Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:22:08 (2303614): wrapper (7.7.26015): starting
23:22:08 (2303614): wrapper: running run_atlas (--nthreads 10)
[2025-04-15 23:22:08] Arguments: --nthreads 10
[2025-04-15 23:22:08] Threads: 10
[2025-04-15 23:22:08] Checking for CVMFS
[2025-04-15 23:22:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 23:22:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 23:22:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 23:22:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 23:22:12] 2.12.6.0 3646663 20712 217652 144913 2 185 24950566 32935937 19246 16776704 0 90356215 99.617 91252023 21463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-15 23:22:12] CVMFS is ok
[2025-04-15 23:22:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 23:22:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 23:22:12] Further information can be found at the LHC@home message board.
[2025-04-15 23:22:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 23:22:12] Checking for apptainer binary...
[2025-04-15 23:22:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 23:22:12] Running /usr/bin/apptainer --version
[2025-04-15 23:22:12] apptainer version 1.4.0-1.el9
[2025-04-15 23:22:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 23:22:14] c-5-2.aglt2.org
[2025-04-15 23:22:14] apptainer works
[2025-04-15 23:22:14] Set ATHENA_PROC_NUMBER=10
[2025-04-15 23:22:14] Set ATHENA_CORE_NUMBER=10
[2025-04-15 23:22:14] Starting ATLAS job with PandaID=6603697295
[2025-04-15 23:22:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 14:23:46]  *** The last 200 lines of the pilot log: ***
[2025-04-16 14:23:46] 2025-04-16 18:23:25,843 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 14:23:46] 2025-04-16 18:23:25,843 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 14:23:46] 2025-04-16 18:23:25,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 14:23:46] 2025-04-16 18:23:25,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 14:23:46] 2025-04-16 18:23:26,139 | INFO     | fitting pss+swap vs Time
[2025-04-16 14:23:46] 2025-04-16 18:23:26,140 | INFO     | sum of square deviations: 212743060869.9996
[2025-04-16 14:23:46] 2025-04-16 18:23:26,358 | INFO     | sum of deviations: 670746329942.6654
[2025-04-16 14:23:46] 2025-04-16 18:23:26,358 | INFO     | mean x: 1744800843.3333333
[2025-04-16 14:23:46] 2025-04-16 18:23:26,358 | INFO     | mean y: 2185354.490929705
[2025-04-16 14:23:46] 2025-04-16 18:23:26,358 | INFO     | -- intersect: -5498904821.427169
[2025-04-16 14:23:46] 2025-04-16 18:23:26,358 | INFO     | intersect: -5498904821.427169
[2025-04-16 14:23:46] 2025-04-16 18:23:26,411 | INFO     | chi2: 9.838725743157479
[2025-04-16 14:23:46] 2025-04-16 18:23:26,412 | INFO     | sum of square deviations: 209145387281.68277
[2025-04-16 14:23:46] 2025-04-16 18:23:26,562 | INFO     | sum of deviations: 860114741571.3219
[2025-04-16 14:23:46] 2025-04-16 18:23:26,562 | INFO     | mean x: 1744800690.836944
[2025-04-16 14:23:46] 2025-04-16 18:23:26,563 | INFO     | mean y: 2193371.582668187
[2025-04-16 14:23:46] 2025-04-16 18:23:26,563 | INFO     | -- intersect: -7173335645.805887
[2025-04-16 14:23:46] 2025-04-16 18:23:26,563 | INFO     | intersect: -7173335645.805887
[2025-04-16 14:23:46] 2025-04-16 18:23:26,564 | INFO     | chi2: 7.11394590540198
[2025-04-16 14:23:46] 2025-04-16 18:23:26,564 | INFO     | current chi2=7.11394590540198 (change=27.69443837430367 %)
[2025-04-16 14:23:46] 2025-04-16 18:23:26,566 | INFO     | sum of square deviations: 205588397919.20065
[2025-04-16 14:23:46] 2025-04-16 18:23:26,619 | INFO     | sum of deviations: 875781899968.7236
[2025-04-16 14:23:46] 2025-04-16 18:23:26,619 | INFO     | mean x: 1744800538.3383029
[2025-04-16 14:23:46] 2025-04-16 18:23:26,619 | INFO     | mean y: 2194043.9094036696
[2025-04-16 14:23:46] 2025-04-16 18:23:26,619 | INFO     | -- intersect: -7430446834.652834
[2025-04-16 14:23:46] 2025-04-16 18:23:26,619 | INFO     | intersect: -7430446834.652834
[2025-04-16 14:23:46] 2025-04-16 18:23:26,621 | INFO     | chi2: 7.070783609330843
[2025-04-16 14:23:46] 2025-04-16 18:23:26,621 | INFO     | current chi2=7.070783609330843 (change=0.6067279206939395 %)
[2025-04-16 14:23:46] 2025-04-16 18:23:26,621 | INFO     | right removable region: 871
[2025-04-16 14:23:46] 2025-04-16 18:23:26,622 | INFO     | sum of square deviations: 209144992489.00818
[2025-04-16 14:23:46] 2025-04-16 18:23:26,642 | INFO     | sum of deviations: 455506317484.59674
[2025-04-16 14:23:46] 2025-04-16 18:23:26,642 | INFO     | mean x: 1744800995.8380845
[2025-04-16 14:23:46] 2025-04-16 18:23:26,642 | INFO     | mean y: 2194471.6168757128
[2025-04-16 14:23:46] 2025-04-16 18:23:26,642 | INFO     | -- intersect: -3797886356.99504
[2025-04-16 14:23:46] 2025-04-16 18:23:26,642 | INFO     | intersect: -3797886356.99504
[2025-04-16 14:23:46] 2025-04-16 18:23:26,644 | INFO     | chi2: 7.0000498037078955
[2025-04-16 14:23:46] 2025-04-16 18:23:26,644 | INFO     | current chi2=7.0000498037078955 (change=28.85206899301764 %)
[2025-04-16 14:23:46] 2025-04-16 18:23:26,645 | INFO     | sum of square deviations: 205587822319.84296
[2025-04-16 14:23:46] 2025-04-16 18:23:26,669 | INFO     | sum of deviations: 305864920057.45123
[2025-04-16 14:23:46] 2025-04-16 18:23:26,686 | INFO     | mean x: 1744801148.3405964
[2025-04-16 14:23:46] 2025-04-16 18:23:26,686 | INFO     | mean y: 2200886.402522936
[2025-04-16 14:23:46] 2025-04-16 18:23:26,686 | INFO     | -- intersect: -2593640918.483585
[2025-04-16 14:23:46] 2025-04-16 18:23:26,686 | INFO     | intersect: -2593640918.483585
[2025-04-16 14:23:46] 2025-04-16 18:23:26,687 | INFO     | chi2: 5.7232817179916
[2025-04-16 14:23:46] 2025-04-16 18:23:26,688 | INFO     | current chi2=5.7232817179916 (change=18.239414311595294 %)
[2025-04-16 14:23:46] 2025-04-16 18:23:26,688 | INFO     | left removable region: 20
[2025-04-16 14:23:46] 2025-04-16 18:23:26,689 | INFO     | sum of square deviations: 191088387842.04724
[2025-04-16 14:23:46] 2025-04-16 18:23:26,823 | INFO     | sum of deviations: 284331150474.93506
[2025-04-16 14:23:46] 2025-04-16 18:23:26,823 | INFO     | mean x: 1744801117.8507638
[2025-04-16 14:23:46] 2025-04-16 18:23:26,823 | INFO     | mean y: 2220619.330199765
[2025-04-16 14:23:46] 2025-04-16 18:23:26,849 | INFO     | -- intersect: -2593967012.9530106
[2025-04-16 14:23:46] 2025-04-16 18:23:26,849 | INFO     | intersect: -2593967012.9530106
[2025-04-16 14:23:46] 2025-04-16 18:23:26,850 | INFO     | chi2: 1.339198936136213
[2025-04-16 14:23:46] 2025-04-16 18:23:26,851 | INFO     | -- intersect: -2593967012.9530106
[2025-04-16 14:23:46] 2025-04-16 18:23:26,851 | INFO     | current memory leak: 1.49 B/s (using 851 data points, chi2=1.34)
[2025-04-16 14:23:46] 2025-04-16 18:23:26,852 | INFO     | ..............................
[2025-04-16 14:23:46] 2025-04-16 18:23:26,852 | INFO     | . Timing measurements:
[2025-04-16 14:23:46] 2025-04-16 18:23:26,852 | INFO     | . get job = 1 s
[2025-04-16 14:23:46] 2025-04-16 18:23:26,904 | INFO     | . initial setup = 5 s
[2025-04-16 14:23:46] 2025-04-16 18:23:26,904 | INFO     | . payload setup = 48 s
[2025-04-16 14:23:46] 2025-04-16 18:23:26,904 | INFO     | . stage-in = 0 s
[2025-04-16 14:23:46] 2025-04-16 18:23:26,904 | INFO     | . payload execution = 53833 s
[2025-04-16 14:23:46] 2025-04-16 18:23:26,904 | INFO     | . stage-out = 4 s
[2025-04-16 14:23:46] 2025-04-16 18:23:26,904 | INFO     | . log creation = 0 s
[2025-04-16 14:23:46] 2025-04-16 18:23:26,904 | INFO     | ..............................
[2025-04-16 14:23:46] 2025-04-16 18:23:26,864 | INFO     | monitor loop #2908: job 0:6603697295 is in state 'finished'
[2025-04-16 14:23:46] 2025-04-16 18:23:26,952 | WARNING  | exception caught: deque index out of range
[2025-04-16 14:23:46] 2025-04-16 18:23:27,789 | INFO     | 
[2025-04-16 14:23:46] 2025-04-16 18:23:27,790 | INFO     | job summary report
[2025-04-16 14:23:46] 2025-04-16 18:23:27,790 | INFO     | --------------------------------------------------
[2025-04-16 14:23:46] 2025-04-16 18:23:27,790 | INFO     | PanDA job id: 6603697295
[2025-04-16 14:23:46] 2025-04-16 18:23:27,790 | INFO     | task id: 44075483
[2025-04-16 14:23:46] 2025-04-16 18:23:27,790 | INFO     | errors: (none)
[2025-04-16 14:23:46] 2025-04-16 18:23:27,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 14:23:46] 2025-04-16 18:23:27,790 | INFO     | pilot state: finished 
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | transexitcode: 0
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | exeerrorcode: 0
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | exeerrordiag: 
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | exitcode: 0
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | exitmsg: OK
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | cpuconsumptiontime: 49180 s
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | nevents: 400
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | neventsw: 0
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | pid: 2348350
[2025-04-16 14:23:46] 2025-04-16 18:23:27,791 | INFO     | pgrp: 2348350
[2025-04-16 14:23:46] 2025-04-16 18:23:27,792 | INFO     | corecount: 10
[2025-04-16 14:23:46] 2025-04-16 18:23:27,792 | INFO     | event service: False
[2025-04-16 14:23:46] 2025-04-16 18:23:27,792 | INFO     | sizes: {0: 2416536, 1: 2417221, 3: 2417420, 5: 2417420, 15: 2417476, 26: 2417504, 38: 2417660, 39: 2417894, 50: 2417922, 53887: 2465061, 53894: 2474002, 53898: 247
[2025-04-16 14:23:46] 2025-04-16 18:23:27,792 | INFO     | --------------------------------------------------
[2025-04-16 14:23:46] 2025-04-16 18:23:27,792 | INFO     | 
[2025-04-16 14:23:46] 2025-04-16 18:23:27,792 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-16 14:23:46] 2025-04-16 18:23:27,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 14:23:46] 2025-04-16 18:23:27,891 | INFO     | job 6603697295 has completed (purged errors)
[2025-04-16 14:23:46] 2025-04-16 18:23:27,892 | INFO     | overall cleanup function is called
[2025-04-16 14:23:46] 2025-04-16 18:23:28,901 | INFO     | --- collectZombieJob: --- 10, [2348350]
[2025-04-16 14:23:46] 2025-04-16 18:23:28,901 | INFO     | zombie collector waiting for pid 2348350
[2025-04-16 14:23:46] 2025-04-16 18:23:28,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 14:23:46] 2025-04-16 18:23:28,901 | INFO     | collected zombie processes
[2025-04-16 14:23:46] 2025-04-16 18:23:28,901 | INFO     | will attempt to kill all subprocesses of pid=2348350
[2025-04-16 14:23:46] 2025-04-16 18:23:29,893 | INFO     | process IDs to be killed: [2348350] (in reverse order)
[2025-04-16 14:23:46] 2025-04-16 18:23:30,028 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 14:23:46] 2025-04-16 18:23:30,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 14:23:46] 2025-04-16 18:23:30,075 | INFO     | did not find any defunct processes belonging to 2348350
[2025-04-16 14:23:46] 2025-04-16 18:23:30,125 | INFO     | did not find any defunct processes belonging to 2348350
[2025-04-16 14:23:46] 2025-04-16 18:23:30,125 | INFO     | ready for new job
[2025-04-16 14:23:46] 2025-04-16 18:23:30,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 14:23:46] 2025-04-16 18:23:30,139 | INFO     | **************************************
[2025-04-16 14:23:46] 2025-04-16 18:23:30,139 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 14:23:46] 2025-04-16 18:23:30,139 | INFO     | **************************************
[2025-04-16 14:23:46] 2025-04-16 18:23:30,139 | INFO     | 
[2025-04-16 14:23:46] 2025-04-16 18:23:30,166 | INFO     | architecture information:
[2025-04-16 14:23:46] 2025-04-16 18:23:30,172 | INFO     | executing command: cat /etc/os-release
[2025-04-16 14:23:46] 2025-04-16 18:23:30,370 | INFO     | cat /etc/os-release:
[2025-04-16 14:23:46] NAME="CentOS Linux"
[2025-04-16 14:23:46] VERSION="7 (Core)"
[2025-04-16 14:23:46] ID="centos"
[2025-04-16 14:23:46] ID_LIKE="rhel fedora"
[2025-04-16 14:23:46] VERSION_ID="7"
[2025-04-16 14:23:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 14:23:46] ANSI_COLOR="0;31"
[2025-04-16 14:23:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 14:23:46] HOME_URL="https://www.centos.org/"
[2025-04-16 14:23:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 14:23:46] 
[2025-04-16 14:23:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 14:23:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 14:23:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 14:23:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 14:23:46] 
[2025-04-16 14:23:46] 2025-04-16 18:23:30,370 | INFO     | **************************************
[2025-04-16 14:23:46] 2025-04-16 18:23:30,874 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-16 14:23:46] 2025-04-16 18:23:30,985 | INFO     | sufficient remaining disk space (76052168704 B)
[2025-04-16 14:23:46] 2025-04-16 18:23:30,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 14:23:46] 2025-04-16 18:23:30,986 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 14:23:46] 2025-04-16 18:23:30,986 | INFO     | update_server=False
[2025-04-16 14:23:46] 2025-04-16 18:23:30,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 14:23:46] 2025-04-16 18:23:30,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 14:23:46] 2025-04-16 18:23:30,987 | INFO     | aborting loop
[2025-04-16 14:23:46] 2025-04-16 18:23:30,991 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 14:23:46] 2025-04-16 18:23:30,991 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 14:23:46] 2025-04-16 18:23:30,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 14:23:46] 2025-04-16 18:23:30,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 14:23:46] 2025-04-16 18:23:31,073 | INFO     | all data control threads have been joined
[2025-04-16 14:23:46] 2025-04-16 18:23:31,376 | INFO     | all job control threads have been joined
[2025-04-16 14:23:46] 2025-04-16 18:23:31,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 14:23:46] 2025-04-16 18:23:31,992 | INFO     | [job] retrieve thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:31,993 | INFO     | [job] job monitor thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:32,079 | INFO     | [data] control thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:32,160 | INFO     | [job] validate thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:32,212 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:32,385 | INFO     | [job] control thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:32,471 | INFO     | all payload control threads have been joined
[2025-04-16 14:23:46] 2025-04-16 18:23:32,801 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:32,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 14:23:46] 2025-04-16 18:23:33,053 | INFO     | [payload] failed_post thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:33,237 | INFO     | [payload] validate_post thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:33,245 | INFO     | [data] copytool_in thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:33,368 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:33,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:33,477 | INFO     | [payload] control thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:33,820 | INFO     | [job] queue monitor thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:33,861 | INFO     | [data] copytool_out thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:34,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 14:23:46] 2025-04-16 18:23:38,383 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 14:23:46] 2025-04-16 18:23:40,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838356559680)>', '<ExcThread(monitor, started 139837843674880)>']
[2025-04-16 14:23:46] 2025-04-16 18:23:41,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 14:23:46] 2025-04-16 18:23:41,057 | INFO     | [monitor] control thread has ended
[2025-04-16 14:23:46] 2025-04-16 18:23:45,362 | INFO     | all workflow threads have been joined
[2025-04-16 14:23:46] 2025-04-16 18:23:45,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 14:23:46] 2025-04-16 18:23:45,362 | INFO     | traces error code: 0
[2025-04-16 14:23:46] 2025-04-16 18:23:45,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 14:23:46] 2025-04-16 18:23:45,938 [wrapper] ==== pilot stdout END ====
[2025-04-16 14:23:46] 2025-04-16 18:23:45,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 14:23:46] 2025-04-16 18:23:46,037 [wrapper] pilotpid: 2315068
[2025-04-16 14:23:46] 2025-04-16 18:23:46,076 [wrapper] Pilot exit status: 0
[2025-04-16 14:23:46] 2025-04-16 18:23:46,277 [wrapper] pandaids: 6603697295
[2025-04-16 14:23:46] 2025-04-16 18:23:46,553 [wrapper] cleanup supervisor_pilot 3930844 2315069
[2025-04-16 14:23:46] 2025-04-16 18:23:46,557 [wrapper] Test setup, not cleaning
[2025-04-16 14:23:46] 2025-04-16 18:23:46,560 [wrapper] apfmon messages muted
[2025-04-16 14:23:46] 2025-04-16 18:23:46,563 [wrapper] ==== wrapper stdout END ====
[2025-04-16 14:23:46] 2025-04-16 18:23:46,566 [wrapper] ==== wrapper stderr END ====
[2025-04-16 14:23:46]  *** Error codes and diagnostics ***
[2025-04-16 14:23:46]     "exeErrorCode": 0,
[2025-04-16 14:23:46]     "exeErrorDiag": "",
[2025-04-16 14:23:46]     "pilotErrorCode": 0,
[2025-04-16 14:23:46]     "pilotErrorDiag": "",
[2025-04-16 14:23:46]  *** Listing of results directory ***
[2025-04-16 14:23:46] total 413576
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas    495897 Apr 15 19:21 pilot3.tar.gz
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas      5111 Apr 15 19:32 queuedata.json
[2025-04-16 14:23:46] -rwx------. 1 boincer umatlas     37140 Apr 15 19:33 runpilot2-wrapper.sh
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas       100 Apr 15 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 14:23:46] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 15 23:22 run_atlas
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas       105 Apr 15 23:22 job.xml
[2025-04-16 14:23:46] -rw-r--r--. 2 boincer umatlas 221163810 Apr 15 23:22 EVNT.44075481._001309.pool.root.1
[2025-04-16 14:23:46] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 23:22 start_atlas.sh
[2025-04-16 14:23:46] drwxrwx--x. 2 boincer umatlas      4096 Apr 15 23:22 shared
[2025-04-16 14:23:46] -rw-r--r--. 2 boincer umatlas    508893 Apr 15 23:22 input.tar.gz
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas         0 Apr 15 23:22 boinc_lockfile
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas      2578 Apr 15 23:22 pandaJob.out
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas       467 Apr 15 23:22 setup.sh.local
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas    986044 Apr 15 23:23 agis_schedconf.cvmfs.json
[2025-04-16 14:23:46] drwx------. 4 boincer umatlas      4096 Apr 15 23:23 pilot3
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas 188985732 Apr 16 14:17 HITS.44075483._033369.pool.root.1
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas       531 Apr 16 14:17 boinc_task_state.xml
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas      6673 Apr 16 14:21 init_data.xml
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas        95 Apr 16 14:22 pilot_heartbeat.json
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas      1050 Apr 16 14:22 memory_monitor_summary.json
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas   1603529 Apr 16 14:22 agis_ddmendpoints.agis.ALL.json
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas    740346 Apr 16 14:22 log.44075483._033369.job.log.tgz.1
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas      7728 Apr 16 14:23 heartbeat.json
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 14:23 boinc_mmap_file
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas        28 Apr 16 14:23 wrapper_checkpoint.txt
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas      4476 Apr 16 14:23 pilotlog.txt
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas   4015886 Apr 16 14:23 log.44075483._033369.job.log.1
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas       357 Apr 16 14:23 output.list
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas       620 Apr 16 14:23 runtime_log
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas   4771840 Apr 16 14:23 result.tar.gz
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas     11406 Apr 16 14:23 runtime_log.err
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas       658 Apr 16 14:23 4RPLDmlx4O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJ7YLDmAFc9qm.diag
[2025-04-16 14:23:46] -rw-r--r--. 1 boincer umatlas     20947 Apr 16 14:23 stderr.txt
[2025-04-16 14:23:46] HITS file was successfully produced:
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas 188985732 Apr 16 14:17 shared/HITS.pool.root.1
[2025-04-16 14:23:46]  *** Contents of shared directory: ***
[2025-04-16 14:23:46] total 405728
[2025-04-16 14:23:46] -rw-r--r--. 2 boincer umatlas 221163810 Apr 15 23:22 ATLAS.root_0
[2025-04-16 14:23:46] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 23:22 start_atlas.sh
[2025-04-16 14:23:46] -rw-r--r--. 2 boincer umatlas    508893 Apr 15 23:22 input.tar.gz
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas 188985732 Apr 16 14:17 HITS.pool.root.1
[2025-04-16 14:23:46] -rw-------. 1 boincer umatlas   4771840 Apr 16 14:23 result.tar.gz
14:23:48 (2303614): run_atlas exited; CPU time 51856.320098
14:23:48 (2303614): called boinc_finish(0)

</stderr_txt>
]]>

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