Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:43:53 (7439): wrapper (7.7.26015): starting
00:43:53 (7439): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 00:43:53] Arguments: --nthreads 12
[2025-04-16 00:43:53] Threads: 12
[2025-04-16 00:43:53] Checking for CVMFS
[2025-04-16 00:43:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 00:43:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 00:43:54] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 00:43:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 00:43:54] 2.11.2.0 2994 213907 165716 144914 1 58 18384787 20275200 1 130560 0 20195727 99.943 7232875 48506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 00:43:54] CVMFS is ok
[2025-04-16 00:43:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 00:43:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 00:43:54] Further information can be found at the LHC@home message board.
[2025-04-16 00:43:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 00:43:54] Checking for apptainer binary...
[2025-04-16 00:43:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 00:43:54] Running /usr/bin/apptainer --version
[2025-04-16 00:43:54] apptainer version 1.3.2-1.el7
[2025-04-16 00:43:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 00:43:55] c-205-21.aglt2.org
[2025-04-16 00:43:55] apptainer works
[2025-04-16 00:43:55] Set ATHENA_PROC_NUMBER=12
[2025-04-16 00:43:55] Set ATHENA_CORE_NUMBER=12
[2025-04-16 00:43:55] Starting ATLAS job with PandaID=6603692509
[2025-04-16 00:43:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 02:08:51]  *** The last 200 lines of the pilot log: ***
[2025-04-16 02:08:51]  is_tar=False
[2025-04-16 02:08:51]  lfn=log.44075483._031166.job.log.tgz.1
[2025-04-16 02:08:51]  mtime=0
[2025-04-16 02:08:51]  protocol_id=None
[2025-04-16 02:08:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 02:08:51]  replicas=None
[2025-04-16 02:08:51]  scope=mc23_13p6TeV
[2025-04-16 02:08:51]  status=None
[2025-04-16 02:08:51]  status_code=0
[2025-04-16 02:08:51]  storage_token=
[2025-04-16 02:08:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603692509/log.44075483._031166.job.log.tgz.1
[2025-04-16 02:08:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/80/log.44075483._031166.job.log.tgz.1
[2025-04-16 02:08:51]  workdir=None
[2025-04-16 02:08:51] ]
[2025-04-16 02:08:51] 2025-04-16 06:08:23,500 | INFO     | transferring file log.44075483._031166.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603692509/log.44075483._031166.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-16 02:08:51] 2025-04-16 06:08:23,500 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603692509/log.44075483._031166.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._031166.job
[2025-04-16 02:08:51] 2025-04-16 06:08:23,523 | INFO     | adding to output.list: log.44075483._031166.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/80/log.44075483._031166.job.log.tg
[2025-04-16 02:08:51] 2025-04-16 06:08:23,523 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 02:08:51] 2025-04-16 06:08:23,524 | INFO     | summary of transferred files:
[2025-04-16 02:08:51] 2025-04-16 06:08:23,524 | INFO     |  -- lfn=log.44075483._031166.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 02:08:51] 2025-04-16 06:08:23,524 | INFO     | stage-out finished correctly
[2025-04-16 02:08:51] 2025-04-16 06:08:25,385 | INFO     | PID=11099 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-16 02:08:51] 2025-04-16 06:08:25,691 | WARNING  | process 17443 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 02:08:51] 2025-04-16 06:08:25,691 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603692509/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 02:08:51] 2025-04-16 06:08:25,778 | INFO     | number of running child processes to parent process 17443: 1
[2025-04-16 02:08:51] 2025-04-16 06:08:25,779 | INFO     | maximum number of monitored processes: 6
[2025-04-16 02:08:51] 2025-04-16 06:08:25,886 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 02:08:51] 2025-04-16 06:08:28,279 | INFO     | monitor loop #378: job 0:6603692509 is in state 'finished'
[2025-04-16 02:08:51] 2025-04-16 06:08:28,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 02:08:51] 2025-04-16 06:08:28,389 | INFO     | job 6603692509 has state=finished
[2025-04-16 02:08:51] 2025-04-16 06:08:28,389 | INFO     | preparing for final server update for job 6603692509 in state='finished'
[2025-04-16 02:08:51] 2025-04-16 06:08:28,390 | INFO     | this job has now completed (state=finished)
[2025-04-16 02:08:51] 2025-04-16 06:08:28,390 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 02:08:51] 2025-04-16 06:08:28,390 | INFO     | log transfer has been attempted: DONE
[2025-04-16 02:08:51] 2025-04-16 06:08:28,390 | INFO     | job 6603692509 has finished - writing final server update
[2025-04-16 02:08:51] 2025-04-16 06:08:28,391 | INFO     | total number of processed events: 400 (read)
[2025-04-16 02:08:51] 2025-04-16 06:08:28,392 | INFO     | executing command: lscpu
[2025-04-16 02:08:51] 2025-04-16 06:08:28,418 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 02:08:51] 2025-04-16 06:08:30,783 | INFO     | monitor loop #379: job 0:6603692509 is in state 'finished'
[2025-04-16 02:08:51] 2025-04-16 06:08:30,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 02:08:51] 2025-04-16 06:08:33,133 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-16 02:08:51] 2025-04-16 06:08:33,133 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603692509/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 02:08:51] 2025-04-16 06:08:33,134 | INFO     | extracted standard info from prmon json
[2025-04-16 02:08:51] 2025-04-16 06:08:33,134 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 02:08:51] 2025-04-16 06:08:33,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 02:08:51] 2025-04-16 06:08:33,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 02:08:51] 2025-04-16 06:08:33,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 02:08:51] 2025-04-16 06:08:33,137 | INFO     | fitting pss+swap vs Time
[2025-04-16 02:08:51] 2025-04-16 06:08:33,138 | INFO     | sum of square deviations: 136095575.0
[2025-04-16 02:08:51] 2025-04-16 06:08:33,138 | INFO     | sum of deviations: 19142871587.0
[2025-04-16 02:08:51] 2025-04-16 06:08:33,139 | INFO     | mean x: 1744781270.5
[2025-04-16 02:08:51] 2025-04-16 06:08:33,139 | INFO     | mean y: 2567678.710526316
[2025-04-16 02:08:51] 2025-04-16 06:08:33,139 | INFO     | -- intersect: -245414109598.15326
[2025-04-16 02:08:51] 2025-04-16 06:08:33,139 | INFO     | intersect: -245414109598.15326
[2025-04-16 02:08:51] 2025-04-16 06:08:33,140 | INFO     | chi2: 2.1402496565973657
[2025-04-16 02:08:51] 2025-04-16 06:08:33,140 | INFO     | -- intersect: -245414109598.15326
[2025-04-16 02:08:51] 2025-04-16 06:08:33,140 | INFO     | current memory leak: 140.66 B/s (using 76 data points, chi2=2.14)
[2025-04-16 02:08:51] 2025-04-16 06:08:33,140 | INFO     | ..............................
[2025-04-16 02:08:51] 2025-04-16 06:08:33,141 | INFO     | . Timing measurements:
[2025-04-16 02:08:51] 2025-04-16 06:08:33,141 | INFO     | . get job = 0 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,141 | INFO     | . initial setup = 2 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,141 | INFO     | . payload setup = 7 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,141 | INFO     | . stage-in = 0 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,141 | INFO     | . payload execution = 5028 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,142 | INFO     | . stage-out = 0 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,142 | INFO     | . log creation = 0 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,142 | INFO     | ..............................
[2025-04-16 02:08:51] 2025-04-16 06:08:33,224 | INFO     | 
[2025-04-16 02:08:51] 2025-04-16 06:08:33,225 | INFO     | job summary report
[2025-04-16 02:08:51] 2025-04-16 06:08:33,225 | INFO     | --------------------------------------------------
[2025-04-16 02:08:51] 2025-04-16 06:08:33,225 | INFO     | PanDA job id: 6603692509
[2025-04-16 02:08:51] 2025-04-16 06:08:33,225 | INFO     | task id: 44075483
[2025-04-16 02:08:51] 2025-04-16 06:08:33,225 | INFO     | errors: (none)
[2025-04-16 02:08:51] 2025-04-16 06:08:33,226 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 02:08:51] 2025-04-16 06:08:33,226 | INFO     | pilot state: finished 
[2025-04-16 02:08:51] 2025-04-16 06:08:33,226 | INFO     | transexitcode: 0
[2025-04-16 02:08:51] 2025-04-16 06:08:33,226 | INFO     | exeerrorcode: 0
[2025-04-16 02:08:51] 2025-04-16 06:08:33,226 | INFO     | exeerrordiag: 
[2025-04-16 02:08:51] 2025-04-16 06:08:33,226 | INFO     | exitcode: 0
[2025-04-16 02:08:51] 2025-04-16 06:08:33,227 | INFO     | exitmsg: OK
[2025-04-16 02:08:51] 2025-04-16 06:08:33,227 | INFO     | cpuconsumptiontime: 47787 s
[2025-04-16 02:08:51] 2025-04-16 06:08:33,227 | INFO     | nevents: 400
[2025-04-16 02:08:51] 2025-04-16 06:08:33,227 | INFO     | neventsw: 0
[2025-04-16 02:08:51] 2025-04-16 06:08:33,227 | INFO     | pid: 17443
[2025-04-16 02:08:51] 2025-04-16 06:08:33,227 | INFO     | pgrp: 17443
[2025-04-16 02:08:51] 2025-04-16 06:08:33,228 | INFO     | corecount: 12
[2025-04-16 02:08:51] 2025-04-16 06:08:33,228 | INFO     | event service: False
[2025-04-16 02:08:51] 2025-04-16 06:08:33,228 | INFO     | sizes: {0: 2417194, 1: 2417393, 6: 2417599, 12: 2417627, 5037: 2443804, 5039: 2452745, 5041: 2452929, 5048: 2453099}
[2025-04-16 02:08:51] 2025-04-16 06:08:33,228 | INFO     | --------------------------------------------------
[2025-04-16 02:08:51] 2025-04-16 06:08:33,228 | INFO     | 
[2025-04-16 02:08:51] 2025-04-16 06:08:33,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-16 02:08:51] 2025-04-16 06:08:33,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 02:08:51] 2025-04-16 06:08:33,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 02:08:51] 2025-04-16 06:08:33,255 | INFO     | job 6603692509 has completed (purged errors)
[2025-04-16 02:08:51] 2025-04-16 06:08:33,256 | INFO     | overall cleanup function is called
[2025-04-16 02:08:51] 2025-04-16 06:08:34,264 | INFO     | --- collectZombieJob: --- 10, [17443]
[2025-04-16 02:08:51] 2025-04-16 06:08:34,264 | INFO     | zombie collector waiting for pid 17443
[2025-04-16 02:08:51] 2025-04-16 06:08:34,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 02:08:51] 2025-04-16 06:08:34,265 | INFO     | collected zombie processes
[2025-04-16 02:08:51] 2025-04-16 06:08:34,265 | INFO     | will attempt to kill all subprocesses of pid=17443
[2025-04-16 02:08:51] 2025-04-16 06:08:34,357 | INFO     | process IDs to be killed: [17443] (in reverse order)
[2025-04-16 02:08:51] 2025-04-16 06:08:34,438 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 02:08:51] 2025-04-16 06:08:34,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 02:08:51] 2025-04-16 06:08:34,440 | INFO     | did not find any defunct processes belonging to 17443
[2025-04-16 02:08:51] 2025-04-16 06:08:34,442 | INFO     | did not find any defunct processes belonging to 17443
[2025-04-16 02:08:51] 2025-04-16 06:08:34,442 | INFO     | ready for new job
[2025-04-16 02:08:51] 2025-04-16 06:08:34,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 02:08:51] 2025-04-16 06:08:34,444 | INFO     | **************************************
[2025-04-16 02:08:51] 2025-04-16 06:08:34,444 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 02:08:51] 2025-04-16 06:08:34,444 | INFO     | **************************************
[2025-04-16 02:08:51] 2025-04-16 06:08:34,444 | INFO     | 
[2025-04-16 02:08:51] 2025-04-16 06:08:34,445 | INFO     | architecture information:
[2025-04-16 02:08:51] 2025-04-16 06:08:34,445 | INFO     | executing command: cat /etc/os-release
[2025-04-16 02:08:51] 2025-04-16 06:08:34,459 | INFO     | cat /etc/os-release:
[2025-04-16 02:08:51] NAME="CentOS Linux"
[2025-04-16 02:08:51] VERSION="7 (Core)"
[2025-04-16 02:08:51] ID="centos"
[2025-04-16 02:08:51] ID_LIKE="rhel fedora"
[2025-04-16 02:08:51] VERSION_ID="7"
[2025-04-16 02:08:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 02:08:51] ANSI_COLOR="0;31"
[2025-04-16 02:08:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 02:08:51] HOME_URL="https://www.centos.org/"
[2025-04-16 02:08:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 02:08:51] 
[2025-04-16 02:08:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 02:08:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 02:08:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 02:08:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 02:08:51] 
[2025-04-16 02:08:51] 2025-04-16 06:08:34,460 | INFO     | **************************************
[2025-04-16 02:08:51] 2025-04-16 06:08:34,963 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-16 02:08:51] 2025-04-16 06:08:34,978 | INFO     | sufficient remaining disk space (29385293824 B)
[2025-04-16 02:08:51] 2025-04-16 06:08:34,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 02:08:51] 2025-04-16 06:08:34,978 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 02:08:51] 2025-04-16 06:08:34,979 | INFO     | update_server=False
[2025-04-16 02:08:51] 2025-04-16 06:08:34,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 02:08:51] 2025-04-16 06:08:34,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 02:08:51] 2025-04-16 06:08:34,979 | INFO     | aborting loop
[2025-04-16 02:08:51] 2025-04-16 06:08:34,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 02:08:51] 2025-04-16 06:08:34,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 02:08:51] 2025-04-16 06:08:35,364 | INFO     | all data control threads have been joined
[2025-04-16 02:08:51] 2025-04-16 06:08:35,412 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 02:08:51] 2025-04-16 06:08:35,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 02:08:51] 2025-04-16 06:08:35,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 02:08:51] 2025-04-16 06:08:35,448 | INFO     | all payload control threads have been joined
[2025-04-16 02:08:51] 2025-04-16 06:08:35,980 | INFO     | [job] job monitor thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:35,984 | INFO     | [job] retrieve thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:35,985 | INFO     | [job] queue monitor thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:35,999 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:36,041 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:36,098 | INFO     | all job control threads have been joined
[2025-04-16 02:08:51] 2025-04-16 06:08:36,128 | INFO     | [payload] failed_post thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:36,295 | INFO     | [data] copytool_in thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:36,369 | INFO     | [data] control thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:36,450 | INFO     | [payload] control thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:36,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 02:08:51] 2025-04-16 06:08:36,985 | INFO     | [data] copytool_out thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:37,062 | INFO     | [payload] validate_post thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:37,100 | INFO     | [job] control thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:37,307 | INFO     | [job] validate thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:37,456 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:40,483 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:45,117 | INFO     | job.realtimelogging is not enabled
[2025-04-16 02:08:51] 2025-04-16 06:08:46,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 02:08:51] 2025-04-16 06:08:46,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624159516480)>', '<ExcThread(monitor, started 139623707682560)>']
[2025-04-16 02:08:51] 2025-04-16 06:08:46,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 02:08:51] 2025-04-16 06:08:46,464 | INFO     | [monitor] control thread has ended
[2025-04-16 02:08:51] 2025-04-16 06:08:51,392 | INFO     | all workflow threads have been joined
[2025-04-16 02:08:51] 2025-04-16 06:08:51,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 02:08:51] 2025-04-16 06:08:51,395 | INFO     | traces error code: 0
[2025-04-16 02:08:51] 2025-04-16 06:08:51,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 02:08:51] 2025-04-16 06:08:51,482 [wrapper] ==== pilot stdout END ====
[2025-04-16 02:08:51] 2025-04-16 06:08:51,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 02:08:51] 2025-04-16 06:08:51,490 [wrapper] pilotpid: 11099
[2025-04-16 02:08:51] 2025-04-16 06:08:51,495 [wrapper] Pilot exit status: 0
[2025-04-16 02:08:51] 2025-04-16 06:08:51,511 [wrapper] pandaids: 6603692509
[2025-04-16 02:08:51] 2025-04-16 06:08:51,549 [wrapper] cleanup supervisor_pilot   480 11100
[2025-04-16 02:08:51] 2025-04-16 06:08:51,553 [wrapper] Test setup, not cleaning
[2025-04-16 02:08:51] 2025-04-16 06:08:51,557 [wrapper] apfmon messages muted
[2025-04-16 02:08:51] 2025-04-16 06:08:51,561 [wrapper] ==== wrapper stdout END ====
[2025-04-16 02:08:51] 2025-04-16 06:08:51,565 [wrapper] ==== wrapper stderr END ====
[2025-04-16 02:08:51]  *** Error codes and diagnostics ***
[2025-04-16 02:08:51]     "exeErrorCode": 0,
[2025-04-16 02:08:51]     "exeErrorDiag": "",
[2025-04-16 02:08:51]     "pilotErrorCode": 0,
[2025-04-16 02:08:51]     "pilotErrorDiag": "",
[2025-04-16 02:08:51]  *** Listing of results directory ***
[2025-04-16 02:08:51] total 420304
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 15:01 pilot3.tar.gz
[2025-04-16 02:08:51] -rwx------ 1 boincer umatlas     37140 Apr 15 15:07 runpilot2-wrapper.sh
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 15:07 queuedata.json
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas       100 Apr 16 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 02:08:51] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 00:43 run_atlas
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas       105 Apr 16 00:43 job.xml
[2025-04-16 02:08:51] -rw-r--r-- 2 boincer umatlas 226844698 Apr 16 00:43 EVNT.44075481._001220.pool.root.1
[2025-04-16 02:08:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 00:43 start_atlas.sh
[2025-04-16 02:08:51] drwxrwx--x 2 boincer umatlas      4096 Apr 16 00:43 shared
[2025-04-16 02:08:51] -rw-r--r-- 2 boincer umatlas    508887 Apr 16 00:43 input.tar.gz
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas         0 Apr 16 00:43 boinc_lockfile
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas      2578 Apr 16 00:43 pandaJob.out
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas       424 Apr 16 00:43 setup.sh.local
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas    986044 Apr 16 00:44 agis_schedconf.cvmfs.json
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas   1603529 Apr 16 00:44 agis_ddmendpoints.agis.ALL.json
[2025-04-16 02:08:51] drwx------ 4 boincer umatlas      4096 Apr 16 00:44 pilot3
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas      5868 Apr 16 02:02 init_data.xml
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas 197981904 Apr 16 02:07 HITS.44075483._031166.pool.root.1
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas       530 Apr 16 02:08 boinc_task_state.xml
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas        95 Apr 16 02:08 pilot_heartbeat.json
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas      1047 Apr 16 02:08 memory_monitor_summary.json
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas    381482 Apr 16 02:08 log.44075483._031166.job.log.tgz.1
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas      7750 Apr 16 02:08 heartbeat.json
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas        27 Apr 16 02:08 wrapper_checkpoint.txt
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 02:08 boinc_mmap_file
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas      4425 Apr 16 02:08 pilotlog.txt
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas    479397 Apr 16 02:08 log.44075483._031166.job.log.1
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas       357 Apr 16 02:08 output.list
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas       620 Apr 16 02:08 runtime_log
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas    880640 Apr 16 02:08 result.tar.gz
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas     11015 Apr 16 02:08 runtime_log.err
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas       658 Apr 16 02:08 8a4LDmEo0O7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmMk1KDmjCHXFo.diag
[2025-04-16 02:08:51] -rw-r--r-- 1 boincer umatlas     21565 Apr 16 02:08 stderr.txt
[2025-04-16 02:08:51] HITS file was successfully produced:
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas 197981904 Apr 16 02:07 shared/HITS.pool.root.1
[2025-04-16 02:08:51]  *** Contents of shared directory: ***
[2025-04-16 02:08:51] total 416256
[2025-04-16 02:08:51] -rw-r--r-- 2 boincer umatlas 226844698 Apr 16 00:43 ATLAS.root_0
[2025-04-16 02:08:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 00:43 start_atlas.sh
[2025-04-16 02:08:51] -rw-r--r-- 2 boincer umatlas    508887 Apr 16 00:43 input.tar.gz
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas 197981904 Apr 16 02:07 HITS.pool.root.1
[2025-04-16 02:08:51] -rw------- 1 boincer umatlas    880640 Apr 16 02:08 result.tar.gz
02:08:53 (7439): run_atlas exited; CPU time 47773.081118
02:08:53 (7439): called boinc_finish(0)

</stderr_txt>
]]>

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