Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:06:21 (5118): wrapper (7.7.26015): starting
23:06:21 (5118): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 23:06:21] Arguments: --nthreads 12
[2025-04-15 23:06:21] Threads: 12
[2025-04-15 23:06:21] Checking for CVMFS
[2025-04-15 23:06:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 23:06:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 23:06:22] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 23:06:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 23:06:22] 2.11.2.0 22679 366298 172448 144911 3 58 17620126 20275200 1 130560 0 19969957 99.963 6499766 53747 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 23:06:22] CVMFS is ok
[2025-04-15 23:06:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 23:06:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 23:06:22] Further information can be found at the LHC@home message board.
[2025-04-15 23:06:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 23:06:22] Checking for apptainer binary...
[2025-04-15 23:06:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 23:06:22] Running /usr/bin/apptainer --version
[2025-04-15 23:06:22] apptainer version 1.3.2-1.el7
[2025-04-15 23:06:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 23:06:23] c-205-11.aglt2.org
[2025-04-15 23:06:23] apptainer works
[2025-04-15 23:06:23] Set ATHENA_PROC_NUMBER=12
[2025-04-15 23:06:23] Set ATHENA_CORE_NUMBER=12
[2025-04-15 23:06:23] Starting ATLAS job with PandaID=6602123905
[2025-04-15 23:06:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 00:28:44]  *** The last 200 lines of the pilot log: ***
[2025-04-16 00:28:44]  guid=1d9a61ce-988d-4a9d-969e-11daf2977694
[2025-04-16 00:28:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-16 00:28:44]  is_altstaged=None
[2025-04-16 00:28:44]  is_tar=False
[2025-04-16 00:28:44]  lfn=log.44075483._014768.job.log.tgz.1
[2025-04-16 00:28:44]  mtime=0
[2025-04-16 00:28:44]  protocol_id=None
[2025-04-16 00:28:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 00:28:44]  replicas=None
[2025-04-16 00:28:44]  scope=mc23_13p6TeV
[2025-04-16 00:28:44]  status=None
[2025-04-16 00:28:44]  status_code=0
[2025-04-16 00:28:44]  storage_token=
[2025-04-16 00:28:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6602123905/log.44075483._014768.job.log.tgz.1
[2025-04-16 00:28:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/e2/log.44075483._014768.job.log.tgz.1
[2025-04-16 00:28:44]  workdir=None
[2025-04-16 00:28:44] ]
[2025-04-16 00:28:44] 2025-04-16 04:28:18,887 | INFO     | transferring file log.44075483._014768.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6602123905/log.44075483._014768.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-16 00:28:44] 2025-04-16 04:28:18,888 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6602123905/log.44075483._014768.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._014768.job
[2025-04-16 00:28:44] 2025-04-16 04:28:18,908 | INFO     | adding to output.list: log.44075483._014768.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/e2/log.44075483._014768.job.log.tg
[2025-04-16 00:28:44] 2025-04-16 04:28:18,909 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 00:28:44] 2025-04-16 04:28:18,909 | INFO     | summary of transferred files:
[2025-04-16 00:28:44] 2025-04-16 04:28:18,909 | INFO     |  -- lfn=log.44075483._014768.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 00:28:44] 2025-04-16 04:28:18,910 | INFO     | stage-out finished correctly
[2025-04-16 00:28:44] 2025-04-16 04:28:20,870 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 00:28:44] 2025-04-16 04:28:20,951 | INFO     | job 6602123905 has state=finished
[2025-04-16 00:28:44] 2025-04-16 04:28:20,951 | INFO     | preparing for final server update for job 6602123905 in state='finished'
[2025-04-16 00:28:44] 2025-04-16 04:28:20,952 | INFO     | this job has now completed (state=finished)
[2025-04-16 00:28:44] 2025-04-16 04:28:20,952 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 00:28:44] 2025-04-16 04:28:20,952 | INFO     | log transfer has been attempted: DONE
[2025-04-16 00:28:44] 2025-04-16 04:28:20,953 | INFO     | job 6602123905 has finished - writing final server update
[2025-04-16 00:28:44] 2025-04-16 04:28:20,953 | INFO     | total number of processed events: 400 (read)
[2025-04-16 00:28:44] 2025-04-16 04:28:20,955 | INFO     | executing command: lscpu
[2025-04-16 00:28:44] 2025-04-16 04:28:20,982 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 00:28:44] 2025-04-16 04:28:22,215 | WARNING  | process 15093 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 00:28:44] 2025-04-16 04:28:22,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6602123905/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 00:28:44] 2025-04-16 04:28:22,302 | INFO     | number of running child processes to parent process 15093: 1
[2025-04-16 00:28:44] 2025-04-16 04:28:22,302 | INFO     | maximum number of monitored processes: 6
[2025-04-16 00:28:44] 2025-04-16 04:28:24,806 | INFO     | monitor loop #367: job 0:6602123905 is in state 'finished'
[2025-04-16 00:28:44] 2025-04-16 04:28:24,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 00:28:44] 2025-04-16 04:28:25,690 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-16 00:28:44] 2025-04-16 04:28:25,691 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6602123905/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 00:28:44] 2025-04-16 04:28:25,692 | INFO     | extracted standard info from prmon json
[2025-04-16 00:28:44] 2025-04-16 04:28:25,692 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 00:28:44] 2025-04-16 04:28:25,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 00:28:44] 2025-04-16 04:28:25,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 00:28:44] 2025-04-16 04:28:25,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 00:28:44] 2025-04-16 04:28:25,696 | INFO     | fitting pss+swap vs Time
[2025-04-16 00:28:44] 2025-04-16 04:28:25,696 | INFO     | sum of square deviations: 120605052.0
[2025-04-16 00:28:44] 2025-04-16 04:28:25,697 | INFO     | sum of deviations: 25768018574.0
[2025-04-16 00:28:44] 2025-04-16 04:28:25,697 | INFO     | mean x: 1744775327.0
[2025-04-16 00:28:44] 2025-04-16 04:28:25,697 | INFO     | mean y: 2559955.164383562
[2025-04-16 00:28:44] 2025-04-16 04:28:25,697 | INFO     | -- intersect: -372779527428.64545
[2025-04-16 00:28:44] 2025-04-16 04:28:25,697 | INFO     | intersect: -372779527428.64545
[2025-04-16 00:28:44] 2025-04-16 04:28:25,697 | INFO     | chi2: 2.5667705338409768
[2025-04-16 00:28:44] 2025-04-16 04:28:25,698 | INFO     | -- intersect: -372779527428.64545
[2025-04-16 00:28:44] 2025-04-16 04:28:25,698 | INFO     | current memory leak: 213.66 B/s (using 73 data points, chi2=2.57)
[2025-04-16 00:28:44] 2025-04-16 04:28:25,698 | INFO     | ..............................
[2025-04-16 00:28:44] 2025-04-16 04:28:25,698 | INFO     | . Timing measurements:
[2025-04-16 00:28:44] 2025-04-16 04:28:25,698 | INFO     | . get job = 0 s
[2025-04-16 00:28:44] 2025-04-16 04:28:25,698 | INFO     | . initial setup = 3 s
[2025-04-16 00:28:44] 2025-04-16 04:28:25,699 | INFO     | . payload setup = 7 s
[2025-04-16 00:28:44] 2025-04-16 04:28:25,699 | INFO     | . stage-in = 0 s
[2025-04-16 00:28:44] 2025-04-16 04:28:25,699 | INFO     | . payload execution = 4873 s
[2025-04-16 00:28:44] 2025-04-16 04:28:25,699 | INFO     | . stage-out = 0 s
[2025-04-16 00:28:44] 2025-04-16 04:28:25,699 | INFO     | . log creation = 0 s
[2025-04-16 00:28:44] 2025-04-16 04:28:25,699 | INFO     | ..............................
[2025-04-16 00:28:44] 2025-04-16 04:28:26,153 | INFO     | 
[2025-04-16 00:28:44] 2025-04-16 04:28:26,154 | INFO     | job summary report
[2025-04-16 00:28:44] 2025-04-16 04:28:26,154 | INFO     | --------------------------------------------------
[2025-04-16 00:28:44] 2025-04-16 04:28:26,154 | INFO     | PanDA job id: 6602123905
[2025-04-16 00:28:44] 2025-04-16 04:28:26,154 | INFO     | task id: 44075483
[2025-04-16 00:28:44] 2025-04-16 04:28:26,154 | INFO     | errors: (none)
[2025-04-16 00:28:44] 2025-04-16 04:28:26,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 00:28:44] 2025-04-16 04:28:26,155 | INFO     | pilot state: finished 
[2025-04-16 00:28:44] 2025-04-16 04:28:26,155 | INFO     | transexitcode: 0
[2025-04-16 00:28:44] 2025-04-16 04:28:26,155 | INFO     | exeerrorcode: 0
[2025-04-16 00:28:44] 2025-04-16 04:28:26,155 | INFO     | exeerrordiag: 
[2025-04-16 00:28:44] 2025-04-16 04:28:26,155 | INFO     | exitcode: 0
[2025-04-16 00:28:44] 2025-04-16 04:28:26,155 | INFO     | exitmsg: OK
[2025-04-16 00:28:44] 2025-04-16 04:28:26,156 | INFO     | cpuconsumptiontime: 46695 s
[2025-04-16 00:28:44] 2025-04-16 04:28:26,156 | INFO     | nevents: 400
[2025-04-16 00:28:44] 2025-04-16 04:28:26,156 | INFO     | neventsw: 0
[2025-04-16 00:28:44] 2025-04-16 04:28:26,156 | INFO     | pid: 15093
[2025-04-16 00:28:44] 2025-04-16 04:28:26,156 | INFO     | pgrp: 15093
[2025-04-16 00:28:44] 2025-04-16 04:28:26,156 | INFO     | corecount: 12
[2025-04-16 00:28:44] 2025-04-16 04:28:26,157 | INFO     | event service: False
[2025-04-16 00:28:44] 2025-04-16 04:28:26,157 | INFO     | sizes: {0: 2417363, 5: 2417569, 11: 2417625, 4884: 2443717, 4886: 2452658, 4888: 2452714, 4893: 2453012}
[2025-04-16 00:28:44] 2025-04-16 04:28:26,157 | INFO     | --------------------------------------------------
[2025-04-16 00:28:44] 2025-04-16 04:28:26,157 | INFO     | 
[2025-04-16 00:28:44] 2025-04-16 04:28:26,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-16 00:28:44] 2025-04-16 04:28:26,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,183 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 00:28:44] 2025-04-16 04:28:26,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 00:28:44] 2025-04-16 04:28:26,184 | INFO     | job 6602123905 has completed (purged errors)
[2025-04-16 00:28:44] 2025-04-16 04:28:26,184 | INFO     | overall cleanup function is called
[2025-04-16 00:28:44] 2025-04-16 04:28:27,192 | INFO     | --- collectZombieJob: --- 10, [15093]
[2025-04-16 00:28:44] 2025-04-16 04:28:27,192 | INFO     | zombie collector waiting for pid 15093
[2025-04-16 00:28:44] 2025-04-16 04:28:27,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 00:28:44] 2025-04-16 04:28:27,193 | INFO     | collected zombie processes
[2025-04-16 00:28:44] 2025-04-16 04:28:27,193 | INFO     | will attempt to kill all subprocesses of pid=15093
[2025-04-16 00:28:44] 2025-04-16 04:28:27,282 | INFO     | process IDs to be killed: [15093] (in reverse order)
[2025-04-16 00:28:44] 2025-04-16 04:28:27,334 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 00:28:44] 2025-04-16 04:28:27,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 00:28:44] 2025-04-16 04:28:27,338 | INFO     | did not find any defunct processes belonging to 15093
[2025-04-16 00:28:44] 2025-04-16 04:28:27,340 | INFO     | did not find any defunct processes belonging to 15093
[2025-04-16 00:28:44] 2025-04-16 04:28:27,341 | INFO     | ready for new job
[2025-04-16 00:28:44] 2025-04-16 04:28:27,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 00:28:44] 2025-04-16 04:28:27,342 | INFO     | **************************************
[2025-04-16 00:28:44] 2025-04-16 04:28:27,343 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 00:28:44] 2025-04-16 04:28:27,343 | INFO     | **************************************
[2025-04-16 00:28:44] 2025-04-16 04:28:27,343 | INFO     | 
[2025-04-16 00:28:44] 2025-04-16 04:28:27,343 | INFO     | architecture information:
[2025-04-16 00:28:44] 2025-04-16 04:28:27,344 | INFO     | executing command: cat /etc/os-release
[2025-04-16 00:28:44] 2025-04-16 04:28:27,359 | INFO     | cat /etc/os-release:
[2025-04-16 00:28:44] NAME="CentOS Linux"
[2025-04-16 00:28:44] VERSION="7 (Core)"
[2025-04-16 00:28:44] ID="centos"
[2025-04-16 00:28:44] ID_LIKE="rhel fedora"
[2025-04-16 00:28:44] VERSION_ID="7"
[2025-04-16 00:28:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 00:28:44] ANSI_COLOR="0;31"
[2025-04-16 00:28:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 00:28:44] HOME_URL="https://www.centos.org/"
[2025-04-16 00:28:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 00:28:44] 
[2025-04-16 00:28:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 00:28:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 00:28:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 00:28:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 00:28:44] 
[2025-04-16 00:28:44] 2025-04-16 04:28:27,360 | INFO     | **************************************
[2025-04-16 00:28:44] 2025-04-16 04:28:27,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-16 00:28:44] 2025-04-16 04:28:27,880 | INFO     | sufficient remaining disk space (29392633856 B)
[2025-04-16 00:28:44] 2025-04-16 04:28:27,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 00:28:44] 2025-04-16 04:28:27,881 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 00:28:44] 2025-04-16 04:28:27,881 | INFO     | update_server=False
[2025-04-16 00:28:44] 2025-04-16 04:28:27,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 00:28:44] 2025-04-16 04:28:27,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 00:28:44] 2025-04-16 04:28:27,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 00:28:44] 2025-04-16 04:28:28,019 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 00:28:44] 2025-04-16 04:28:28,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 00:28:44] 2025-04-16 04:28:28,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 00:28:44] 2025-04-16 04:28:28,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 00:28:44] 2025-04-16 04:28:28,314 | INFO     | aborting loop
[2025-04-16 00:28:44] 2025-04-16 04:28:28,390 | INFO     | all data control threads have been joined
[2025-04-16 00:28:44] 2025-04-16 04:28:28,827 | INFO     | all payload control threads have been joined
[2025-04-16 00:28:44] 2025-04-16 04:28:28,887 | INFO     | [job] retrieve thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,152 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,270 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,320 | INFO     | [job] job monitor thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,385 | INFO     | all job control threads have been joined
[2025-04-16 00:28:44] 2025-04-16 04:28:29,395 | INFO     | [data] control thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,594 | INFO     | [payload] validate_post thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,761 | INFO     | [data] copytool_in thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,832 | INFO     | [payload] control thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:29,888 | INFO     | [data] copytool_out thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:30,004 | INFO     | [payload] failed_post thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:30,293 | INFO     | [job] validate thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:30,311 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:30,391 | INFO     | [job] control thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:30,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 00:28:44] 2025-04-16 04:28:31,798 | INFO     | [job] queue monitor thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:31,888 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:38,051 | INFO     | job.realtimelogging is not enabled
[2025-04-16 00:28:44] 2025-04-16 04:28:39,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 00:28:44] 2025-04-16 04:28:39,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291061516096)>', '<ExcThread(monitor, started 140290358744832)>']
[2025-04-16 00:28:44] 2025-04-16 04:28:40,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 00:28:44] 2025-04-16 04:28:40,070 | INFO     | [monitor] control thread has ended
[2025-04-16 00:28:44] 2025-04-16 04:28:44,581 | INFO     | all workflow threads have been joined
[2025-04-16 00:28:44] 2025-04-16 04:28:44,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 00:28:44] 2025-04-16 04:28:44,581 | INFO     | traces error code: 0
[2025-04-16 00:28:44] 2025-04-16 04:28:44,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 00:28:44] 2025-04-16 04:28:44,679 [wrapper] ==== pilot stdout END ====
[2025-04-16 00:28:44] 2025-04-16 04:28:44,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 00:28:44] 2025-04-16 04:28:44,686 [wrapper] pilotpid: 8723
[2025-04-16 00:28:44] 2025-04-16 04:28:44,690 [wrapper] Pilot exit status: 0
[2025-04-16 00:28:44] 2025-04-16 04:28:44,706 [wrapper] pandaids: 6602123905
[2025-04-16 00:28:44] 2025-04-16 04:28:44,744 [wrapper] cleanup supervisor_pilot 11748 8724
[2025-04-16 00:28:44] 2025-04-16 04:28:44,748 [wrapper] Test setup, not cleaning
[2025-04-16 00:28:44] 2025-04-16 04:28:44,752 [wrapper] apfmon messages muted
[2025-04-16 00:28:44] 2025-04-16 04:28:44,756 [wrapper] ==== wrapper stdout END ====
[2025-04-16 00:28:44] 2025-04-16 04:28:44,760 [wrapper] ==== wrapper stderr END ====
[2025-04-16 00:28:44]  *** Error codes and diagnostics ***
[2025-04-16 00:28:44]     "exeErrorCode": 0,
[2025-04-16 00:28:44]     "exeErrorDiag": "",
[2025-04-16 00:28:44]     "pilotErrorCode": 0,
[2025-04-16 00:28:44]     "pilotErrorDiag": "",
[2025-04-16 00:28:44]  *** Listing of results directory ***
[2025-04-16 00:28:44] total 418612
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 04:33 pilot3.tar.gz
[2025-04-16 00:28:44] -rwx------ 1 boincer umatlas     37140 Apr 14 04:34 runpilot2-wrapper.sh
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 04:34 queuedata.json
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas       100 Apr 15 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 00:28:44] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 23:06 run_atlas
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas       105 Apr 15 23:06 job.xml
[2025-04-16 00:28:44] -rw-r--r-- 2 boincer umatlas 225703075 Apr 15 23:06 EVNT.44075481._000583.pool.root.1
[2025-04-16 00:28:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 23:06 start_atlas.sh
[2025-04-16 00:28:44] drwxrwx--x 2 boincer umatlas      4096 Apr 15 23:06 shared
[2025-04-16 00:28:44] -rw-r--r-- 2 boincer umatlas    508891 Apr 15 23:06 input.tar.gz
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas         0 Apr 15 23:06 boinc_lockfile
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas      2577 Apr 15 23:06 pandaJob.out
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas       424 Apr 15 23:06 setup.sh.local
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas    986044 Apr 15 23:06 agis_schedconf.cvmfs.json
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas   1603529 Apr 15 23:06 agis_ddmendpoints.agis.ALL.json
[2025-04-16 00:28:44] drwx------ 4 boincer umatlas      4096 Apr 15 23:06 pilot3
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas        95 Apr 16 00:27 pilot_heartbeat.json
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas      5868 Apr 16 00:27 init_data.xml
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas       530 Apr 16 00:27 boinc_task_state.xml
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas 197466328 Apr 16 00:27 HITS.44075483._014768.pool.root.1
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas      1049 Apr 16 00:28 memory_monitor_summary.json
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas    357230 Apr 16 00:28 log.44075483._014768.job.log.tgz.1
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas      7749 Apr 16 00:28 heartbeat.json
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 00:28 boinc_mmap_file
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas        27 Apr 16 00:28 wrapper_checkpoint.txt
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas      4425 Apr 16 00:28 pilotlog.txt
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas    466468 Apr 16 00:28 log.44075483._014768.job.log.1
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas       357 Apr 16 00:28 output.list
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas       620 Apr 16 00:28 runtime_log
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas    839680 Apr 16 00:28 result.tar.gz
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas     11015 Apr 16 00:28 runtime_log.err
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas       658 Apr 16 00:28 PGWKDmyRUO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWrVLDmw1KHcn.diag
[2025-04-16 00:28:44] -rw-r--r-- 1 boincer umatlas     21254 Apr 16 00:28 stderr.txt
[2025-04-16 00:28:44] HITS file was successfully produced:
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas 197466328 Apr 16 00:27 shared/HITS.pool.root.1
[2025-04-16 00:28:44]  *** Contents of shared directory: ***
[2025-04-16 00:28:44] total 414604
[2025-04-16 00:28:44] -rw-r--r-- 2 boincer umatlas 225703075 Apr 15 23:06 ATLAS.root_0
[2025-04-16 00:28:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 23:06 start_atlas.sh
[2025-04-16 00:28:44] -rw-r--r-- 2 boincer umatlas    508891 Apr 15 23:06 input.tar.gz
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas 197466328 Apr 16 00:27 HITS.pool.root.1
[2025-04-16 00:28:44] -rw------- 1 boincer umatlas    839680 Apr 16 00:28 result.tar.gz
00:28:46 (5118): run_atlas exited; CPU time 46671.013320
00:28:46 (5118): called boinc_finish(0)

</stderr_txt>
]]>

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