Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:16:05 (9752): wrapper (7.7.26015): starting
01:16:05 (9752): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 01:16:05] Arguments: --nthreads 12
[2025-04-16 01:16:05] Threads: 12
[2025-04-16 01:16:05] Checking for CVMFS
[2025-04-16 01:16:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 01:16:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 01:16:05] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 01:16:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 01:16:05] 2.11.2.0 30117 39370 140780 144915 3 52 10222225 18432000 4409 130560 0 54086074 98.420 190268269 31923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 01:16:05] CVMFS is ok
[2025-04-16 01:16:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 01:16:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 01:16:05] Further information can be found at the LHC@home message board.
[2025-04-16 01:16:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 01:16:05] Checking for apptainer binary...
[2025-04-16 01:16:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 01:16:05] Running /usr/bin/apptainer --version
[2025-04-16 01:16:06] apptainer version 1.3.2-1.el7
[2025-04-16 01:16:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 01:16:07] c-206-6.aglt2.org
[2025-04-16 01:16:07] apptainer works
[2025-04-16 01:16:08] Set ATHENA_PROC_NUMBER=12
[2025-04-16 01:16:08] Set ATHENA_CORE_NUMBER=12
[2025-04-16 01:16:08] Starting ATLAS job with PandaID=6603698707
[2025-04-16 01:16:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 05:26:25]  *** The last 200 lines of the pilot log: ***
[2025-04-16 05:26:25] 2025-04-16 09:26:10,425 | INFO     | sum of deviations: 91597671722.82927
[2025-04-16 05:26:25] 2025-04-16 09:26:10,425 | INFO     | mean x: 1744788084.5528455
[2025-04-16 05:26:25] 2025-04-16 09:26:10,426 | INFO     | mean y: 2614771.7439024393
[2025-04-16 05:26:25] 2025-04-16 09:26:10,426 | INFO     | -- intersect: -34619291949.835266
[2025-04-16 05:26:25] 2025-04-16 09:26:10,426 | INFO     | intersect: -34619291949.835266
[2025-04-16 05:26:25] 2025-04-16 09:26:10,426 | INFO     | chi2: 6.779520686806432
[2025-04-16 05:26:25] 2025-04-16 09:26:10,427 | INFO     | sum of square deviations: 4340322642.298739
[2025-04-16 05:26:25] 2025-04-16 09:26:10,429 | INFO     | sum of deviations: 107803797411.33191
[2025-04-16 05:26:25] 2025-04-16 09:26:10,429 | INFO     | mean x: 1744787932.053942
[2025-04-16 05:26:25] 2025-04-16 09:26:10,430 | INFO     | mean y: 2623569.2821576763
[2025-04-16 05:26:25] 2025-04-16 09:26:10,430 | INFO     | -- intersect: -43333962268.783646
[2025-04-16 05:26:25] 2025-04-16 09:26:10,430 | INFO     | intersect: -43333962268.783646
[2025-04-16 05:26:25] 2025-04-16 09:26:10,430 | INFO     | chi2: 6.001455963567609
[2025-04-16 05:26:25] 2025-04-16 09:26:10,431 | INFO     | current chi2=6.001455963567609 (change=11.476692220336584 %)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,431 | INFO     | right removable region: 240
[2025-04-16 05:26:25] 2025-04-16 09:26:10,431 | INFO     | sum of square deviations: 4340314712.298739
[2025-04-16 05:26:25] 2025-04-16 09:26:10,433 | INFO     | sum of deviations: 21626952327.170135
[2025-04-16 05:26:25] 2025-04-16 09:26:10,434 | INFO     | mean x: 1744788237.053942
[2025-04-16 05:26:25] 2025-04-16 09:26:10,434 | INFO     | mean y: 2653376.2946058093
[2025-04-16 05:26:25] 2025-04-16 09:26:10,434 | INFO     | -- intersect: -8691290387.010916
[2025-04-16 05:26:25] 2025-04-16 09:26:10,434 | INFO     | intersect: -8691290387.010916
[2025-04-16 05:26:25] 2025-04-16 09:26:10,435 | INFO     | chi2: 3.76836882543177
[2025-04-16 05:26:25] 2025-04-16 09:26:10,435 | INFO     | current chi2=3.76836882543177 (change=44.41540929633328 %)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,435 | INFO     | sum of square deviations: 4075729042.2838874
[2025-04-16 05:26:25] 2025-04-16 09:26:10,437 | INFO     | sum of deviations: -29678168311.51696
[2025-04-16 05:26:25] 2025-04-16 09:26:10,438 | INFO     | mean x: 1744788389.5550847
[2025-04-16 05:26:25] 2025-04-16 09:26:10,438 | INFO     | mean y: 2682949.3474576273
[2025-04-16 05:26:25] 2025-04-16 09:26:10,438 | INFO     | -- intersect: 12707679517.07308
[2025-04-16 05:26:25] 2025-04-16 09:26:10,438 | INFO     | intersect: 12707679517.07308
[2025-04-16 05:26:25] 2025-04-16 09:26:10,439 | INFO     | chi2: 2.2221655427342757
[2025-04-16 05:26:25] 2025-04-16 09:26:10,439 | INFO     | current chi2=2.2221655427342757 (change=41.03110269521812 %)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,439 | INFO     | sum of square deviations: 3822120322.2684083
[2025-04-16 05:26:25] 2025-04-16 09:26:10,442 | INFO     | sum of deviations: -71507665281.30739
[2025-04-16 05:26:25] 2025-04-16 09:26:10,442 | INFO     | mean x: 1744788542.056277
[2025-04-16 05:26:25] 2025-04-16 09:26:10,442 | INFO     | mean y: 2708032.1774891773
[2025-04-16 05:26:25] 2025-04-16 09:26:10,442 | INFO     | -- intersect: 32645781648.963253
[2025-04-16 05:26:25] 2025-04-16 09:26:10,442 | INFO     | intersect: 32645781648.963253
[2025-04-16 05:26:25] 2025-04-16 09:26:10,443 | INFO     | chi2: 1.1076173313471838
[2025-04-16 05:26:25] 2025-04-16 09:26:10,443 | INFO     | current chi2=1.1076173313471838 (change=50.15594877849154 %)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,444 | INFO     | sum of square deviations: 3579255989.7522206
[2025-04-16 05:26:25] 2025-04-16 09:26:10,446 | INFO     | sum of deviations: -74847637938.21239
[2025-04-16 05:26:25] 2025-04-16 09:26:10,446 | INFO     | mean x: 1744788694.557522
[2025-04-16 05:26:25] 2025-04-16 09:26:10,446 | INFO     | mean y: 2710064.4778761063
[2025-04-16 05:26:25] 2025-04-16 09:26:10,446 | INFO     | -- intersect: 36488871675.39081
[2025-04-16 05:26:25] 2025-04-16 09:26:10,446 | INFO     | intersect: 36488871675.39081
[2025-04-16 05:26:25] 2025-04-16 09:26:10,447 | INFO     | chi2: 1.039611552289594
[2025-04-16 05:26:25] 2025-04-16 09:26:10,447 | INFO     | current chi2=1.039611552289594 (change=6.139826195647835 %)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,447 | INFO     | left removable region: 40
[2025-04-16 05:26:25] 2025-04-16 09:26:10,448 | INFO     | sum of square deviations: 2480587459.279986
[2025-04-16 05:26:25] 2025-04-16 09:26:10,450 | INFO     | sum of deviations: -31101884823.080017
[2025-04-16 05:26:25] 2025-04-16 09:26:10,450 | INFO     | mean x: 1744789121.56
[2025-04-16 05:26:25] 2025-04-16 09:26:10,450 | INFO     | mean y: 2703106.34
[2025-04-16 05:26:25] 2025-04-16 09:26:10,450 | INFO     | -- intersect: 21879065536.6626
[2025-04-16 05:26:25] 2025-04-16 09:26:10,450 | INFO     | intersect: 21879065536.6626
[2025-04-16 05:26:25] 2025-04-16 09:26:10,451 | INFO     | chi2: 0.16674281360636328
[2025-04-16 05:26:25] 2025-04-16 09:26:10,451 | INFO     | -- intersect: 21879065536.6626
[2025-04-16 05:26:25] 2025-04-16 09:26:10,451 | INFO     | current memory leak: -12.54 B/s (using 200 data points, chi2=0.17)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,452 | INFO     | ..............................
[2025-04-16 05:26:25] 2025-04-16 09:26:10,452 | INFO     | . Timing measurements:
[2025-04-16 05:26:25] 2025-04-16 09:26:10,452 | INFO     | . get job = 0 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,452 | INFO     | . initial setup = 3 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,453 | INFO     | . payload setup = 7 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,453 | INFO     | . stage-in = 0 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,453 | INFO     | . payload execution = 14954 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,453 | INFO     | . stage-out = 2 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,453 | INFO     | . log creation = 0 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,453 | INFO     | ..............................
[2025-04-16 05:26:25] 2025-04-16 09:26:10,606 | INFO     | 
[2025-04-16 05:26:25] 2025-04-16 09:26:10,606 | INFO     | job summary report
[2025-04-16 05:26:25] 2025-04-16 09:26:10,606 | INFO     | --------------------------------------------------
[2025-04-16 05:26:25] 2025-04-16 09:26:10,606 | INFO     | PanDA job id: 6603698707
[2025-04-16 05:26:25] 2025-04-16 09:26:10,606 | INFO     | task id: 44075483
[2025-04-16 05:26:25] 2025-04-16 09:26:10,606 | INFO     | errors: (none)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | pilot state: finished 
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | transexitcode: 0
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | exeerrorcode: 0
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | exeerrordiag: 
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | exitcode: 0
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | exitmsg: OK
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | cpuconsumptiontime: 93883 s
[2025-04-16 05:26:25] 2025-04-16 09:26:10,607 | INFO     | nevents: 400
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | neventsw: 0
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | pid: 21278
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | pgrp: 21278
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | corecount: 12
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | event service: False
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | sizes: {0: 2416487, 1: 2417343, 6: 2417549, 12: 2417577, 14963: 2448438, 14964: 2448437, 14966: 2457562, 14968: 2457618, 14973: 2457788}
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | --------------------------------------------------
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | 
[2025-04-16 05:26:25] 2025-04-16 09:26:10,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-16 05:26:25] 2025-04-16 09:26:10,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,734 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,734 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 05:26:25] 2025-04-16 09:26:10,734 | INFO     | job 6603698707 has completed (purged errors)
[2025-04-16 05:26:25] 2025-04-16 09:26:10,734 | INFO     | overall cleanup function is called
[2025-04-16 05:26:25] 2025-04-16 09:26:11,742 | INFO     | --- collectZombieJob: --- 10, [21278]
[2025-04-16 05:26:25] 2025-04-16 09:26:11,744 | INFO     | zombie collector waiting for pid 21278
[2025-04-16 05:26:25] 2025-04-16 09:26:11,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 05:26:25] 2025-04-16 09:26:11,744 | INFO     | collected zombie processes
[2025-04-16 05:26:25] 2025-04-16 09:26:11,744 | INFO     | will attempt to kill all subprocesses of pid=21278
[2025-04-16 05:26:25] 2025-04-16 09:26:11,950 | INFO     | process IDs to be killed: [21278] (in reverse order)
[2025-04-16 05:26:25] 2025-04-16 09:26:12,005 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 05:26:25] 2025-04-16 09:26:12,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 05:26:25] 2025-04-16 09:26:12,013 | INFO     | did not find any defunct processes belonging to 21278
[2025-04-16 05:26:25] 2025-04-16 09:26:12,019 | INFO     | did not find any defunct processes belonging to 21278
[2025-04-16 05:26:25] 2025-04-16 09:26:12,019 | INFO     | ready for new job
[2025-04-16 05:26:25] 2025-04-16 09:26:12,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 05:26:25] 2025-04-16 09:26:12,021 | INFO     | **************************************
[2025-04-16 05:26:25] 2025-04-16 09:26:12,022 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 05:26:25] 2025-04-16 09:26:12,022 | INFO     | **************************************
[2025-04-16 05:26:25] 2025-04-16 09:26:12,022 | INFO     | 
[2025-04-16 05:26:25] 2025-04-16 09:26:12,023 | INFO     | architecture information:
[2025-04-16 05:26:25] 2025-04-16 09:26:12,024 | INFO     | executing command: cat /etc/os-release
[2025-04-16 05:26:25] 2025-04-16 09:26:12,038 | INFO     | cat /etc/os-release:
[2025-04-16 05:26:25] NAME="CentOS Linux"
[2025-04-16 05:26:25] VERSION="7 (Core)"
[2025-04-16 05:26:25] ID="centos"
[2025-04-16 05:26:25] ID_LIKE="rhel fedora"
[2025-04-16 05:26:25] VERSION_ID="7"
[2025-04-16 05:26:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 05:26:25] ANSI_COLOR="0;31"
[2025-04-16 05:26:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 05:26:25] HOME_URL="https://www.centos.org/"
[2025-04-16 05:26:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 05:26:25] 
[2025-04-16 05:26:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 05:26:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 05:26:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 05:26:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 05:26:25] 
[2025-04-16 05:26:25] 2025-04-16 09:26:12,038 | INFO     | **************************************
[2025-04-16 05:26:25] 2025-04-16 09:26:12,541 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-16 05:26:25] 2025-04-16 09:26:12,553 | INFO     | sufficient remaining disk space (29205987328 B)
[2025-04-16 05:26:25] 2025-04-16 09:26:12,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 05:26:25] 2025-04-16 09:26:12,554 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 05:26:25] 2025-04-16 09:26:12,554 | INFO     | update_server=False
[2025-04-16 05:26:25] 2025-04-16 09:26:12,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 05:26:25] 2025-04-16 09:26:12,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 05:26:25] 2025-04-16 09:26:12,554 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 05:26:25] 2025-04-16 09:26:12,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 05:26:25] 2025-04-16 09:26:12,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 05:26:25] 2025-04-16 09:26:12,555 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 05:26:25] 2025-04-16 09:26:12,555 | INFO     | aborting loop
[2025-04-16 05:26:25] 2025-04-16 09:26:12,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 05:26:25] 2025-04-16 09:26:12,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 05:26:25] 2025-04-16 09:26:13,495 | INFO     | all data control threads have been joined
[2025-04-16 05:26:25] 2025-04-16 09:26:13,555 | INFO     | [job] queue monitor thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:13,556 | INFO     | [job] retrieve thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:13,559 | INFO     | [job] job monitor thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:13,564 | INFO     | [payload] validate_post thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:13,686 | INFO     | all payload control threads have been joined
[2025-04-16 05:26:25] 2025-04-16 09:26:13,706 | INFO     | all job control threads have been joined
[2025-04-16 05:26:25] 2025-04-16 09:26:13,811 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:13,897 | INFO     | [payload] failed_post thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,065 | INFO     | [job] validate thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,252 | INFO     | [data] copytool_in thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,499 | INFO     | [data] control thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,535 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,557 | INFO     | [data] copytool_out thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,689 | INFO     | [payload] control thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,708 | INFO     | [job] control thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:14,710 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:15,028 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:15,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 05:26:25] 2025-04-16 09:26:19,939 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 05:26:25] 2025-04-16 09:26:20,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212857784128)>', '<ExcThread(monitor, started 140212294383360)>']
[2025-04-16 05:26:25] 2025-04-16 09:26:20,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 05:26:25] 2025-04-16 09:26:20,590 | INFO     | [monitor] control thread has ended
[2025-04-16 05:26:25] 2025-04-16 09:26:25,280 | INFO     | all workflow threads have been joined
[2025-04-16 05:26:25] 2025-04-16 09:26:25,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 05:26:25] 2025-04-16 09:26:25,281 | INFO     | traces error code: 0
[2025-04-16 05:26:25] 2025-04-16 09:26:25,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 05:26:25] 2025-04-16 09:26:25,379 [wrapper] ==== pilot stdout END ====
[2025-04-16 05:26:25] 2025-04-16 09:26:25,381 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 05:26:25] 2025-04-16 09:26:25,383 [wrapper] pilotpid: 14174
[2025-04-16 05:26:25] 2025-04-16 09:26:25,461 [wrapper] Pilot exit status: 0
[2025-04-16 05:26:25] 2025-04-16 09:26:25,517 [wrapper] pandaids: 6603698707
[2025-04-16 05:26:25] 2025-04-16 09:26:25,558 [wrapper] cleanup supervisor_pilot 23502 14175
[2025-04-16 05:26:25] 2025-04-16 09:26:25,561 [wrapper] Test setup, not cleaning
[2025-04-16 05:26:25] 2025-04-16 09:26:25,563 [wrapper] apfmon messages muted
[2025-04-16 05:26:25] 2025-04-16 09:26:25,565 [wrapper] ==== wrapper stdout END ====
[2025-04-16 05:26:25] 2025-04-16 09:26:25,568 [wrapper] ==== wrapper stderr END ====
[2025-04-16 05:26:25]  *** Error codes and diagnostics ***
[2025-04-16 05:26:25]     "exeErrorCode": 0,
[2025-04-16 05:26:25]     "exeErrorDiag": "",
[2025-04-16 05:26:25]     "pilotErrorCode": 0,
[2025-04-16 05:26:25]     "pilotErrorDiag": "",
[2025-04-16 05:26:25]  *** Listing of results directory ***
[2025-04-16 05:26:25] total 421252
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 21:29 pilot3.tar.gz
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 21:31 queuedata.json
[2025-04-16 05:26:25] -rwx------ 1 boincer umatlas     37140 Apr 15 21:32 runpilot2-wrapper.sh
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas       100 Apr 16 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 05:26:25] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 01:16 run_atlas
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas       105 Apr 16 01:16 job.xml
[2025-04-16 05:26:25] -rw-r--r-- 2 boincer umatlas 225998459 Apr 16 01:16 EVNT.44075481._001352.pool.root.1
[2025-04-16 05:26:25] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 01:16 start_atlas.sh
[2025-04-16 05:26:25] drwxrwx--x 2 boincer umatlas      4096 Apr 16 01:16 shared
[2025-04-16 05:26:25] -rw-r--r-- 2 boincer umatlas    508898 Apr 16 01:16 input.tar.gz
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas         0 Apr 16 01:16 boinc_lockfile
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas      2578 Apr 16 01:16 pandaJob.out
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas       467 Apr 16 01:16 setup.sh.local
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas    986044 Apr 16 01:16 agis_schedconf.cvmfs.json
[2025-04-16 05:26:25] drwx------ 4 boincer umatlas      4096 Apr 16 01:16 pilot3
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas      5950 Apr 16 05:18 init_data.xml
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas 197893297 Apr 16 05:25 HITS.44075483._034465.pool.root.1
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas        95 Apr 16 05:25 pilot_heartbeat.json
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas       531 Apr 16 05:25 boinc_task_state.xml
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas      1057 Apr 16 05:26 memory_monitor_summary.json
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas   1603529 Apr 16 05:26 agis_ddmendpoints.agis.ALL.json
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas    476729 Apr 16 05:26 log.44075483._034465.job.log.tgz.1
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 05:26 boinc_mmap_file
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas        28 Apr 16 05:26 wrapper_checkpoint.txt
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas      7759 Apr 16 05:26 heartbeat.json
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas      4476 Apr 16 05:26 pilotlog.txt
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas   1338108 Apr 16 05:26 log.44075483._034465.job.log.1
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas       357 Apr 16 05:26 output.list
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas       620 Apr 16 05:26 runtime_log
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas   1832960 Apr 16 05:26 result.tar.gz
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas     11416 Apr 16 05:26 runtime_log.err
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas       661 Apr 16 05:26 9JGKDmYo6O7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmV21KDmCiuu3m.diag
[2025-04-16 05:26:25] -rw-r--r-- 1 boincer umatlas     20817 Apr 16 05:26 stderr.txt
[2025-04-16 05:26:25] HITS file was successfully produced:
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas 197893297 Apr 16 05:25 shared/HITS.pool.root.1
[2025-04-16 05:26:25]  *** Contents of shared directory: ***
[2025-04-16 05:26:25] total 416276
[2025-04-16 05:26:25] -rw-r--r-- 2 boincer umatlas 225998459 Apr 16 01:16 ATLAS.root_0
[2025-04-16 05:26:25] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 01:16 start_atlas.sh
[2025-04-16 05:26:25] -rw-r--r-- 2 boincer umatlas    508898 Apr 16 01:16 input.tar.gz
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas 197893297 Apr 16 05:25 HITS.pool.root.1
[2025-04-16 05:26:25] -rw------- 1 boincer umatlas   1832960 Apr 16 05:26 result.tar.gz
05:26:27 (9752): run_atlas exited; CPU time 94152.269088
05:26:27 (9752): called boinc_finish(0)

</stderr_txt>
]]>

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