Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:34:23 (1342587): wrapper (7.7.26015): starting
13:34:23 (1342587): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 13:34:23] Arguments: --nthreads 12
[2025-04-16 13:34:23] Threads: 12
[2025-04-16 13:34:23] Checking for CVMFS
[2025-04-16 13:34:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 13:34:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 13:34:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 13:34:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 13:34:24] 2.12.7.0 9969 22213 340004 144922 3 187 28534848 46080001 6400 130560 132 228035247 99.950 41179742 3709 http://sampacs01.if.usp.br:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-16 13:34:24] CVMFS is ok
[2025-04-16 13:34:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 13:34:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 13:34:24] Further information can be found at the LHC@home message board.
[2025-04-16 13:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 13:34:24] Checking for apptainer binary...
[2025-04-16 13:34:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 13:34:24] Running /usr/bin/apptainer --version
[2025-04-16 13:34:24] apptainer version 1.4.0-1.el9
[2025-04-16 13:34:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 13:34:24] mff2104.farm.particle.cz
[2025-04-16 13:34:24] apptainer works
[2025-04-16 13:34:24] Set ATHENA_PROC_NUMBER=12
[2025-04-16 13:34:24] Set ATHENA_CORE_NUMBER=12
[2025-04-16 13:34:24] Starting ATLAS job with PandaID=6603696514
[2025-04-16 13:34:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 14:32:45]  *** The last 200 lines of the pilot log: ***
[2025-04-16 14:32:45]  mtime=0
[2025-04-16 14:32:45]  protocol_id=None
[2025-04-16 14:32:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 14:32:45]  replicas=None
[2025-04-16 14:32:45]  scope=mc23_13p6TeV
[2025-04-16 14:32:45]  status=None
[2025-04-16 14:32:45]  status_code=0
[2025-04-16 14:32:45]  storage_token=
[2025-04-16 14:32:45]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6603696514/log.44075483._033218.job.log.tgz.1
[2025-04-16 14:32:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/e7/log.44075483._033218.job.log.tgz.1
[2025-04-16 14:32:45]  workdir=None
[2025-04-16 14:32:45] ]
[2025-04-16 14:32:45] 2025-04-16 12:32:17,124 | INFO     | transferring file log.44075483._033218.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6603696514/log.44075483._033218.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-16 14:32:45] 2025-04-16 12:32:17,124 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6603696514/log.44075483._033218.job.log.tgz.1 /scratch/.boinc/slots/1/log.44075483._033218.j
[2025-04-16 14:32:45] 2025-04-16 12:32:17,149 | INFO     | adding to output.list: log.44075483._033218.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/e7/log.44075483._033218.job.log.tg
[2025-04-16 14:32:45] 2025-04-16 12:32:17,150 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 14:32:45] 2025-04-16 12:32:17,150 | INFO     | summary of transferred files:
[2025-04-16 14:32:45] 2025-04-16 12:32:17,150 | INFO     |  -- lfn=log.44075483._033218.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 14:32:45] 2025-04-16 12:32:17,151 | INFO     | stage-out finished correctly
[2025-04-16 14:32:45] 2025-04-16 12:32:19,431 | WARNING  | process 1355140 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 14:32:45] 2025-04-16 12:32:19,432 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6603696514/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 14:32:45] 2025-04-16 12:32:19,543 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 14:32:45] 2025-04-16 12:32:19,638 | INFO     | job 6603696514 has state=finished
[2025-04-16 14:32:45] 2025-04-16 12:32:19,638 | INFO     | preparing for final server update for job 6603696514 in state='finished'
[2025-04-16 14:32:45] 2025-04-16 12:32:19,639 | INFO     | this job has now completed (state=finished)
[2025-04-16 14:32:45] 2025-04-16 12:32:19,639 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 14:32:45] 2025-04-16 12:32:19,640 | INFO     | log transfer has been attempted: DONE
[2025-04-16 14:32:45] 2025-04-16 12:32:19,640 | INFO     | job 6603696514 has finished - writing final server update
[2025-04-16 14:32:45] 2025-04-16 12:32:19,640 | INFO     | total number of processed events: 400 (read)
[2025-04-16 14:32:45] 2025-04-16 12:32:19,648 | INFO     | executing command: lscpu
[2025-04-16 14:32:45] 2025-04-16 12:32:19,739 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 14:32:45] 2025-04-16 12:32:19,906 | INFO     | number of running child processes to parent process 1355140: 1
[2025-04-16 14:32:45] 2025-04-16 12:32:19,906 | INFO     | maximum number of monitored processes: 6
[2025-04-16 14:32:45] 2025-04-16 12:32:22,412 | INFO     | monitor loop #251: job 0:6603696514 is in state 'finished'
[2025-04-16 14:32:45] 2025-04-16 12:32:22,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 14:32:45] 2025-04-16 12:32:24,915 | INFO     | monitor loop #252: job 0:6603696514 is in state 'finished'
[2025-04-16 14:32:45] 2025-04-16 12:32:24,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 14:32:45] 2025-04-16 12:32:25,221 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-16 14:32:45] 2025-04-16 12:32:25,222 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6603696514/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 14:32:45] 2025-04-16 12:32:25,222 | INFO     | extracted standard info from prmon json
[2025-04-16 14:32:45] 2025-04-16 12:32:25,222 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 14:32:45] 2025-04-16 12:32:25,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 14:32:45] 2025-04-16 12:32:25,223 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 14:32:45] 2025-04-16 12:32:25,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 14:32:45] 2025-04-16 12:32:25,225 | INFO     | fitting pss+swap vs Time
[2025-04-16 14:32:45] 2025-04-16 12:32:25,225 | INFO     | sum of square deviations: 36465800.0
[2025-04-16 14:32:45] 2025-04-16 12:32:25,225 | INFO     | sum of deviations: 11844635533.000002
[2025-04-16 14:32:45] 2025-04-16 12:32:25,225 | INFO     | mean x: 1744805119.0
[2025-04-16 14:32:45] 2025-04-16 12:32:25,225 | INFO     | mean y: 2507859.4285714286
[2025-04-16 14:32:45] 2025-04-16 12:32:25,225 | INFO     | -- intersect: -566736209258.1912
[2025-04-16 14:32:45] 2025-04-16 12:32:25,226 | INFO     | intersect: -566736209258.1912
[2025-04-16 14:32:45] 2025-04-16 12:32:25,226 | INFO     | chi2: 1.5192328178992278
[2025-04-16 14:32:45] 2025-04-16 12:32:25,226 | INFO     | -- intersect: -566736209258.1912
[2025-04-16 14:32:45] 2025-04-16 12:32:25,226 | INFO     | current memory leak: 324.81 B/s (using 49 data points, chi2=1.52)
[2025-04-16 14:32:45] 2025-04-16 12:32:25,226 | INFO     | ..............................
[2025-04-16 14:32:45] 2025-04-16 12:32:25,226 | INFO     | . Timing measurements:
[2025-04-16 14:32:45] 2025-04-16 12:32:25,226 | INFO     | . get job = 18 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,227 | INFO     | . initial setup = 26 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,227 | INFO     | . payload setup = 7 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,227 | INFO     | . stage-in = 0 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,227 | INFO     | . payload execution = 3388 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,227 | INFO     | . stage-out = 0 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,227 | INFO     | . log creation = 0 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,227 | INFO     | ..............................
[2025-04-16 14:32:45] 2025-04-16 12:32:25,323 | INFO     | 
[2025-04-16 14:32:45] 2025-04-16 12:32:25,323 | INFO     | job summary report
[2025-04-16 14:32:45] 2025-04-16 12:32:25,323 | INFO     | --------------------------------------------------
[2025-04-16 14:32:45] 2025-04-16 12:32:25,323 | INFO     | PanDA job id: 6603696514
[2025-04-16 14:32:45] 2025-04-16 12:32:25,323 | INFO     | task id: 44075483
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | errors: (none)
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | pilot state: finished 
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | transexitcode: 0
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | exeerrorcode: 0
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | exeerrordiag: 
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | exitcode: 0
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | exitmsg: OK
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | cpuconsumptiontime: 29571 s
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | nevents: 400
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | neventsw: 0
[2025-04-16 14:32:45] 2025-04-16 12:32:25,324 | INFO     | pid: 1355140
[2025-04-16 14:32:45] 2025-04-16 12:32:25,325 | INFO     | pgrp: 1355140
[2025-04-16 14:32:45] 2025-04-16 12:32:25,325 | INFO     | corecount: 12
[2025-04-16 14:32:45] 2025-04-16 12:32:25,325 | INFO     | event service: False
[2025-04-16 14:32:45] 2025-04-16 12:32:25,325 | INFO     | sizes: {0: 2416531, 1: 2417388, 7: 2417594, 12: 2417622, 3399: 2443070, 3400: 2452013, 3403: 2452197, 3408: 2452367}
[2025-04-16 14:32:45] 2025-04-16 12:32:25,325 | INFO     | --------------------------------------------------
[2025-04-16 14:32:45] 2025-04-16 12:32:25,325 | INFO     | 
[2025-04-16 14:32:45] 2025-04-16 12:32:25,325 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-04-16 14:32:45] 2025-04-16 12:32:25,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,352 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,352 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,353 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 14:32:45] 2025-04-16 12:32:25,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 14:32:45] 2025-04-16 12:32:25,354 | INFO     | job 6603696514 has completed (purged errors)
[2025-04-16 14:32:45] 2025-04-16 12:32:25,354 | INFO     | overall cleanup function is called
[2025-04-16 14:32:45] 2025-04-16 12:32:26,363 | INFO     | --- collectZombieJob: --- 10, [1355140]
[2025-04-16 14:32:45] 2025-04-16 12:32:26,363 | INFO     | zombie collector waiting for pid 1355140
[2025-04-16 14:32:45] 2025-04-16 12:32:26,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 14:32:45] 2025-04-16 12:32:26,364 | INFO     | collected zombie processes
[2025-04-16 14:32:45] 2025-04-16 12:32:26,364 | INFO     | will attempt to kill all subprocesses of pid=1355140
[2025-04-16 14:32:45] 2025-04-16 12:32:26,708 | INFO     | process IDs to be killed: [1355140] (in reverse order)
[2025-04-16 14:32:45] 2025-04-16 12:32:26,823 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 14:32:45] 2025-04-16 12:32:26,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 14:32:45] 2025-04-16 12:32:26,836 | INFO     | did not find any defunct processes belonging to 1355140
[2025-04-16 14:32:45] 2025-04-16 12:32:26,845 | INFO     | did not find any defunct processes belonging to 1355140
[2025-04-16 14:32:45] 2025-04-16 12:32:26,846 | INFO     | ready for new job
[2025-04-16 14:32:45] 2025-04-16 12:32:26,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 14:32:45] 2025-04-16 12:32:26,848 | INFO     | **************************************
[2025-04-16 14:32:45] 2025-04-16 12:32:26,848 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 14:32:45] 2025-04-16 12:32:26,848 | INFO     | **************************************
[2025-04-16 14:32:45] 2025-04-16 12:32:26,848 | INFO     | 
[2025-04-16 14:32:45] 2025-04-16 12:32:26,854 | INFO     | architecture information:
[2025-04-16 14:32:45] 2025-04-16 12:32:26,854 | INFO     | executing command: cat /etc/os-release
[2025-04-16 14:32:45] 2025-04-16 12:32:26,877 | INFO     | cat /etc/os-release:
[2025-04-16 14:32:45] NAME="CentOS Linux"
[2025-04-16 14:32:45] VERSION="7 (Core)"
[2025-04-16 14:32:45] ID="centos"
[2025-04-16 14:32:45] ID_LIKE="rhel fedora"
[2025-04-16 14:32:45] VERSION_ID="7"
[2025-04-16 14:32:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 14:32:45] ANSI_COLOR="0;31"
[2025-04-16 14:32:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 14:32:45] HOME_URL="https://www.centos.org/"
[2025-04-16 14:32:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 14:32:45] 
[2025-04-16 14:32:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 14:32:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 14:32:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 14:32:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 14:32:45] 
[2025-04-16 14:32:45] 2025-04-16 12:32:26,878 | INFO     | **************************************
[2025-04-16 14:32:45] 2025-04-16 12:32:27,381 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-04-16 14:32:45] 2025-04-16 12:32:27,406 | INFO     | sufficient remaining disk space (1681351770112 B)
[2025-04-16 14:32:45] 2025-04-16 12:32:27,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 14:32:45] 2025-04-16 12:32:27,407 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 14:32:45] 2025-04-16 12:32:27,407 | INFO     | update_server=False
[2025-04-16 14:32:45] 2025-04-16 12:32:27,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 14:32:45] 2025-04-16 12:32:27,408 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 14:32:45] 2025-04-16 12:32:27,408 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 14:32:45] 2025-04-16 12:32:27,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 14:32:45] 2025-04-16 12:32:27,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 14:32:45] 2025-04-16 12:32:27,419 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 14:32:45] 2025-04-16 12:32:27,419 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 14:32:45] 2025-04-16 12:32:27,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 14:32:45] 2025-04-16 12:32:27,420 | INFO     | will abort loop
[2025-04-16 14:32:45] 2025-04-16 12:32:27,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 14:32:45] 2025-04-16 12:32:27,818 | INFO     | all payload control threads have been joined
[2025-04-16 14:32:45] 2025-04-16 12:32:28,309 | INFO     | all data control threads have been joined
[2025-04-16 14:32:45] 2025-04-16 12:32:28,412 | INFO     | [job] retrieve thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:28,425 | INFO     | [job] job monitor thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:28,446 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:28,590 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:28,657 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:28,664 | INFO     | all job control threads have been joined
[2025-04-16 14:32:45] 2025-04-16 12:32:28,819 | INFO     | [payload] control thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:29,061 | INFO     | [payload] failed_post thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:29,315 | INFO     | [data] control thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:29,669 | INFO     | [job] control thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:29,686 | INFO     | [job] validate thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:29,728 | INFO     | [payload] validate_post thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:29,769 | INFO     | [data] copytool_out thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:29,870 | INFO     | [data] copytool_in thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:30,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 14:32:45] 2025-04-16 12:32:30,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 14:32:45] 2025-04-16 12:32:31,339 | INFO     | [job] queue monitor thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:34,155 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:38,276 | INFO     | job.realtimelogging is not enabled
[2025-04-16 14:32:45] 2025-04-16 12:32:39,281 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 14:32:45] 2025-04-16 12:32:40,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056303925056)>', '<ExcThread(monitor, started 140055586793216)>']
[2025-04-16 14:32:45] 2025-04-16 12:32:40,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 14:32:45] 2025-04-16 12:32:40,460 | INFO     | [monitor] control thread has ended
[2025-04-16 14:32:45] 2025-04-16 12:32:45,193 | INFO     | all workflow threads have been joined
[2025-04-16 14:32:45] 2025-04-16 12:32:45,194 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 14:32:45] 2025-04-16 12:32:45,194 | INFO     | traces error code: 0
[2025-04-16 14:32:45] 2025-04-16 12:32:45,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 14:32:45] 2025-04-16 12:32:45,342 [wrapper] ==== pilot stdout END ====
[2025-04-16 14:32:45] 2025-04-16 12:32:45,346 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 14:32:45] 2025-04-16 12:32:45,350 [wrapper] pilotpid: 1346595
[2025-04-16 14:32:45] 2025-04-16 12:32:45,354 [wrapper] Pilot exit status: 0
[2025-04-16 14:32:45] 2025-04-16 12:32:45,369 [wrapper] pandaids: 6603696514
[2025-04-16 14:32:45] 2025-04-16 12:32:45,450 [wrapper] cleanup supervisor_pilot 1517185 1346596
[2025-04-16 14:32:45] 2025-04-16 12:32:45,454 [wrapper] Test setup, not cleaning
[2025-04-16 14:32:45] 2025-04-16 12:32:45,458 [wrapper] apfmon messages muted
[2025-04-16 14:32:45] 2025-04-16 12:32:45,462 [wrapper] ==== wrapper stdout END ====
[2025-04-16 14:32:45] 2025-04-16 12:32:45,465 [wrapper] ==== wrapper stderr END ====
[2025-04-16 14:32:45]  *** Error codes and diagnostics ***
[2025-04-16 14:32:45]     "exeErrorCode": 0,
[2025-04-16 14:32:45]     "exeErrorDiag": "",
[2025-04-16 14:32:45]     "pilotErrorCode": 0,
[2025-04-16 14:32:45]     "pilotErrorDiag": "",
[2025-04-16 14:32:45]  *** Listing of results directory ***
[2025-04-16 14:32:45] total 415976
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc    495897 Apr 16 00:25 pilot3.tar.gz
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc      5111 Apr 16 01:11 queuedata.json
[2025-04-16 14:32:45] -rwx------ 1 boinc boinc     37140 Apr 16 01:12 runpilot2-wrapper.sh
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc       100 Apr 16 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 14:32:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 13:34 run_atlas
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc       105 Apr 16 13:34 job.xml
[2025-04-16 14:32:45] -rw-r--r-- 2 boinc boinc 225763567 Apr 16 13:34 EVNT.44075481._001303.pool.root.1
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc      6654 Apr 16 13:34 init_data.xml
[2025-04-16 14:32:45] -rw-r--r-- 2 boinc boinc     17569 Apr 16 13:34 start_atlas.sh
[2025-04-16 14:32:45] drwxrwx--x 2 boinc boinc      4096 Apr 16 13:34 shared
[2025-04-16 14:32:45] -rw-r--r-- 2 boinc boinc    508895 Apr 16 13:34 input.tar.gz
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc         0 Apr 16 13:34 boinc_lockfile
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc      2575 Apr 16 13:34 pandaJob.out
[2025-04-16 14:32:45] -rw------- 1 boinc boinc       424 Apr 16 13:34 setup.sh.local
[2025-04-16 14:32:45] -rw------- 1 boinc boinc      4725 Apr 16 13:34 agis_schedconf.agis.BOINC_MCORE.json
[2025-04-16 14:32:45] -rw------- 1 boinc boinc   1603529 Apr 16 13:34 agis_ddmendpoints.agis.ALL.json
[2025-04-16 14:32:45] -rw------- 1 boinc boinc    987251 Apr 16 13:35 agis_schedconf.cvmfs.json
[2025-04-16 14:32:45] drwx------ 4 boinc boinc      4096 Apr 16 13:35 pilot3
[2025-04-16 14:32:45] -rw------- 1 boinc boinc        95 Apr 16 14:31 pilot_heartbeat.json
[2025-04-16 14:32:45] -rw------- 1 boinc boinc 194961744 Apr 16 14:31 HITS.44075483._033218.pool.root.1
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc       529 Apr 16 14:31 boinc_task_state.xml
[2025-04-16 14:32:45] -rw------- 1 boinc boinc      1021 Apr 16 14:32 memory_monitor_summary.json
[2025-04-16 14:32:45] -rw------- 1 boinc boinc    334118 Apr 16 14:32 log.44075483._033218.job.log.tgz.1
[2025-04-16 14:32:45] -rw------- 1 boinc boinc      7693 Apr 16 14:32 heartbeat.json
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc      8192 Apr 16 14:32 boinc_mmap_file
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc        27 Apr 16 14:32 wrapper_checkpoint.txt
[2025-04-16 14:32:45] -rw------- 1 boinc boinc      4737 Apr 16 14:32 pilotlog.txt
[2025-04-16 14:32:45] -rw------- 1 boinc boinc    350113 Apr 16 14:32 log.44075483._033218.job.log.1
[2025-04-16 14:32:45] -rw------- 1 boinc boinc       357 Apr 16 14:32 output.list
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc       620 Apr 16 14:32 runtime_log
[2025-04-16 14:32:45] -rw------- 1 boinc boinc    706560 Apr 16 14:32 result.tar.gz
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc     11078 Apr 16 14:32 runtime_log.err
[2025-04-16 14:32:45] -rw------- 1 boinc boinc       662 Apr 16 14:32 ebJLDmLd4O7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmZv1KDm646ODm.diag
[2025-04-16 14:32:45] -rw-r--r-- 1 boinc boinc     21675 Apr 16 14:32 stderr.txt
[2025-04-16 14:32:45] HITS file was successfully produced:
[2025-04-16 14:32:45] -rw------- 1 boinc boinc 194961744 Apr 16 14:31 shared/HITS.pool.root.1
[2025-04-16 14:32:45]  *** Contents of shared directory: ***
[2025-04-16 14:32:45] total 412092
[2025-04-16 14:32:45] -rw-r--r-- 2 boinc boinc 225763567 Apr 16 13:34 ATLAS.root_0
[2025-04-16 14:32:45] -rw-r--r-- 2 boinc boinc     17569 Apr 16 13:34 start_atlas.sh
[2025-04-16 14:32:45] -rw-r--r-- 2 boinc boinc    508895 Apr 16 13:34 input.tar.gz
[2025-04-16 14:32:45] -rw------- 1 boinc boinc 194961744 Apr 16 14:31 HITS.pool.root.1
[2025-04-16 14:32:45] -rw------- 1 boinc boinc    706560 Apr 16 14:32 result.tar.gz
14:32:46 (1342587): run_atlas exited; CPU time 29647.841472
14:32:46 (1342587): called boinc_finish(0)

</stderr_txt>
]]>

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