Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:43:06 (395587): wrapper (7.7.26015): starting
09:43:06 (395587): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 09:43:06] Arguments: --nthreads 12
[2025-04-16 09:43:06] Threads: 12
[2025-04-16 09:43:06] Checking for CVMFS
[2025-04-16 09:43:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 09:43:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 09:43:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 09:43:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 09:43:07] 2.12.7.0 9969 21982 343332 144918 1 187 28473702 46080001 6445 130560 130 226008200 99.949 41175901 3747 http://sampacs01.if.usp.br:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-16 09:43:07] CVMFS is ok
[2025-04-16 09:43:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 09:43:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 09:43:07] Further information can be found at the LHC@home message board.
[2025-04-16 09:43:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 09:43:07] Checking for apptainer binary...
[2025-04-16 09:43:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 09:43:07] Running /usr/bin/apptainer --version
[2025-04-16 09:43:07] apptainer version 1.3.6-1.el9
[2025-04-16 09:43:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 09:43:07] mff2104.farm.particle.cz
[2025-04-16 09:43:07] apptainer works
[2025-04-16 09:43:07] Set ATHENA_PROC_NUMBER=12
[2025-04-16 09:43:07] Set ATHENA_CORE_NUMBER=12
[2025-04-16 09:43:07] Starting ATLAS job with PandaID=6603692378
[2025-04-16 09:43:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 10:42:15]  *** The last 200 lines of the pilot log: ***
[2025-04-16 10:42:15]  guid=33b36c4f-605b-49c0-bf5a-be2dabac4c2b
[2025-04-16 10:42:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-16 10:42:15]  is_altstaged=None
[2025-04-16 10:42:15]  is_tar=False
[2025-04-16 10:42:15]  lfn=log.44075483._031035.job.log.tgz.1
[2025-04-16 10:42:15]  mtime=0
[2025-04-16 10:42:15]  protocol_id=None
[2025-04-16 10:42:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 10:42:15]  replicas=None
[2025-04-16 10:42:15]  scope=mc23_13p6TeV
[2025-04-16 10:42:15]  status=None
[2025-04-16 10:42:15]  status_code=0
[2025-04-16 10:42:15]  storage_token=
[2025-04-16 10:42:15]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6603692378/log.44075483._031035.job.log.tgz.1
[2025-04-16 10:42:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/17/log.44075483._031035.job.log.tgz.1
[2025-04-16 10:42:15]  workdir=None
[2025-04-16 10:42:15] ]
[2025-04-16 10:42:15] 2025-04-16 08:41:51,711 | INFO     | transferring file log.44075483._031035.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6603692378/log.44075483._031035.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-16 10:42:15] 2025-04-16 08:41:51,712 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6603692378/log.44075483._031035.job.log.tgz.1 /scratch/.boinc/slots/1/log.44075483._031035.j
[2025-04-16 10:42:15] 2025-04-16 08:41:51,740 | INFO     | adding to output.list: log.44075483._031035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/17/log.44075483._031035.job.log.tg
[2025-04-16 10:42:15] 2025-04-16 08:41:51,741 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 10:42:15] 2025-04-16 08:41:51,741 | INFO     | summary of transferred files:
[2025-04-16 10:42:15] 2025-04-16 08:41:51,741 | INFO     |  -- lfn=log.44075483._031035.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 10:42:15] 2025-04-16 08:41:51,742 | INFO     | stage-out finished correctly
[2025-04-16 10:42:15] 2025-04-16 08:41:52,895 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 10:42:15] 2025-04-16 08:41:53,770 | INFO     | job 6603692378 has state=finished
[2025-04-16 10:42:15] 2025-04-16 08:41:53,771 | INFO     | preparing for final server update for job 6603692378 in state='finished'
[2025-04-16 10:42:15] 2025-04-16 08:41:53,772 | INFO     | this job has now completed (state=finished)
[2025-04-16 10:42:15] 2025-04-16 08:41:53,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 10:42:15] 2025-04-16 08:41:53,772 | INFO     | log transfer has been attempted: DONE
[2025-04-16 10:42:15] 2025-04-16 08:41:53,772 | INFO     | job 6603692378 has finished - writing final server update
[2025-04-16 10:42:15] 2025-04-16 08:41:53,773 | INFO     | total number of processed events: 400 (read)
[2025-04-16 10:42:15] 2025-04-16 08:41:53,780 | INFO     | executing command: lscpu
[2025-04-16 10:42:15] 2025-04-16 08:41:53,874 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 10:42:15] 2025-04-16 08:41:55,182 | WARNING  | process 408952 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 10:42:15] 2025-04-16 08:41:55,183 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6603692378/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 10:42:15] 2025-04-16 08:41:55,533 | INFO     | number of running child processes to parent process 408952: 1
[2025-04-16 10:42:15] 2025-04-16 08:41:55,534 | INFO     | maximum number of monitored processes: 6
[2025-04-16 10:42:15] 2025-04-16 08:41:58,037 | INFO     | monitor loop #259: job 0:6603692378 is in state 'finished'
[2025-04-16 10:42:15] 2025-04-16 08:41:58,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 10:42:15] 2025-04-16 08:41:59,426 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-16 10:42:15] 2025-04-16 08:41:59,426 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6603692378/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 10:42:15] 2025-04-16 08:41:59,427 | INFO     | extracted standard info from prmon json
[2025-04-16 10:42:15] 2025-04-16 08:41:59,427 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 10:42:15] 2025-04-16 08:41:59,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 10:42:15] 2025-04-16 08:41:59,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 10:42:15] 2025-04-16 08:41:59,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 10:42:15] 2025-04-16 08:41:59,429 | INFO     | fitting pss+swap vs Time
[2025-04-16 10:42:15] 2025-04-16 08:41:59,429 | INFO     | sum of square deviations: 41118761.921568595
[2025-04-16 10:42:15] 2025-04-16 08:41:59,429 | INFO     | sum of deviations: 12523900242.156864
[2025-04-16 10:42:15] 2025-04-16 08:41:59,430 | INFO     | mean x: 1744791257.0392158
[2025-04-16 10:42:15] 2025-04-16 08:41:59,430 | INFO     | mean y: 2525576.9215686275
[2025-04-16 10:42:15] 2025-04-16 08:41:59,430 | INFO     | -- intersect: -531423777778.88293
[2025-04-16 10:42:15] 2025-04-16 08:41:59,430 | INFO     | intersect: -531423777778.88293
[2025-04-16 10:42:15] 2025-04-16 08:41:59,430 | INFO     | chi2: 1.7730458420878865
[2025-04-16 10:42:15] 2025-04-16 08:41:59,430 | INFO     | -- intersect: -531423777778.88293
[2025-04-16 10:42:15] 2025-04-16 08:41:59,430 | INFO     | current memory leak: 304.58 B/s (using 51 data points, chi2=1.77)
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | ..............................
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . Timing measurements:
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . get job = 0 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . initial setup = 1 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . payload setup = 6 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . stage-in = 0 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . payload execution = 3484 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . stage-out = 0 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | . log creation = 0 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,431 | INFO     | ..............................
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | 
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | job summary report
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | --------------------------------------------------
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | PanDA job id: 6603692378
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | task id: 44075483
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | errors: (none)
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 10:42:15] 2025-04-16 08:41:59,531 | INFO     | pilot state: finished 
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | transexitcode: 0
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | exeerrorcode: 0
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | exeerrordiag: 
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | exitcode: 0
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | exitmsg: OK
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | cpuconsumptiontime: 31649 s
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | nevents: 400
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | neventsw: 0
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | pid: 408952
[2025-04-16 10:42:15] 2025-04-16 08:41:59,532 | INFO     | pgrp: 408952
[2025-04-16 10:42:15] 2025-04-16 08:41:59,533 | INFO     | corecount: 12
[2025-04-16 10:42:15] 2025-04-16 08:41:59,533 | INFO     | event service: False
[2025-04-16 10:42:15] 2025-04-16 08:41:59,533 | INFO     | sizes: {0: 2416538, 1: 2417395, 6: 2417601, 12: 2417629, 3494: 2443274, 3495: 2443273, 3497: 2452400, 3498: 2452456, 3505: 2452626}
[2025-04-16 10:42:15] 2025-04-16 08:41:59,533 | INFO     | --------------------------------------------------
[2025-04-16 10:42:15] 2025-04-16 08:41:59,533 | INFO     | 
[2025-04-16 10:42:15] 2025-04-16 08:41:59,533 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-04-16 10:42:15] 2025-04-16 08:41:59,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 10:42:15] 2025-04-16 08:41:59,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 10:42:15] 2025-04-16 08:41:59,562 | INFO     | job 6603692378 has completed (purged errors)
[2025-04-16 10:42:15] 2025-04-16 08:41:59,562 | INFO     | overall cleanup function is called
[2025-04-16 10:42:15] 2025-04-16 08:42:00,570 | INFO     | --- collectZombieJob: --- 10, [408952]
[2025-04-16 10:42:15] 2025-04-16 08:42:00,570 | INFO     | zombie collector waiting for pid 408952
[2025-04-16 10:42:15] 2025-04-16 08:42:00,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 10:42:15] 2025-04-16 08:42:00,570 | INFO     | collected zombie processes
[2025-04-16 10:42:15] 2025-04-16 08:42:00,570 | INFO     | will attempt to kill all subprocesses of pid=408952
[2025-04-16 10:42:15] 2025-04-16 08:42:00,921 | INFO     | process IDs to be killed: [408952] (in reverse order)
[2025-04-16 10:42:15] 2025-04-16 08:42:01,037 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 10:42:15] 2025-04-16 08:42:01,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 10:42:15] 2025-04-16 08:42:01,050 | INFO     | did not find any defunct processes belonging to 408952
[2025-04-16 10:42:15] 2025-04-16 08:42:01,060 | INFO     | did not find any defunct processes belonging to 408952
[2025-04-16 10:42:15] 2025-04-16 08:42:01,061 | INFO     | ready for new job
[2025-04-16 10:42:15] 2025-04-16 08:42:01,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 10:42:15] 2025-04-16 08:42:01,063 | INFO     | **************************************
[2025-04-16 10:42:15] 2025-04-16 08:42:01,063 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 10:42:15] 2025-04-16 08:42:01,063 | INFO     | **************************************
[2025-04-16 10:42:15] 2025-04-16 08:42:01,063 | INFO     | 
[2025-04-16 10:42:15] 2025-04-16 08:42:01,069 | INFO     | architecture information:
[2025-04-16 10:42:15] 2025-04-16 08:42:01,069 | INFO     | executing command: cat /etc/os-release
[2025-04-16 10:42:15] 2025-04-16 08:42:01,090 | INFO     | cat /etc/os-release:
[2025-04-16 10:42:15] NAME="CentOS Linux"
[2025-04-16 10:42:15] VERSION="7 (Core)"
[2025-04-16 10:42:15] ID="centos"
[2025-04-16 10:42:15] ID_LIKE="rhel fedora"
[2025-04-16 10:42:15] VERSION_ID="7"
[2025-04-16 10:42:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 10:42:15] ANSI_COLOR="0;31"
[2025-04-16 10:42:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 10:42:15] HOME_URL="https://www.centos.org/"
[2025-04-16 10:42:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 10:42:15] 
[2025-04-16 10:42:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 10:42:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 10:42:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 10:42:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 10:42:15] 
[2025-04-16 10:42:15] 2025-04-16 08:42:01,091 | INFO     | **************************************
[2025-04-16 10:42:15] 2025-04-16 08:42:01,594 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-04-16 10:42:15] 2025-04-16 08:42:01,658 | INFO     | sufficient remaining disk space (1680822239232 B)
[2025-04-16 10:42:15] 2025-04-16 08:42:01,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 10:42:15] 2025-04-16 08:42:01,658 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 10:42:15] 2025-04-16 08:42:01,659 | INFO     | update_server=False
[2025-04-16 10:42:15] 2025-04-16 08:42:01,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 10:42:15] 2025-04-16 08:42:01,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 10:42:15] 2025-04-16 08:42:01,659 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 10:42:15] 2025-04-16 08:42:01,660 | INFO     | aborting loop
[2025-04-16 10:42:15] 2025-04-16 08:42:01,661 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 10:42:15] 2025-04-16 08:42:01,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 10:42:15] 2025-04-16 08:42:01,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 10:42:15] 2025-04-16 08:42:01,980 | INFO     | all data control threads have been joined
[2025-04-16 10:42:15] 2025-04-16 08:42:02,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 10:42:15] 2025-04-16 08:42:02,405 | INFO     | all job control threads have been joined
[2025-04-16 10:42:15] 2025-04-16 08:42:02,664 | INFO     | [job] retrieve thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:02,666 | INFO     | [job] job monitor thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:02,734 | INFO     | [payload] failed_post thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:02,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:02,796 | INFO     | all payload control threads have been joined
[2025-04-16 10:42:15] 2025-04-16 08:42:02,985 | INFO     | [data] control thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,091 | INFO     | [data] copytool_in thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,328 | INFO     | [payload] validate_post thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,351 | INFO     | [job] validate thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,381 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,410 | INFO     | [job] control thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 10:42:15] 2025-04-16 08:42:03,619 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,706 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:03,801 | INFO     | [payload] control thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:04,359 | INFO     | [data] copytool_out thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:04,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 10:42:15] 2025-04-16 08:42:05,547 | INFO     | [job] queue monitor thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:07,508 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 10:42:15] 2025-04-16 08:42:09,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653750945600)>', '<ExcThread(monitor, started 139653260760832)>']
[2025-04-16 10:42:15] 2025-04-16 08:42:09,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 10:42:15] 2025-04-16 08:42:09,701 | INFO     | [monitor] control thread has ended
[2025-04-16 10:42:15] 2025-04-16 08:42:14,628 | INFO     | all workflow threads have been joined
[2025-04-16 10:42:15] 2025-04-16 08:42:14,629 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 10:42:15] 2025-04-16 08:42:14,629 | INFO     | traces error code: 0
[2025-04-16 10:42:15] 2025-04-16 08:42:14,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 10:42:15] 2025-04-16 08:42:14,761 [wrapper] ==== pilot stdout END ====
[2025-04-16 10:42:15] 2025-04-16 08:42:14,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 10:42:15] 2025-04-16 08:42:14,769 [wrapper] pilotpid: 399604
[2025-04-16 10:42:15] 2025-04-16 08:42:14,773 [wrapper] Pilot exit status: 0
[2025-04-16 10:42:15] 2025-04-16 08:42:14,788 [wrapper] pandaids: 6603692378
[2025-04-16 10:42:15] 2025-04-16 08:42:14,869 [wrapper] cleanup supervisor_pilot  598677 399605
[2025-04-16 10:42:15] 2025-04-16 08:42:14,874 [wrapper] Test setup, not cleaning
[2025-04-16 10:42:15] 2025-04-16 08:42:14,878 [wrapper] apfmon messages muted
[2025-04-16 10:42:15] 2025-04-16 08:42:14,882 [wrapper] ==== wrapper stdout END ====
[2025-04-16 10:42:15] 2025-04-16 08:42:14,885 [wrapper] ==== wrapper stderr END ====
[2025-04-16 10:42:15]  *** Error codes and diagnostics ***
[2025-04-16 10:42:15]     "exeErrorCode": 0,
[2025-04-16 10:42:15]     "exeErrorDiag": "",
[2025-04-16 10:42:15]     "pilotErrorCode": 0,
[2025-04-16 10:42:15]     "pilotErrorDiag": "",
[2025-04-16 10:42:15]  *** Listing of results directory ***
[2025-04-16 10:42:15] total 415132
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc    495897 Apr 15 20:48 pilot3.tar.gz
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc      5111 Apr 15 20:52 queuedata.json
[2025-04-16 10:42:15] -rwx------ 1 boinc boinc     37140 Apr 15 20:53 runpilot2-wrapper.sh
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc       100 Apr 16 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 10:42:15] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 09:43 run_atlas
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc       105 Apr 16 09:43 job.xml
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc      6654 Apr 16 09:43 init_data.xml
[2025-04-16 10:42:15] -rw-r--r-- 2 boinc boinc 225558367 Apr 16 09:43 EVNT.44075481._001215.pool.root.1
[2025-04-16 10:42:15] -rw-r--r-- 2 boinc boinc     17569 Apr 16 09:43 start_atlas.sh
[2025-04-16 10:42:15] drwxrwx--x 2 boinc boinc      4096 Apr 16 09:43 shared
[2025-04-16 10:42:15] -rw-r--r-- 2 boinc boinc    508897 Apr 16 09:43 input.tar.gz
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc         0 Apr 16 09:43 boinc_lockfile
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc      2579 Apr 16 09:43 pandaJob.out
[2025-04-16 10:42:15] -rw------- 1 boinc boinc       424 Apr 16 09:43 setup.sh.local
[2025-04-16 10:42:15] -rw------- 1 boinc boinc    985908 Apr 16 09:43 agis_schedconf.cvmfs.json
[2025-04-16 10:42:15] -rw------- 1 boinc boinc   1603529 Apr 16 09:43 agis_ddmendpoints.agis.ALL.json
[2025-04-16 10:42:15] drwx------ 4 boinc boinc      4096 Apr 16 09:43 pilot3
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc       530 Apr 16 10:41 boinc_task_state.xml
[2025-04-16 10:42:15] -rw------- 1 boinc boinc 194272472 Apr 16 10:41 HITS.44075483._031035.pool.root.1
[2025-04-16 10:42:15] -rw------- 1 boinc boinc        95 Apr 16 10:41 pilot_heartbeat.json
[2025-04-16 10:42:15] -rw------- 1 boinc boinc      1022 Apr 16 10:41 memory_monitor_summary.json
[2025-04-16 10:42:15] -rw------- 1 boinc boinc    357229 Apr 16 10:41 log.44075483._031035.job.log.tgz.1
[2025-04-16 10:42:15] -rw------- 1 boinc boinc      7698 Apr 16 10:41 heartbeat.json
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc        27 Apr 16 10:42 wrapper_checkpoint.txt
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc      8192 Apr 16 10:42 boinc_mmap_file
[2025-04-16 10:42:15] -rw------- 1 boinc boinc      4479 Apr 16 10:42 pilotlog.txt
[2025-04-16 10:42:15] -rw------- 1 boinc boinc    355681 Apr 16 10:42 log.44075483._031035.job.log.1
[2025-04-16 10:42:15] -rw------- 1 boinc boinc       357 Apr 16 10:42 output.list
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc       620 Apr 16 10:42 runtime_log
[2025-04-16 10:42:15] -rw------- 1 boinc boinc    727040 Apr 16 10:42 result.tar.gz
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc     11078 Apr 16 10:42 runtime_log.err
[2025-04-16 10:42:15] -rw------- 1 boinc boinc       662 Apr 16 10:42 6tXMDmCa0O7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmmj1KDmyKDBom.diag
[2025-04-16 10:42:15] -rw-r--r-- 1 boinc boinc     21390 Apr 16 10:42 stderr.txt
[2025-04-16 10:42:15] HITS file was successfully produced:
[2025-04-16 10:42:15] -rw------- 1 boinc boinc 194272472 Apr 16 10:41 shared/HITS.pool.root.1
[2025-04-16 10:42:15]  *** Contents of shared directory: ***
[2025-04-16 10:42:15] total 411232
[2025-04-16 10:42:15] -rw-r--r-- 2 boinc boinc 225558367 Apr 16 09:43 ATLAS.root_0
[2025-04-16 10:42:15] -rw-r--r-- 2 boinc boinc     17569 Apr 16 09:43 start_atlas.sh
[2025-04-16 10:42:15] -rw-r--r-- 2 boinc boinc    508897 Apr 16 09:43 input.tar.gz
[2025-04-16 10:42:15] -rw------- 1 boinc boinc 194272472 Apr 16 10:41 HITS.pool.root.1
[2025-04-16 10:42:15] -rw------- 1 boinc boinc    727040 Apr 16 10:42 result.tar.gz
10:42:17 (395587): run_atlas exited; CPU time 31730.557169
10:42:17 (395587): called boinc_finish(0)

</stderr_txt>
]]>

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