Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:56:16 (89611): wrapper (7.7.26015): starting
15:56:16 (89611): wrapper: running run_atlas (--nthreads 2)
[2025-04-16 15:56:16] Arguments: --nthreads 2
[2025-04-16 15:56:16] Threads: 2
[2025-04-16 15:56:16] Checking for CVMFS
[2025-04-16 15:56:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 15:56:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 15:56:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 15:56:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 15:56:17] 2.9.2.0 2835 392 52436 144925 3 56 20129059 36864001 0 130560 0 226881 99.990 73012 28189 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-16 15:56:17] CVMFS is ok
[2025-04-16 15:56:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 15:56:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 15:56:17] Further information can be found at the LHC@home message board.
[2025-04-16 15:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 15:56:17] Checking for apptainer binary...
[2025-04-16 15:56:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 15:56:17] Running /usr/bin/apptainer --version
[2025-04-16 15:56:17] apptainer version 1.3.6-6.1
[2025-04-16 15:56:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 15:56:17] madmaxA277a
[2025-04-16 15:56:17] apptainer works
[2025-04-16 15:56:17] Set ATHENA_PROC_NUMBER=2
[2025-04-16 15:56:17] Set ATHENA_CORE_NUMBER=2
[2025-04-16 15:56:17] Starting ATLAS job with PandaID=6603697631
[2025-04-16 15:56:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 18:08:11]  *** The last 200 lines of the pilot log: ***
[2025-04-16 18:08:11] 2025-04-16 16:08:00,736 | INFO     | mean x: 1744815874.5
[2025-04-16 18:08:11] 2025-04-16 16:08:00,736 | INFO     | mean y: 2274943.6774193547
[2025-04-16 18:08:11] 2025-04-16 16:08:00,736 | INFO     | -- intersect: -48503718351.06515
[2025-04-16 18:08:11] 2025-04-16 16:08:00,736 | INFO     | intersect: -48503718351.06515
[2025-04-16 18:08:11] 2025-04-16 16:08:00,736 | INFO     | chi2: 1.100484370507233
[2025-04-16 18:08:11] 2025-04-16 16:08:00,736 | INFO     | current chi2=1.100484370507233 (change=62.40055832248832 %)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,736 | INFO     | sum of square deviations: 522502820.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | sum of deviations: -2519884440.999999
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | mean x: 1744816027.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | mean y: 2317050.7394957985
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | -- intersect: 8417075001.41378
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | intersect: 8417075001.41378
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | chi2: 0.08138507711950098
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | current chi2=0.08138507711950098 (change=92.60461308669116 %)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | sum of square deviations: 459366752.5
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | sum of deviations: 1969823590.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | mean x: 1744816179.5
[2025-04-16 18:08:11] 2025-04-16 16:08:00,737 | INFO     | mean y: 2306094.6315789474
[2025-04-16 18:08:11] 2025-04-16 16:08:00,738 | INFO     | -- intersect: -7479689613.346381
[2025-04-16 18:08:11] 2025-04-16 16:08:00,738 | INFO     | intersect: -7479689613.346381
[2025-04-16 18:08:11] 2025-04-16 16:08:00,738 | INFO     | chi2: 0.0052935949224666885
[2025-04-16 18:08:11] 2025-04-16 16:08:00,738 | INFO     | current chi2=0.0052935949224666885 (change=93.4956197010247 %)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,738 | INFO     | sum of square deviations: 401533110.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,738 | INFO     | sum of deviations: 1066961675.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,738 | INFO     | mean x: 1744816332.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | mean y: 2308473.623853211
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | -- intersect: -4634051791.057871
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | intersect: -4634051791.057871
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | chi2: 0.0034216664352376453
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | current chi2=0.0034216664352376453 (change=35.36214075021761 %)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | sum of square deviations: 348769330.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | sum of deviations: 604613882.9999999
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | mean x: 1744816484.5
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | mean y: 2309809.403846154
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | -- intersect: -3022440875.5716763
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | intersect: -3022440875.5716763
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | chi2: 0.0029901978364143245
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | current chi2=0.0029901978364143245 (change=12.609896580797303 %)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,739 | INFO     | left removable region: 50
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | sum of square deviations: 120605052.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | sum of deviations: -291025022.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | mean x: 1744817064.0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | mean y: 2311859.0684931506
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | -- intersect: 4212628226.550143
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | intersect: 4212628226.550143
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | chi2: 0.0020456280544634184
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | -- intersect: 4212628226.550143
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | current memory leak: -2.41 B/s (using 73 data points, chi2=0.00)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | sufficient remaining disk space (494253637632 B)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | ..............................
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | . Timing measurements:
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | . get job = 0 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,740 | INFO     | . initial setup = 1 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,741 | INFO     | . payload setup = 8 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,741 | INFO     | . stage-in = 0 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,741 | INFO     | . payload execution = 7851 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,741 | INFO     | . stage-out = 0 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,741 | INFO     | . log creation = 0 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,741 | INFO     | ..............................
[2025-04-16 18:08:11] 2025-04-16 16:08:00,770 | INFO     | 
[2025-04-16 18:08:11] 2025-04-16 16:08:00,770 | INFO     | job summary report
[2025-04-16 18:08:11] 2025-04-16 16:08:00,770 | INFO     | --------------------------------------------------
[2025-04-16 18:08:11] 2025-04-16 16:08:00,770 | INFO     | PanDA job id: 6603697631
[2025-04-16 18:08:11] 2025-04-16 16:08:00,770 | INFO     | task id: 44075483
[2025-04-16 18:08:11] 2025-04-16 16:08:00,770 | INFO     | errors: (none)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,770 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | pilot state: finished 
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | transexitcode: 0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | exeerrorcode: 0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | exeerrordiag: 
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | exitcode: 0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | exitmsg: OK
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | cpuconsumptiontime: 14488 s
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | nevents: 400
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | neventsw: 0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | pid: 99647
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | pgrp: 99647
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | corecount: 2
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | event service: False
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | sizes: {0: 2417369, 7: 2417575, 11: 2417603, 7863: 2454176, 7865: 2454176, 7874: 2454346}
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | --------------------------------------------------
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | 
[2025-04-16 18:08:11] 2025-04-16 16:08:00,771 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-16 18:08:11] 2025-04-16 16:08:00,773 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6603697631: 2623389 B (within 2537553920 B limit)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,773 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6603697631/HITS.44075483._033639.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,773 | INFO     | total size of present files: 0 B (workdir size: 2623389 B)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,773 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6603697631/HITS.44075483._033639.pool.root.1 since it does not exist
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | job 6603697631 has completed (purged errors)
[2025-04-16 18:08:11] 2025-04-16 16:08:00,782 | INFO     | overall cleanup function is called
[2025-04-16 18:08:11] 2025-04-16 16:08:00,807 | INFO     | number of running child processes to parent process 99647: 1
[2025-04-16 18:08:11] 2025-04-16 16:08:00,807 | INFO     | maximum number of monitored processes: 6
[2025-04-16 18:08:11] 2025-04-16 16:08:00,807 | INFO     | aborting job monitoring since job object (job id=6603697631) has expired
[2025-04-16 18:08:11] 2025-04-16 16:08:01,789 | INFO     | --- collectZombieJob: --- 10, [99647]
[2025-04-16 18:08:11] 2025-04-16 16:08:01,789 | INFO     | zombie collector waiting for pid 99647
[2025-04-16 18:08:11] 2025-04-16 16:08:01,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 18:08:11] 2025-04-16 16:08:01,790 | INFO     | collected zombie processes
[2025-04-16 18:08:11] 2025-04-16 16:08:01,790 | INFO     | will attempt to kill all subprocesses of pid=99647
[2025-04-16 18:08:11] 2025-04-16 16:08:01,823 | INFO     | process IDs to be killed: [99647] (in reverse order)
[2025-04-16 18:08:11] 2025-04-16 16:08:01,843 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 18:08:11] 2025-04-16 16:08:01,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 18:08:11] 2025-04-16 16:08:01,844 | INFO     | did not find any defunct processes belonging to 99647
[2025-04-16 18:08:11] 2025-04-16 16:08:01,844 | INFO     | did not find any defunct processes belonging to 99647
[2025-04-16 18:08:11] 2025-04-16 16:08:01,844 | INFO     | ready for new job
[2025-04-16 18:08:11] 2025-04-16 16:08:01,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 18:08:11] 2025-04-16 16:08:01,845 | INFO     | **************************************
[2025-04-16 18:08:11] 2025-04-16 16:08:01,845 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 18:08:11] 2025-04-16 16:08:01,845 | INFO     | **************************************
[2025-04-16 18:08:11] 2025-04-16 16:08:01,845 | INFO     | 
[2025-04-16 18:08:11] 2025-04-16 16:08:01,845 | INFO     | architecture information:
[2025-04-16 18:08:11] 2025-04-16 16:08:01,845 | INFO     | executing command: cat /etc/os-release
[2025-04-16 18:08:11] 2025-04-16 16:08:01,854 | INFO     | cat /etc/os-release:
[2025-04-16 18:08:11] NAME="CentOS Linux"
[2025-04-16 18:08:11] VERSION="7 (Core)"
[2025-04-16 18:08:11] ID="centos"
[2025-04-16 18:08:11] ID_LIKE="rhel fedora"
[2025-04-16 18:08:11] VERSION_ID="7"
[2025-04-16 18:08:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 18:08:11] ANSI_COLOR="0;31"
[2025-04-16 18:08:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 18:08:11] HOME_URL="https://www.centos.org/"
[2025-04-16 18:08:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 18:08:11] 
[2025-04-16 18:08:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 18:08:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 18:08:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 18:08:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 18:08:11] 
[2025-04-16 18:08:11] 2025-04-16 16:08:01,854 | INFO     | **************************************
[2025-04-16 18:08:11] 2025-04-16 16:08:02,357 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | INFO     | sufficient remaining disk space (494256783360 B)
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | INFO     | update_server=False
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 18:08:11] 2025-04-16 16:08:02,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 18:08:11] 2025-04-16 16:08:02,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 18:08:11] 2025-04-16 16:08:02,370 | INFO     | aborting loop
[2025-04-16 18:08:11] 2025-04-16 16:08:02,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 18:08:11] 2025-04-16 16:08:02,664 | INFO     | all payload control threads have been joined
[2025-04-16 18:08:11] 2025-04-16 16:08:03,052 | INFO     | all data control threads have been joined
[2025-04-16 18:08:11] 2025-04-16 16:08:03,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 18:08:11] 2025-04-16 16:08:03,375 | INFO     | [job] retrieve thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:03,376 | INFO     | [job] job monitor thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:03,376 | INFO     | [job] queue monitor thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:03,619 | INFO     | [job] validate thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:03,670 | INFO     | [payload] control thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:03,723 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:03,780 | INFO     | all job control threads have been joined
[2025-04-16 18:08:11] 2025-04-16 16:08:03,823 | INFO     | [payload] validate_post thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:04,058 | INFO     | [data] control thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:04,155 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:04,228 | INFO     | [payload] failed_post thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:04,492 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:04,617 | INFO     | [data] copytool_in thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:04,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:04,786 | INFO     | [job] control thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:05,318 | INFO     | [data] copytool_out thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:06,468 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 18:08:11] 2025-04-16 16:08:06,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521560827712)>', '<ExcThread(monitor, started 140520768653056)>']
[2025-04-16 18:08:11] 2025-04-16 16:08:07,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 18:08:11] 2025-04-16 16:08:07,436 | INFO     | [monitor] control thread has ended
[2025-04-16 18:08:11] 2025-04-16 16:08:11,652 | INFO     | all workflow threads have been joined
[2025-04-16 18:08:11] 2025-04-16 16:08:11,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 18:08:11] 2025-04-16 16:08:11,653 | INFO     | traces error code: 0
[2025-04-16 18:08:11] 2025-04-16 16:08:11,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 18:08:11] 2025-04-16 16:08:11,695 [wrapper] ==== pilot stdout END ====
[2025-04-16 18:08:11] 2025-04-16 16:08:11,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 18:08:11] 2025-04-16 16:08:11,700 [wrapper] pilotpid: 93241
[2025-04-16 18:08:11] 2025-04-16 16:08:11,702 [wrapper] Pilot exit status: 0
[2025-04-16 18:08:11] 2025-04-16 16:08:11,709 [wrapper] pandaids: 6603697631
[2025-04-16 18:08:11] 2025-04-16 16:08:11,721 [wrapper] cleanup supervisor_pilot  113799 93242
[2025-04-16 18:08:11] 2025-04-16 16:08:11,723 [wrapper] Test setup, not cleaning
[2025-04-16 18:08:11] 2025-04-16 16:08:11,726 [wrapper] apfmon messages muted
[2025-04-16 18:08:11] 2025-04-16 16:08:11,728 [wrapper] ==== wrapper stdout END ====
[2025-04-16 18:08:11] 2025-04-16 16:08:11,729 [wrapper] ==== wrapper stderr END ====
[2025-04-16 18:08:11]  *** Error codes and diagnostics ***
[2025-04-16 18:08:11]     "exeErrorCode": 0,
[2025-04-16 18:08:11]     "exeErrorDiag": "",
[2025-04-16 18:08:11]     "pilotErrorCode": 0,
[2025-04-16 18:08:11]     "pilotErrorDiag": "",
[2025-04-16 18:08:11]  *** Listing of results directory ***
[2025-04-16 18:08:11] total 409728
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc    495897 Apr 16 01:36 pilot3.tar.gz
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc      5111 Apr 16 01:54 queuedata.json
[2025-04-16 18:08:11] -rwx------ 1 boinc boinc     37140 Apr 16 01:56 runpilot2-wrapper.sh
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc       100 Apr 16 15:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 18:08:11] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 15:56 run_atlas
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc       105 Apr 16 15:56 job.xml
[2025-04-16 18:08:11] -rw-r--r-- 2 boinc boinc 222080447 Apr 16 15:56 EVNT.44075481._001319.pool.root.1
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc      6693 Apr 16 15:56 init_data.xml
[2025-04-16 18:08:11] drwxrwx--x 2 boinc boinc      4096 Apr 16 15:56 shared
[2025-04-16 18:08:11] -rw-r--r-- 2 boinc boinc    508892 Apr 16 15:56 input.tar.gz
[2025-04-16 18:08:11] -rw-r--r-- 2 boinc boinc     17569 Apr 16 15:56 start_atlas.sh
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc         0 Apr 16 15:56 boinc_lockfile
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc      2579 Apr 16 15:56 pandaJob.out
[2025-04-16 18:08:11] -rw------- 1 boinc boinc       424 Apr 16 15:56 setup.sh.local
[2025-04-16 18:08:11] -rw------- 1 boinc boinc    986552 Apr 16 15:56 agis_schedconf.cvmfs.json
[2025-04-16 18:08:11] -rw------- 1 boinc boinc   1603529 Apr 16 15:56 agis_ddmendpoints.agis.ALL.json
[2025-04-16 18:08:11] drwx------ 4 boinc boinc      4096 Apr 16 15:56 pilot3
[2025-04-16 18:08:11] -rw------- 1 boinc boinc        95 Apr 16 18:07 pilot_heartbeat.json
[2025-04-16 18:08:11] -rw------- 1 boinc boinc 191567732 Apr 16 18:07 HITS.44075483._033639.pool.root.1
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc       529 Apr 16 18:07 boinc_task_state.xml
[2025-04-16 18:08:11] -rw------- 1 boinc boinc      1020 Apr 16 18:07 memory_monitor_summary.json
[2025-04-16 18:08:11] -rw------- 1 boinc boinc    252586 Apr 16 18:07 log.44075483._033639.job.log.tgz.1
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc      8192 Apr 16 18:07 boinc_mmap_file
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc        27 Apr 16 18:07 wrapper_checkpoint.txt
[2025-04-16 18:08:11] -rw------- 1 boinc boinc      7666 Apr 16 18:08 heartbeat.json
[2025-04-16 18:08:11] -rw------- 1 boinc boinc      4480 Apr 16 18:08 pilotlog.txt
[2025-04-16 18:08:11] -rw------- 1 boinc boinc    779895 Apr 16 18:08 log.44075483._033639.job.log.1
[2025-04-16 18:08:11] -rw------- 1 boinc boinc       357 Apr 16 18:08 output.list
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc       620 Apr 16 18:08 runtime_log
[2025-04-16 18:08:11] -rw------- 1 boinc boinc   1054720 Apr 16 18:08 result.tar.gz
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc     11124 Apr 16 18:08 runtime_log.err
[2025-04-16 18:08:11] -rw------- 1 boinc boinc       664 Apr 16 18:08 8TcLDmgJ5O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDAZLDmJxRX7n.diag
[2025-04-16 18:08:11] -rw-r--r-- 1 boinc boinc     21188 Apr 16 18:08 stderr.txt
[2025-04-16 18:08:11] HITS file was successfully produced:
[2025-04-16 18:08:11] -rw------- 1 boinc boinc 191567732 Apr 16 18:07 shared/HITS.pool.root.1
[2025-04-16 18:08:11]  *** Contents of shared directory: ***
[2025-04-16 18:08:11] total 405516
[2025-04-16 18:08:11] -rw-r--r-- 2 boinc boinc 222080447 Apr 16 15:56 ATLAS.root_0
[2025-04-16 18:08:11] -rw-r--r-- 2 boinc boinc    508892 Apr 16 15:56 input.tar.gz
[2025-04-16 18:08:11] -rw-r--r-- 2 boinc boinc     17569 Apr 16 15:56 start_atlas.sh
[2025-04-16 18:08:11] -rw------- 1 boinc boinc 191567732 Apr 16 18:07 HITS.pool.root.1
[2025-04-16 18:08:11] -rw------- 1 boinc boinc   1054720 Apr 16 18:08 result.tar.gz
18:08:13 (89611): run_atlas exited; CPU time 14520.562686
18:08:13 (89611): called boinc_finish(0)

</stderr_txt>
]]>

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