | errors: (none)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | pilot state: finished 
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | transexitcode: 0
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | exeerrorcode: 0
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | exeerrordiag: 
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | exitcode: 0
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | exitmsg: OK
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | cpuconsumptiontime: 52928 s
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | nevents: 400
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | neventsw: 0
[2025-04-16 12:11:29] 2025-04-16 16:11:14,796 | INFO     | pid: 37200
[2025-04-16 12:11:29] 2025-04-16 16:11:14,797 | INFO     | pgrp: 37200
[2025-04-16 12:11:29] 2025-04-16 16:11:14,797 | INFO     | corecount: 10
[2025-04-16 12:11:29] 2025-04-16 16:11:14,797 | INFO     | event service: False
[2025-04-16 12:11:29] 2025-04-16 16:11:14,797 | INFO     | sizes: {0: 2417365, 11: 2417365, 14: 2417599, 21: 2417627, 25559: 2452592, 25563: 2461717, 25570: 2461831}
[2025-04-16 12:11:29] 2025-04-16 16:11:14,797 | INFO     | --------------------------------------------------
[2025-04-16 12:11:29] 2025-04-16 16:11:14,797 | INFO     | 
[2025-04-16 12:11:29] 2025-04-16 16:11:14,797 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-16 12:11:29] 2025-04-16 16:11:14,856 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,858 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 12:11:29] 2025-04-16 16:11:14,859 | INFO     | job 6603701222 has completed (purged errors)
[2025-04-16 12:11:29] 2025-04-16 16:11:14,859 | INFO     | overall cleanup function is called
[2025-04-16 12:11:29] 2025-04-16 16:11:15,868 | INFO     | --- collectZombieJob: --- 10, [37200]
[2025-04-16 12:11:29] 2025-04-16 16:11:15,868 | INFO     | zombie collector waiting for pid 37200
[2025-04-16 12:11:29] 2025-04-16 16:11:15,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 12:11:29] 2025-04-16 16:11:15,868 | INFO     | collected zombie processes
[2025-04-16 12:11:29] 2025-04-16 16:11:15,868 | INFO     | will attempt to kill all subprocesses of pid=37200
[2025-04-16 12:11:29] 2025-04-16 16:11:16,044 | INFO     | process IDs to be killed: [37200] (in reverse order)
[2025-04-16 12:11:29] 2025-04-16 16:11:16,123 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 12:11:29] 2025-04-16 16:11:16,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 12:11:29] 2025-04-16 16:11:16,129 | INFO     | did not find any defunct processes belonging to 37200
[2025-04-16 12:11:29] 2025-04-16 16:11:16,135 | INFO     | did not find any defunct processes belonging to 37200
[2025-04-16 12:11:29] 2025-04-16 16:11:16,136 | INFO     | ready for new job
[2025-04-16 12:11:29] 2025-04-16 16:11:16,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 12:11:29] 2025-04-16 16:11:16,138 | INFO     | **************************************
[2025-04-16 12:11:29] 2025-04-16 16:11:16,139 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 12:11:29] 2025-04-16 16:11:16,139 | INFO     | **************************************
[2025-04-16 12:11:29] 2025-04-16 16:11:16,139 | INFO     | 
[2025-04-16 12:11:29] 2025-04-16 16:11:16,141 | INFO     | architecture information:
[2025-04-16 12:11:29] 2025-04-16 16:11:16,142 | INFO     | executing command: cat /etc/os-release
[2025-04-16 12:11:29] 2025-04-16 16:11:16,160 | INFO     | cat /etc/os-release:
[2025-04-16 12:11:29] NAME="CentOS Linux"
[2025-04-16 12:11:29] VERSION="7 (Core)"
[2025-04-16 12:11:29] ID="centos"
[2025-04-16 12:11:29] ID_LIKE="rhel fedora"
[2025-04-16 12:11:29] VERSION_ID="7"
[2025-04-16 12:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 12:11:29] ANSI_COLOR="0;31"
[2025-04-16 12:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 12:11:29] HOME_URL="https://www.centos.org/"
[2025-04-16 12:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 12:11:29] 
[2025-04-16 12:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 12:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 12:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 12:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 12:11:29] 
[2025-04-16 12:11:29] 2025-04-16 16:11:16,161 | INFO     | **************************************
[2025-04-16 12:11:29] 2025-04-16 16:11:16,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-16 12:11:29] 2025-04-16 16:11:16,682 | INFO     | sufficient remaining disk space (56956551168 B)
[2025-04-16 12:11:29] 2025-04-16 16:11:16,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 12:11:29] 2025-04-16 16:11:16,683 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 12:11:29] 2025-04-16 16:11:16,683 | INFO     | update_server=False
[2025-04-16 12:11:29] 2025-04-16 16:11:16,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 12:11:29] 2025-04-16 16:11:16,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 12:11:29] 2025-04-16 16:11:16,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 12:11:29] 2025-04-16 16:11:16,684 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 12:11:29] 2025-04-16 16:11:16,685 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 12:11:29] 2025-04-16 16:11:16,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 12:11:29] 2025-04-16 16:11:16,685 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 12:11:29] 2025-04-16 16:11:16,684 | INFO     | aborting loop
[2025-04-16 12:11:29] 2025-04-16 16:11:17,141 | INFO     | all job control threads have been joined
[2025-04-16 12:11:29] 2025-04-16 16:11:17,334 | INFO     | all data control threads have been joined
[2025-04-16 12:11:29] 2025-04-16 16:11:17,447 | INFO     | all payload control threads have been joined
[2025-04-16 12:11:29] 2025-04-16 16:11:17,689 | INFO     | [job] retrieve thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:17,689 | INFO     | [job] queue monitor thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:17,690 | INFO     | [job] job monitor thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 12:11:29] 2025-04-16 16:11:18,146 | INFO     | [job] control thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,321 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,321 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,339 | INFO     | [data] control thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 12:11:29] 2025-04-16 16:11:18,452 | INFO     | [payload] control thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,796 | INFO     | [payload] failed_post thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,796 | INFO     | [job] validate thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,873 | INFO     | [data] copytool_in thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:18,880 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:19,253 | INFO     | [payload] validate_post thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:20,120 | INFO     | [data] copytool_out thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:22,458 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 12:11:29] 2025-04-16 16:11:23,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336000390976)>', '<ExcThread(monitor, started 140335430756096)>']
[2025-04-16 12:11:29] 2025-04-16 16:11:23,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 12:11:29] 2025-04-16 16:11:23,717 | INFO     | [monitor] control thread has ended
[2025-04-16 12:11:29] 2025-04-16 16:11:28,647 | INFO     | all workflow threads have been joined
[2025-04-16 12:11:29] 2025-04-16 16:11:28,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 12:11:29] 2025-04-16 16:11:28,647 | INFO     | traces error code: 0
[2025-04-16 12:11:29] 2025-04-16 16:11:28,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 12:11:29] 2025-04-16 16:11:28,861 [wrapper] ==== pilot stdout END ====
[2025-04-16 12:11:29] 2025-04-16 16:11:28,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 12:11:29] 2025-04-16 16:11:28,873 [wrapper] pilotpid: 29626
[2025-04-16 12:11:29] 2025-04-16 16:11:28,910 [wrapper] Pilot exit status: 0
[2025-04-16 12:11:29] 2025-04-16 16:11:28,979 [wrapper] pandaids: 6603701222
[2025-04-16 12:11:29] 2025-04-16 16:11:29,045 [wrapper] cleanup supervisor_pilot 13585 29627
[2025-04-16 12:11:29] 2025-04-16 16:11:29,096 [wrapper] Test setup, not cleaning
[2025-04-16 12:11:29] 2025-04-16 16:11:29,101 [wrapper] apfmon messages muted
[2025-04-16 12:11:29] 2025-04-16 16:11:29,103 [wrapper] ==== wrapper stdout END ====
[2025-04-16 12:11:29] 2025-04-16 16:11:29,106 [wrapper] ==== wrapper stderr END ====
[2025-04-16 12:11:29]  *** Error codes and diagnostics ***
[2025-04-16 12:11:29]     "exeErrorCode": 0,
[2025-04-16 12:11:29]     "exeErrorDiag": "",
[2025-04-16 12:11:29]     "pilotErrorCode": 0,
[2025-04-16 12:11:29]     "pilotErrorDiag": "",
[2025-04-16 12:11:29]  *** Listing of results directory ***
[2025-04-16 12:11:29] total 414136
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 00:41 pilot3.tar.gz
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 01:24 queuedata.json
[2025-04-16 12:11:29] -rwx------ 1 boincer umatlas     37140 Apr 16 01:26 runpilot2-wrapper.sh
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas       100 Apr 16 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 12:11:29] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 05:03 run_atlas
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas       105 Apr 16 05:03 job.xml
[2025-04-16 12:11:29] -rw-r--r-- 2 boincer umatlas 222315823 Apr 16 05:03 EVNT.44075481._001429.pool.root.1
[2025-04-16 12:11:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 05:03 start_atlas.sh
[2025-04-16 12:11:29] drwxrwx--x 2 boincer umatlas      4096 Apr 16 05:03 shared
[2025-04-16 12:11:29] -rw-r--r-- 2 boincer umatlas    508895 Apr 16 05:03 input.tar.gz
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas         0 Apr 16 05:03 boinc_lockfile
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas      2578 Apr 16 05:03 pandaJob.out
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas       467 Apr 16 05:03 setup.sh.local
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas    985396 Apr 16 05:04 agis_schedconf.cvmfs.json
[2025-04-16 12:11:29] drwx------ 4 boincer umatlas      4096 Apr 16 05:04 pilot3
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas 192794612 Apr 16 12:10 HITS.44075483._036379.pool.root.1
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas       531 Apr 16 12:10 boinc_task_state.xml
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas        95 Apr 16 12:10 pilot_heartbeat.json
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas      1059 Apr 16 12:11 memory_monitor_summary.json
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas      6229 Apr 16 12:11 init_data.xml
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas   1603529 Apr 16 12:11 agis_ddmendpoints.agis.ALL.json
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas    509849 Apr 16 12:11 log.44075483._036379.job.log.tgz.1
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas      7754 Apr 16 12:11 heartbeat.json
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 12:11 boinc_mmap_file
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas        28 Apr 16 12:11 wrapper_checkpoint.txt
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas      4476 Apr 16 12:11 pilotlog.txt
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas   2053922 Apr 16 12:11 log.44075483._036379.job.log.1
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas       357 Apr 16 12:11 output.list
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas       620 Apr 16 12:11 runtime_log
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas   2580480 Apr 16 12:11 result.tar.gz
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas     11421 Apr 16 12:11 runtime_log.err
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas       663 Apr 16 12:11 67bKDmYTAP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmxB2KDmVYlhVn.diag
[2025-04-16 12:11:29] -rw-r--r-- 1 boincer umatlas     20816 Apr 16 12:11 stderr.txt
[2025-04-16 12:11:29] HITS file was successfully produced:
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas 192794612 Apr 16 12:10 shared/HITS.pool.root.1
[2025-04-16 12:11:29]  *** Contents of shared directory: ***
[2025-04-16 12:11:29] total 408428
[2025-04-16 12:11:29] -rw-r--r-- 2 boincer umatlas 222315823 Apr 16 05:03 ATLAS.root_0
[2025-04-16 12:11:29] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 05:03 start_atlas.sh
[2025-04-16 12:11:29] -rw-r--r-- 2 boincer umatlas    508895 Apr 16 05:03 input.tar.gz
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas 192794612 Apr 16 12:10 HITS.pool.root.1
[2025-04-16 12:11:29] -rw------- 1 boincer umatlas   2580480 Apr 16 12:11 result.tar.gz
12:11:30 (25765): run_atlas exited; CPU time 53364.289563
12:11:30 (25765): called boinc_finish(0)

</stderr_txt>
]]>

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