Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:17 (8814): wrapper (7.7.26015): starting
04:04:17 (8814): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 04:04:17] Arguments: --nthreads 12
[2025-04-16 04:04:17] Threads: 12
[2025-04-16 04:04:17] Checking for CVMFS
[2025-04-16 04:04:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 04:04:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 04:04:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 04:04:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 04:04:17] 2.11.2.0 2970 8364 90896 144918 3 56 14918506 20275201 1 130560 0 7300416 99.993 1468465 59888 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 04:04:17] CVMFS is ok
[2025-04-16 04:04:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 04:04:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 04:04:17] Further information can be found at the LHC@home message board.
[2025-04-16 04:04:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 04:04:17] Checking for apptainer binary...
[2025-04-16 04:04:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 04:04:17] Running /usr/bin/apptainer --version
[2025-04-16 04:04:17] apptainer version 1.3.2-1.el7
[2025-04-16 04:04:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 04:04:19] c-115-42.aglt2.org
[2025-04-16 04:04:19] apptainer works
[2025-04-16 04:04:19] Set ATHENA_PROC_NUMBER=12
[2025-04-16 04:04:19] Set ATHENA_CORE_NUMBER=12
[2025-04-16 04:04:19] Starting ATLAS job with PandaID=6603700568
[2025-04-16 04:04:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 05:19:43]  *** The last 200 lines of the pilot log: ***
[2025-04-16 05:19:43]  protocol_id=None
[2025-04-16 05:19:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 05:19:43]  replicas=None
[2025-04-16 05:19:43]  scope=mc23_13p6TeV
[2025-04-16 05:19:43]  status=None
[2025-04-16 05:19:43]  status_code=0
[2025-04-16 05:19:43]  storage_token=
[2025-04-16 05:19:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603700568/log.44075483._036001.job.log.tgz.1
[2025-04-16 05:19:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/e0/log.44075483._036001.job.log.tgz.1
[2025-04-16 05:19:43]  workdir=None
[2025-04-16 05:19:43] ]
[2025-04-16 05:19:43] 2025-04-16 09:19:12,577 | INFO     | transferring file log.44075483._036001.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603700568/log.44075483._036001.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-16 05:19:43] 2025-04-16 09:19:12,578 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603700568/log.44075483._036001.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._036001.job
[2025-04-16 05:19:43] 2025-04-16 09:19:12,600 | INFO     | adding to output.list: log.44075483._036001.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/e0/log.44075483._036001.job.log.tg
[2025-04-16 05:19:43] 2025-04-16 09:19:12,601 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 05:19:43] 2025-04-16 09:19:12,601 | INFO     | summary of transferred files:
[2025-04-16 05:19:43] 2025-04-16 09:19:12,601 | INFO     |  -- lfn=log.44075483._036001.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 05:19:43] 2025-04-16 09:19:12,602 | INFO     | stage-out finished correctly
[2025-04-16 05:19:43] 2025-04-16 09:19:14,517 | WARNING  | process 21706 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 05:19:43] 2025-04-16 09:19:14,517 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603700568/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 05:19:43] 2025-04-16 09:19:14,598 | INFO     | number of running child processes to parent process 21706: 1
[2025-04-16 05:19:43] 2025-04-16 09:19:14,599 | INFO     | maximum number of monitored processes: 6
[2025-04-16 05:19:43] 2025-04-16 09:19:15,510 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 05:19:43] 2025-04-16 09:19:17,100 | INFO     | monitor loop #335: job 0:6603700568 is in state 'finished'
[2025-04-16 05:19:43] 2025-04-16 09:19:17,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 05:19:43] 2025-04-16 09:19:17,356 | INFO     | job 6603700568 has state=finished
[2025-04-16 05:19:43] 2025-04-16 09:19:17,356 | INFO     | preparing for final server update for job 6603700568 in state='finished'
[2025-04-16 05:19:43] 2025-04-16 09:19:17,356 | INFO     | this job has now completed (state=finished)
[2025-04-16 05:19:43] 2025-04-16 09:19:17,357 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 05:19:43] 2025-04-16 09:19:17,357 | INFO     | log transfer has been attempted: DONE
[2025-04-16 05:19:43] 2025-04-16 09:19:17,357 | INFO     | job 6603700568 has finished - writing final server update
[2025-04-16 05:19:43] 2025-04-16 09:19:17,357 | INFO     | total number of processed events: 400 (read)
[2025-04-16 05:19:43] 2025-04-16 09:19:17,359 | INFO     | executing command: lscpu
[2025-04-16 05:19:43] 2025-04-16 09:19:17,390 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 05:19:43] 2025-04-16 09:19:19,611 | INFO     | monitor loop #336: job 0:6603700568 is in state 'finished'
[2025-04-16 05:19:43] 2025-04-16 09:19:19,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 05:19:43] 2025-04-16 09:19:22,114 | INFO     | monitor loop #337: job 0:6603700568 is in state 'finished'
[2025-04-16 05:19:43] 2025-04-16 09:19:22,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 05:19:43] 2025-04-16 09:19:22,959 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-16 05:19:43] 2025-04-16 09:19:22,959 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603700568/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 05:19:43] 2025-04-16 09:19:22,960 | INFO     | extracted standard info from prmon json
[2025-04-16 05:19:43] 2025-04-16 09:19:22,961 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 05:19:43] 2025-04-16 09:19:22,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 05:19:43] 2025-04-16 09:19:22,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 05:19:43] 2025-04-16 09:19:22,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 05:19:43] 2025-04-16 09:19:22,964 | INFO     | fitting pss+swap vs Time
[2025-04-16 05:19:43] 2025-04-16 09:19:22,964 | INFO     | sum of square deviations: 89127252.5
[2025-04-16 05:19:43] 2025-04-16 09:19:22,965 | INFO     | sum of deviations: 22755303909.000004
[2025-04-16 05:19:43] 2025-04-16 09:19:22,965 | INFO     | mean x: 1744792987.5
[2025-04-16 05:19:43] 2025-04-16 09:19:22,965 | INFO     | mean y: 2590233.515151515
[2025-04-16 05:19:43] 2025-04-16 09:19:22,965 | INFO     | -- intersect: -445464913534.2527
[2025-04-16 05:19:43] 2025-04-16 09:19:22,965 | INFO     | intersect: -445464913534.2527
[2025-04-16 05:19:43] 2025-04-16 09:19:22,966 | INFO     | chi2: 1.8819505051003569
[2025-04-16 05:19:43] 2025-04-16 09:19:22,966 | INFO     | -- intersect: -445464913534.2527
[2025-04-16 05:19:43] 2025-04-16 09:19:22,966 | INFO     | current memory leak: 255.31 B/s (using 66 data points, chi2=1.88)
[2025-04-16 05:19:43] 2025-04-16 09:19:22,967 | INFO     | ..............................
[2025-04-16 05:19:43] 2025-04-16 09:19:22,967 | INFO     | . Timing measurements:
[2025-04-16 05:19:43] 2025-04-16 09:19:22,967 | INFO     | . get job = 0 s
[2025-04-16 05:19:43] 2025-04-16 09:19:22,967 | INFO     | . initial setup = 2 s
[2025-04-16 05:19:43] 2025-04-16 09:19:22,967 | INFO     | . payload setup = 7 s
[2025-04-16 05:19:43] 2025-04-16 09:19:22,968 | INFO     | . stage-in = 0 s
[2025-04-16 05:19:43] 2025-04-16 09:19:22,968 | INFO     | . payload execution = 4453 s
[2025-04-16 05:19:43] 2025-04-16 09:19:22,968 | INFO     | . stage-out = 0 s
[2025-04-16 05:19:43] 2025-04-16 09:19:22,968 | INFO     | . log creation = 0 s
[2025-04-16 05:19:43] 2025-04-16 09:19:22,968 | INFO     | ..............................
[2025-04-16 05:19:43] 2025-04-16 09:19:23,385 | INFO     | 
[2025-04-16 05:19:43] 2025-04-16 09:19:23,385 | INFO     | job summary report
[2025-04-16 05:19:43] 2025-04-16 09:19:23,385 | INFO     | --------------------------------------------------
[2025-04-16 05:19:43] 2025-04-16 09:19:23,385 | INFO     | PanDA job id: 6603700568
[2025-04-16 05:19:43] 2025-04-16 09:19:23,385 | INFO     | task id: 44075483
[2025-04-16 05:19:43] 2025-04-16 09:19:23,386 | INFO     | errors: (none)
[2025-04-16 05:19:43] 2025-04-16 09:19:23,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 05:19:43] 2025-04-16 09:19:23,386 | INFO     | pilot state: finished 
[2025-04-16 05:19:43] 2025-04-16 09:19:23,386 | INFO     | transexitcode: 0
[2025-04-16 05:19:43] 2025-04-16 09:19:23,386 | INFO     | exeerrorcode: 0
[2025-04-16 05:19:43] 2025-04-16 09:19:23,386 | INFO     | exeerrordiag: 
[2025-04-16 05:19:43] 2025-04-16 09:19:23,387 | INFO     | exitcode: 0
[2025-04-16 05:19:43] 2025-04-16 09:19:23,387 | INFO     | exitmsg: OK
[2025-04-16 05:19:43] 2025-04-16 09:19:23,387 | INFO     | cpuconsumptiontime: 41482 s
[2025-04-16 05:19:43] 2025-04-16 09:19:23,387 | INFO     | nevents: 400
[2025-04-16 05:19:43] 2025-04-16 09:19:23,387 | INFO     | neventsw: 0
[2025-04-16 05:19:43] 2025-04-16 09:19:23,387 | INFO     | pid: 21706
[2025-04-16 05:19:43] 2025-04-16 09:19:23,387 | INFO     | pgrp: 21706
[2025-04-16 05:19:43] 2025-04-16 09:19:23,388 | INFO     | corecount: 12
[2025-04-16 05:19:43] 2025-04-16 09:19:23,388 | INFO     | event service: False
[2025-04-16 05:19:43] 2025-04-16 09:19:23,388 | INFO     | sizes: {0: 2417315, 5: 2417521, 11: 2417577, 4465: 2443530, 4466: 2452471, 4468: 2452527, 4476: 2452825}
[2025-04-16 05:19:43] 2025-04-16 09:19:23,388 | INFO     | --------------------------------------------------
[2025-04-16 05:19:43] 2025-04-16 09:19:23,388 | INFO     | 
[2025-04-16 05:19:43] 2025-04-16 09:19:23,389 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-16 05:19:43] 2025-04-16 09:19:23,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 05:19:43] 2025-04-16 09:19:23,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 05:19:43] 2025-04-16 09:19:23,416 | INFO     | job 6603700568 has completed (purged errors)
[2025-04-16 05:19:43] 2025-04-16 09:19:23,416 | INFO     | overall cleanup function is called
[2025-04-16 05:19:43] 2025-04-16 09:19:24,424 | INFO     | --- collectZombieJob: --- 10, [21706]
[2025-04-16 05:19:43] 2025-04-16 09:19:24,424 | INFO     | zombie collector waiting for pid 21706
[2025-04-16 05:19:43] 2025-04-16 09:19:24,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 05:19:43] 2025-04-16 09:19:24,424 | INFO     | collected zombie processes
[2025-04-16 05:19:43] 2025-04-16 09:19:24,424 | INFO     | will attempt to kill all subprocesses of pid=21706
[2025-04-16 05:19:43] 2025-04-16 09:19:24,514 | INFO     | process IDs to be killed: [21706] (in reverse order)
[2025-04-16 05:19:43] 2025-04-16 09:19:24,564 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 05:19:43] 2025-04-16 09:19:24,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 05:19:43] 2025-04-16 09:19:24,568 | INFO     | did not find any defunct processes belonging to 21706
[2025-04-16 05:19:43] 2025-04-16 09:19:24,571 | INFO     | did not find any defunct processes belonging to 21706
[2025-04-16 05:19:43] 2025-04-16 09:19:24,571 | INFO     | ready for new job
[2025-04-16 05:19:43] 2025-04-16 09:19:24,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 05:19:43] 2025-04-16 09:19:24,573 | INFO     | **************************************
[2025-04-16 05:19:43] 2025-04-16 09:19:24,573 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 05:19:43] 2025-04-16 09:19:24,573 | INFO     | **************************************
[2025-04-16 05:19:43] 2025-04-16 09:19:24,573 | INFO     | 
[2025-04-16 05:19:43] 2025-04-16 09:19:24,574 | INFO     | architecture information:
[2025-04-16 05:19:43] 2025-04-16 09:19:24,574 | INFO     | executing command: cat /etc/os-release
[2025-04-16 05:19:43] 2025-04-16 09:19:24,590 | INFO     | cat /etc/os-release:
[2025-04-16 05:19:43] NAME="CentOS Linux"
[2025-04-16 05:19:43] VERSION="7 (Core)"
[2025-04-16 05:19:43] ID="centos"
[2025-04-16 05:19:43] ID_LIKE="rhel fedora"
[2025-04-16 05:19:43] VERSION_ID="7"
[2025-04-16 05:19:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 05:19:43] ANSI_COLOR="0;31"
[2025-04-16 05:19:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 05:19:43] HOME_URL="https://www.centos.org/"
[2025-04-16 05:19:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 05:19:43] 
[2025-04-16 05:19:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 05:19:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 05:19:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 05:19:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 05:19:43] 
[2025-04-16 05:19:43] 2025-04-16 09:19:24,591 | INFO     | **************************************
[2025-04-16 05:19:43] 2025-04-16 09:19:25,094 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-16 05:19:43] 2025-04-16 09:19:25,111 | INFO     | sufficient remaining disk space (18624806912 B)
[2025-04-16 05:19:43] 2025-04-16 09:19:25,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 05:19:43] 2025-04-16 09:19:25,112 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 05:19:43] 2025-04-16 09:19:25,112 | INFO     | update_server=False
[2025-04-16 05:19:43] 2025-04-16 09:19:25,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 05:19:43] 2025-04-16 09:19:25,112 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 05:19:43] 2025-04-16 09:19:25,113 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 05:19:43] 2025-04-16 09:19:25,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 05:19:43] 2025-04-16 09:19:25,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 05:19:43] 2025-04-16 09:19:25,325 | INFO     | all data control threads have been joined
[2025-04-16 05:19:43] 2025-04-16 09:19:25,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 05:19:43] 2025-04-16 09:19:25,627 | INFO     | aborting loop
[2025-04-16 05:19:43] 2025-04-16 09:19:25,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 05:19:43] 2025-04-16 09:19:25,724 | INFO     | all payload control threads have been joined
[2025-04-16 05:19:43] 2025-04-16 09:19:26,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 05:19:43] 2025-04-16 09:19:26,113 | INFO     | [job] retrieve thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,238 | INFO     | all job control threads have been joined
[2025-04-16 05:19:43] 2025-04-16 09:19:26,268 | INFO     | [data] copytool_in thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,269 | INFO     | [job] validate thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,275 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,327 | INFO     | [data] control thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,333 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,433 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,606 | INFO     | [payload] failed_post thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,632 | INFO     | [job] job monitor thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:26,729 | INFO     | [payload] control thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:27,243 | INFO     | [job] control thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:27,318 | INFO     | [payload] validate_post thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:27,701 | INFO     | [data] copytool_out thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:28,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 05:19:43] 2025-04-16 09:19:29,060 | INFO     | [job] queue monitor thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:29,231 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-04-16 05:19:43] 2025-04-16 09:19:30,100 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:35,982 | INFO     | job.realtimelogging is not enabled
[2025-04-16 05:19:43] 2025-04-16 09:19:36,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 05:19:43] 2025-04-16 09:19:37,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881034655552)>', '<ExcThread(monitor, started 139879769962240)>']
[2025-04-16 05:19:43] 2025-04-16 09:19:38,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 05:19:43] 2025-04-16 09:19:38,171 | INFO     | [monitor] control thread has ended
[2025-04-16 05:19:43] 2025-04-16 09:19:42,787 | INFO     | all workflow threads have been joined
[2025-04-16 05:19:43] 2025-04-16 09:19:42,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 05:19:43] 2025-04-16 09:19:42,787 | INFO     | traces error code: 0
[2025-04-16 05:19:43] 2025-04-16 09:19:42,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 05:19:43] 2025-04-16 09:19:42,867 [wrapper] ==== pilot stdout END ====
[2025-04-16 05:19:43] 2025-04-16 09:19:42,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 05:19:43] 2025-04-16 09:19:42,875 [wrapper] pilotpid: 12850
[2025-04-16 05:19:43] 2025-04-16 09:19:42,878 [wrapper] Pilot exit status: 0
[2025-04-16 05:19:43] 2025-04-16 09:19:42,893 [wrapper] pandaids: 6603700568
[2025-04-16 05:19:43] 2025-04-16 09:19:42,932 [wrapper] cleanup supervisor_pilot 20427 12851
[2025-04-16 05:19:43] 2025-04-16 09:19:42,935 [wrapper] Test setup, not cleaning
[2025-04-16 05:19:43] 2025-04-16 09:19:42,939 [wrapper] apfmon messages muted
[2025-04-16 05:19:43] 2025-04-16 09:19:42,943 [wrapper] ==== wrapper stdout END ====
[2025-04-16 05:19:43] 2025-04-16 09:19:42,946 [wrapper] ==== wrapper stderr END ====
[2025-04-16 05:19:43]  *** Error codes and diagnostics ***
[2025-04-16 05:19:43]     "exeErrorCode": 0,
[2025-04-16 05:19:43]     "exeErrorDiag": "",
[2025-04-16 05:19:43]     "pilotErrorCode": 0,
[2025-04-16 05:19:43]     "pilotErrorDiag": "",
[2025-04-16 05:19:43]  *** Listing of results directory ***
[2025-04-16 05:19:43] total 412572
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 00:39 queuedata.json
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 00:41 pilot3.tar.gz
[2025-04-16 05:19:43] -rwx------ 1 boincer umatlas     37140 Apr 16 00:43 runpilot2-wrapper.sh
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas       100 Apr 16 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 05:19:43] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 04:04 run_atlas
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas       105 Apr 16 04:04 job.xml
[2025-04-16 05:19:43] -rw-r--r-- 2 boincer umatlas 223308574 Apr 16 04:04 EVNT.44075481._001414.pool.root.1
[2025-04-16 05:19:43] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 04:04 start_atlas.sh
[2025-04-16 05:19:43] drwxrwx--x 2 boincer umatlas      4096 Apr 16 04:04 shared
[2025-04-16 05:19:43] -rw-r--r-- 2 boincer umatlas    508890 Apr 16 04:04 input.tar.gz
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas         0 Apr 16 04:04 boinc_lockfile
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas      2578 Apr 16 04:04 pandaJob.out
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas       424 Apr 16 04:04 setup.sh.local
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas    985908 Apr 16 04:04 agis_schedconf.cvmfs.json
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas   1603529 Apr 16 04:04 agis_ddmendpoints.agis.ALL.json
[2025-04-16 05:19:43] drwx------ 4 boincer umatlas      4096 Apr 16 04:04 pilot3
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas      5868 Apr 16 05:18 init_data.xml
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas 193750157 Apr 16 05:18 HITS.44075483._036001.pool.root.1
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas       529 Apr 16 05:19 boinc_task_state.xml
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas      1049 Apr 16 05:19 memory_monitor_summary.json
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas    354417 Apr 16 05:19 log.44075483._036001.job.log.tgz.1
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 05:19 boinc_mmap_file
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas        27 Apr 16 05:19 wrapper_checkpoint.txt
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas      7751 Apr 16 05:19 heartbeat.json
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas        95 Apr 16 05:19 pilot_heartbeat.json
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas      4548 Apr 16 05:19 pilotlog.txt
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas    431694 Apr 16 05:19 log.44075483._036001.job.log.1
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas       357 Apr 16 05:19 output.list
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas       620 Apr 16 05:19 runtime_log
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas    808960 Apr 16 05:19 result.tar.gz
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas     11015 Apr 16 05:19 runtime_log.err
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas       658 Apr 16 05:19 kxPLDmLn9O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgZZLDmekSQ7m.diag
[2025-04-16 05:19:43] -rw-r--r-- 1 boincer umatlas     21700 Apr 16 05:19 stderr.txt
[2025-04-16 05:19:43] HITS file was successfully produced:
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas 193750157 Apr 16 05:18 shared/HITS.pool.root.1
[2025-04-16 05:19:43]  *** Contents of shared directory: ***
[2025-04-16 05:19:43] total 408600
[2025-04-16 05:19:43] -rw-r--r-- 2 boincer umatlas 223308574 Apr 16 04:04 ATLAS.root_0
[2025-04-16 05:19:43] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 04:04 start_atlas.sh
[2025-04-16 05:19:43] -rw-r--r-- 2 boincer umatlas    508890 Apr 16 04:04 input.tar.gz
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas 193750157 Apr 16 05:18 HITS.pool.root.1
[2025-04-16 05:19:43] -rw------- 1 boincer umatlas    808960 Apr 16 05:19 result.tar.gz
05:19:44 (8814): run_atlas exited; CPU time 41479.919961
05:19:44 (8814): called boinc_finish(0)

</stderr_txt>
]]>

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