Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:55:33 (2657): wrapper (7.7.26015): starting
01:55:33 (2657): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 01:55:33] Arguments: --nthreads 12
[2025-04-16 01:55:33] Threads: 12
[2025-04-16 01:55:33] Checking for CVMFS
[2025-04-16 01:55:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 01:55:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 01:55:33] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 01:55:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 01:55:33] 2.11.2.0 22679 366467 172240 144915 2 56 17778067 20275201 1 130560 0 20121911 99.963 6567853 53707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 01:55:33] CVMFS is ok
[2025-04-16 01:55:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 01:55:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 01:55:33] Further information can be found at the LHC@home message board.
[2025-04-16 01:55:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 01:55:33] Checking for apptainer binary...
[2025-04-16 01:55:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 01:55:33] Running /usr/bin/apptainer --version
[2025-04-16 01:55:33] apptainer version 1.3.2-1.el7
[2025-04-16 01:55:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 01:55:35] c-205-11.aglt2.org
[2025-04-16 01:55:35] apptainer works
[2025-04-16 01:55:35] Set ATHENA_PROC_NUMBER=12
[2025-04-16 01:55:35] Set ATHENA_CORE_NUMBER=12
[2025-04-16 01:55:35] Starting ATLAS job with PandaID=6603681459
[2025-04-16 01:55:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 03:19:09]  *** The last 200 lines of the pilot log: ***
[2025-04-16 03:19:09]  lfn=log.44075483._025947.job.log.tgz.1
[2025-04-16 03:19:09]  mtime=0
[2025-04-16 03:19:09]  protocol_id=None
[2025-04-16 03:19:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 03:19:09]  replicas=None
[2025-04-16 03:19:09]  scope=mc23_13p6TeV
[2025-04-16 03:19:09]  status=None
[2025-04-16 03:19:09]  status_code=0
[2025-04-16 03:19:09]  storage_token=
[2025-04-16 03:19:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603681459/log.44075483._025947.job.log.tgz.1
[2025-04-16 03:19:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/6b/log.44075483._025947.job.log.tgz.1
[2025-04-16 03:19:09]  workdir=None
[2025-04-16 03:19:09] ]
[2025-04-16 03:19:09] 2025-04-16 07:18:47,548 | INFO     | transferring file log.44075483._025947.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603681459/log.44075483._025947.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-16 03:19:09] 2025-04-16 07:18:47,549 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603681459/log.44075483._025947.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._025947.job
[2025-04-16 03:19:09] 2025-04-16 07:18:47,574 | INFO     | adding to output.list: log.44075483._025947.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/6b/log.44075483._025947.job.log.tg
[2025-04-16 03:19:09] 2025-04-16 07:18:47,575 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 03:19:09] 2025-04-16 07:18:47,575 | INFO     | summary of transferred files:
[2025-04-16 03:19:09] 2025-04-16 07:18:47,575 | INFO     |  -- lfn=log.44075483._025947.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 03:19:09] 2025-04-16 07:18:47,575 | INFO     | stage-out finished correctly
[2025-04-16 03:19:09] 2025-04-16 07:18:48,444 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 03:19:09] 2025-04-16 07:18:49,821 | WARNING  | process 12790 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 03:19:09] 2025-04-16 07:18:49,822 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603681459/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 03:19:09] 2025-04-16 07:18:49,913 | INFO     | number of running child processes to parent process 12790: 1
[2025-04-16 03:19:09] 2025-04-16 07:18:49,913 | INFO     | maximum number of monitored processes: 6
[2025-04-16 03:19:09] 2025-04-16 07:18:51,332 | INFO     | job 6603681459 has state=finished
[2025-04-16 03:19:09] 2025-04-16 07:18:51,332 | INFO     | preparing for final server update for job 6603681459 in state='finished'
[2025-04-16 03:19:09] 2025-04-16 07:18:51,332 | INFO     | this job has now completed (state=finished)
[2025-04-16 03:19:09] 2025-04-16 07:18:51,333 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 03:19:09] 2025-04-16 07:18:51,333 | INFO     | log transfer has been attempted: DONE
[2025-04-16 03:19:09] 2025-04-16 07:18:51,333 | INFO     | job 6603681459 has finished - writing final server update
[2025-04-16 03:19:09] 2025-04-16 07:18:51,333 | INFO     | total number of processed events: 400 (read)
[2025-04-16 03:19:09] 2025-04-16 07:18:51,335 | INFO     | executing command: lscpu
[2025-04-16 03:19:09] 2025-04-16 07:18:51,361 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 03:19:09] 2025-04-16 07:18:52,417 | INFO     | monitor loop #372: job 0:6603681459 is in state 'finished'
[2025-04-16 03:19:09] 2025-04-16 07:18:52,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 03:19:09] 2025-04-16 07:18:53,510 | INFO     | 4988s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-16 03:19:09] 2025-04-16 07:18:54,920 | INFO     | monitor loop #373: job 0:6603681459 is in state 'finished'
[2025-04-16 03:19:09] 2025-04-16 07:18:54,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 03:19:09] 2025-04-16 07:18:57,247 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-16 03:19:09] 2025-04-16 07:18:57,248 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603681459/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 03:19:09] 2025-04-16 07:18:57,249 | INFO     | extracted standard info from prmon json
[2025-04-16 03:19:09] 2025-04-16 07:18:57,249 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 03:19:09] 2025-04-16 07:18:57,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 03:19:09] 2025-04-16 07:18:57,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 03:19:09] 2025-04-16 07:18:57,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 03:19:09] 2025-04-16 07:18:57,252 | INFO     | fitting pss+swap vs Time
[2025-04-16 03:19:09] 2025-04-16 07:18:57,253 | INFO     | sum of square deviations: 130793150.0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,254 | INFO     | sum of deviations: 18461138820.0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,254 | INFO     | mean x: 1744785539.0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,254 | INFO     | mean y: 2582464.52
[2025-04-16 03:19:09] 2025-04-16 07:18:57,254 | INFO     | -- intersect: -246269703558.16177
[2025-04-16 03:19:09] 2025-04-16 07:18:57,254 | INFO     | intersect: -246269703558.16177
[2025-04-16 03:19:09] 2025-04-16 07:18:57,255 | INFO     | chi2: 2.1690970814805817
[2025-04-16 03:19:09] 2025-04-16 07:18:57,255 | INFO     | -- intersect: -246269703558.16177
[2025-04-16 03:19:09] 2025-04-16 07:18:57,255 | INFO     | current memory leak: 141.15 B/s (using 75 data points, chi2=2.17)
[2025-04-16 03:19:09] 2025-04-16 07:18:57,256 | INFO     | ..............................
[2025-04-16 03:19:09] 2025-04-16 07:18:57,256 | INFO     | . Timing measurements:
[2025-04-16 03:19:09] 2025-04-16 07:18:57,256 | INFO     | . get job = 0 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,256 | INFO     | . initial setup = 2 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,256 | INFO     | . payload setup = 7 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,256 | INFO     | . stage-in = 0 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,257 | INFO     | . payload execution = 4950 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,257 | INFO     | . stage-out = 0 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,257 | INFO     | . log creation = 0 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,257 | INFO     | ..............................
[2025-04-16 03:19:09] 2025-04-16 07:18:57,342 | INFO     | 
[2025-04-16 03:19:09] 2025-04-16 07:18:57,343 | INFO     | job summary report
[2025-04-16 03:19:09] 2025-04-16 07:18:57,343 | INFO     | --------------------------------------------------
[2025-04-16 03:19:09] 2025-04-16 07:18:57,343 | INFO     | PanDA job id: 6603681459
[2025-04-16 03:19:09] 2025-04-16 07:18:57,343 | INFO     | task id: 44075483
[2025-04-16 03:19:09] 2025-04-16 07:18:57,343 | INFO     | errors: (none)
[2025-04-16 03:19:09] 2025-04-16 07:18:57,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 03:19:09] 2025-04-16 07:18:57,344 | INFO     | pilot state: finished 
[2025-04-16 03:19:09] 2025-04-16 07:18:57,344 | INFO     | transexitcode: 0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,344 | INFO     | exeerrorcode: 0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,344 | INFO     | exeerrordiag: 
[2025-04-16 03:19:09] 2025-04-16 07:18:57,344 | INFO     | exitcode: 0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,344 | INFO     | exitmsg: OK
[2025-04-16 03:19:09] 2025-04-16 07:18:57,345 | INFO     | cpuconsumptiontime: 47705 s
[2025-04-16 03:19:09] 2025-04-16 07:18:57,345 | INFO     | nevents: 400
[2025-04-16 03:19:09] 2025-04-16 07:18:57,345 | INFO     | neventsw: 0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,345 | INFO     | pid: 12790
[2025-04-16 03:19:09] 2025-04-16 07:18:57,345 | INFO     | pgrp: 12790
[2025-04-16 03:19:09] 2025-04-16 07:18:57,345 | INFO     | corecount: 12
[2025-04-16 03:19:09] 2025-04-16 07:18:57,346 | INFO     | event service: False
[2025-04-16 03:19:09] 2025-04-16 07:18:57,346 | INFO     | sizes: {0: 2417144, 1: 2417343, 6: 2417549, 12: 2417577, 4962: 2443698, 4964: 2452639, 4965: 2452823, 4973: 2452993}
[2025-04-16 03:19:09] 2025-04-16 07:18:57,346 | INFO     | --------------------------------------------------
[2025-04-16 03:19:09] 2025-04-16 07:18:57,346 | INFO     | 
[2025-04-16 03:19:09] 2025-04-16 07:18:57,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-16 03:19:09] 2025-04-16 07:18:57,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 03:19:09] 2025-04-16 07:18:57,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 03:19:09] 2025-04-16 07:18:57,373 | INFO     | job 6603681459 has completed (purged errors)
[2025-04-16 03:19:09] 2025-04-16 07:18:57,373 | INFO     | overall cleanup function is called
[2025-04-16 03:19:09] 2025-04-16 07:18:58,382 | INFO     | --- collectZombieJob: --- 10, [12790]
[2025-04-16 03:19:09] 2025-04-16 07:18:58,382 | INFO     | zombie collector waiting for pid 12790
[2025-04-16 03:19:09] 2025-04-16 07:18:58,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 03:19:09] 2025-04-16 07:18:58,387 | INFO     | collected zombie processes
[2025-04-16 03:19:09] 2025-04-16 07:18:58,387 | INFO     | will attempt to kill all subprocesses of pid=12790
[2025-04-16 03:19:09] 2025-04-16 07:18:58,481 | INFO     | process IDs to be killed: [12790] (in reverse order)
[2025-04-16 03:19:09] 2025-04-16 07:18:58,539 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 03:19:09] 2025-04-16 07:18:58,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 03:19:09] 2025-04-16 07:18:58,547 | INFO     | did not find any defunct processes belonging to 12790
[2025-04-16 03:19:09] 2025-04-16 07:18:58,555 | INFO     | did not find any defunct processes belonging to 12790
[2025-04-16 03:19:09] 2025-04-16 07:18:58,555 | INFO     | ready for new job
[2025-04-16 03:19:09] 2025-04-16 07:18:58,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 03:19:09] 2025-04-16 07:18:58,556 | INFO     | **************************************
[2025-04-16 03:19:09] 2025-04-16 07:18:58,557 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 03:19:09] 2025-04-16 07:18:58,557 | INFO     | **************************************
[2025-04-16 03:19:09] 2025-04-16 07:18:58,557 | INFO     | 
[2025-04-16 03:19:09] 2025-04-16 07:18:58,558 | INFO     | architecture information:
[2025-04-16 03:19:09] 2025-04-16 07:18:58,558 | INFO     | executing command: cat /etc/os-release
[2025-04-16 03:19:09] 2025-04-16 07:18:58,573 | INFO     | cat /etc/os-release:
[2025-04-16 03:19:09] NAME="CentOS Linux"
[2025-04-16 03:19:09] VERSION="7 (Core)"
[2025-04-16 03:19:09] ID="centos"
[2025-04-16 03:19:09] ID_LIKE="rhel fedora"
[2025-04-16 03:19:09] VERSION_ID="7"
[2025-04-16 03:19:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 03:19:09] ANSI_COLOR="0;31"
[2025-04-16 03:19:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 03:19:09] HOME_URL="https://www.centos.org/"
[2025-04-16 03:19:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 03:19:09] 
[2025-04-16 03:19:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 03:19:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 03:19:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 03:19:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 03:19:09] 
[2025-04-16 03:19:09] 2025-04-16 07:18:58,573 | INFO     | **************************************
[2025-04-16 03:19:09] 2025-04-16 07:18:58,656 | INFO     | PID=6291 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-16 03:19:09] 2025-04-16 07:18:59,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-16 03:19:09] 2025-04-16 07:18:59,092 | INFO     | sufficient remaining disk space (29394731008 B)
[2025-04-16 03:19:09] 2025-04-16 07:18:59,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 03:19:09] 2025-04-16 07:18:59,093 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 03:19:09] 2025-04-16 07:18:59,093 | INFO     | update_server=False
[2025-04-16 03:19:09] 2025-04-16 07:18:59,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 03:19:09] 2025-04-16 07:18:59,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 03:19:09] 2025-04-16 07:18:59,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 03:19:09] 2025-04-16 07:18:59,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 03:19:09] 2025-04-16 07:18:59,094 | INFO     | aborting loop
[2025-04-16 03:19:09] 2025-04-16 07:18:59,095 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 03:19:09] 2025-04-16 07:18:59,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 03:19:09] 2025-04-16 07:18:59,095 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 03:19:09] 2025-04-16 07:18:59,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 03:19:09] 2025-04-16 07:18:59,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 03:19:09] 2025-04-16 07:18:59,335 | INFO     | all job control threads have been joined
[2025-04-16 03:19:09] 2025-04-16 07:18:59,450 | INFO     | all data control threads have been joined
[2025-04-16 03:19:09] 2025-04-16 07:19:00,098 | INFO     | [job] queue monitor thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:00,099 | INFO     | [job] retrieve thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:00,100 | INFO     | [job] job monitor thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:00,241 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:00,264 | INFO     | all payload control threads have been joined
[2025-04-16 03:19:09] 2025-04-16 07:19:00,340 | INFO     | [job] control thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:00,455 | INFO     | [data] control thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:00,473 | INFO     | [data] copytool_in thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:00,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:01,049 | INFO     | [job] validate thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:01,101 | INFO     | [data] copytool_out thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:01,222 | INFO     | [payload] validate_post thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:01,269 | INFO     | [payload] control thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:01,482 | INFO     | [payload] failed_post thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:01,561 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:01,573 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:03,099 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 03:19:09] 2025-04-16 07:19:04,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465213478720)>', '<ExcThread(monitor, started 140464917292800)>']
[2025-04-16 03:19:09] 2025-04-16 07:19:05,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 03:19:09] 2025-04-16 07:19:05,124 | INFO     | [monitor] control thread has ended
[2025-04-16 03:19:09] 2025-04-16 07:19:09,614 | INFO     | all workflow threads have been joined
[2025-04-16 03:19:09] 2025-04-16 07:19:09,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 03:19:09] 2025-04-16 07:19:09,623 | INFO     | traces error code: 0
[2025-04-16 03:19:09] 2025-04-16 07:19:09,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 03:19:09] 2025-04-16 07:19:09,719 [wrapper] ==== pilot stdout END ====
[2025-04-16 03:19:09] 2025-04-16 07:19:09,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 03:19:09] 2025-04-16 07:19:09,726 [wrapper] pilotpid: 6291
[2025-04-16 03:19:09] 2025-04-16 07:19:09,730 [wrapper] Pilot exit status: 0
[2025-04-16 03:19:09] 2025-04-16 07:19:09,746 [wrapper] pandaids: 6603681459
[2025-04-16 03:19:09] 2025-04-16 07:19:09,785 [wrapper] cleanup supervisor_pilot 28115 6292
[2025-04-16 03:19:09] 2025-04-16 07:19:09,789 [wrapper] Test setup, not cleaning
[2025-04-16 03:19:09] 2025-04-16 07:19:09,793 [wrapper] apfmon messages muted
[2025-04-16 03:19:09] 2025-04-16 07:19:09,797 [wrapper] ==== wrapper stdout END ====
[2025-04-16 03:19:09] 2025-04-16 07:19:09,801 [wrapper] ==== wrapper stderr END ====
[2025-04-16 03:19:09]  *** Error codes and diagnostics ***
[2025-04-16 03:19:09]     "exeErrorCode": 0,
[2025-04-16 03:19:09]     "exeErrorDiag": "",
[2025-04-16 03:19:09]     "pilotErrorCode": 0,
[2025-04-16 03:19:09]     "pilotErrorDiag": "",
[2025-04-16 03:19:09]  *** Listing of results directory ***
[2025-04-16 03:19:09] total 417376
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 03:47 pilot3.tar.gz
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 04:10 queuedata.json
[2025-04-16 03:19:09] -rwx------ 1 boincer umatlas     37140 Apr 15 04:11 runpilot2-wrapper.sh
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas       100 Apr 16 01:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 03:19:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 01:55 run_atlas
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas       105 Apr 16 01:55 job.xml
[2025-04-16 03:19:09] -rw-r--r-- 2 boincer umatlas 224668699 Apr 16 01:55 EVNT.44075481._001012.pool.root.1
[2025-04-16 03:19:09] -rw-r--r-- 2 boincer umatlas    508892 Apr 16 01:55 input.tar.gz
[2025-04-16 03:19:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 01:55 start_atlas.sh
[2025-04-16 03:19:09] drwxrwx--x 2 boincer umatlas      4096 Apr 16 01:55 shared
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas         0 Apr 16 01:55 boinc_lockfile
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas      2578 Apr 16 01:55 pandaJob.out
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas       424 Apr 16 01:55 setup.sh.local
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas    986044 Apr 16 01:55 agis_schedconf.cvmfs.json
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas   1603529 Apr 16 01:55 agis_ddmendpoints.agis.ALL.json
[2025-04-16 03:19:09] drwx------ 4 boincer umatlas      4096 Apr 16 01:55 pilot3
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas      5868 Apr 16 03:13 init_data.xml
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas 197202896 Apr 16 03:18 HITS.44075483._025947.pool.root.1
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas       529 Apr 16 03:18 boinc_task_state.xml
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas      1063 Apr 16 03:18 memory_monitor_summary.json
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas    370715 Apr 16 03:18 log.44075483._025947.job.log.tgz.1
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas        95 Apr 16 03:18 pilot_heartbeat.json
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas      7757 Apr 16 03:18 heartbeat.json
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 03:19 boinc_mmap_file
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas        27 Apr 16 03:19 wrapper_checkpoint.txt
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas      4792 Apr 16 03:19 pilotlog.txt
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas    472914 Apr 16 03:19 log.44075483._025947.job.log.1
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas       357 Apr 16 03:19 output.list
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas       620 Apr 16 03:19 runtime_log
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas    860160 Apr 16 03:19 result.tar.gz
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas       658 Apr 16 03:19 zw9LDm9YqO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGpXLDmTHrrtn.diag
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas     11015 Apr 16 03:19 runtime_log.err
[2025-04-16 03:19:09] -rw-r--r-- 1 boincer umatlas     21709 Apr 16 03:19 stderr.txt
[2025-04-16 03:19:09] HITS file was successfully produced:
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas 197202896 Apr 16 03:18 shared/HITS.pool.root.1
[2025-04-16 03:19:09]  *** Contents of shared directory: ***
[2025-04-16 03:19:09] total 413348
[2025-04-16 03:19:09] -rw-r--r-- 2 boincer umatlas 224668699 Apr 16 01:55 ATLAS.root_0
[2025-04-16 03:19:09] -rw-r--r-- 2 boincer umatlas    508892 Apr 16 01:55 input.tar.gz
[2025-04-16 03:19:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 01:55 start_atlas.sh
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas 197202896 Apr 16 03:18 HITS.pool.root.1
[2025-04-16 03:19:09] -rw------- 1 boincer umatlas    860160 Apr 16 03:19 result.tar.gz
03:19:11 (2657): run_atlas exited; CPU time 47694.772267
03:19:11 (2657): called boinc_finish(0)

</stderr_txt>
]]>

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