Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:00:48 (543943): wrapper (7.7.26015): starting
16:00:48 (543943): wrapper: running run_atlas (--nthreads 6)
[2025-04-16 16:00:48] Arguments: --nthreads 6
[2025-04-16 16:00:48] Threads: 6
[2025-04-16 16:00:48] Checking for CVMFS
[2025-04-16 16:01:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 16:01:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 16:01:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 16:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 16:01:43] 2.11.5.0 544176 0 28840 144917 3 1 10961168 20971521 0 130560 0 0 0.000 1172 35 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-16 16:01:43] CVMFS is ok
[2025-04-16 16:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 16:01:43] Checking for apptainer binary...
[2025-04-16 16:01:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 16:01:43] Running /usr/bin/apptainer --version
[2025-04-16 16:01:43] apptainer version 1.3.6-1.el9
[2025-04-16 16:01:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 16:01:43] testio006
[2025-04-16 16:01:43] apptainer works
[2025-04-16 16:01:43] Set ATHENA_PROC_NUMBER=6
[2025-04-16 16:01:43] Set ATHENA_CORE_NUMBER=6
[2025-04-16 16:01:43] Starting ATLAS job with PandaID=6602132585
[2025-04-16 16:01:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 17:38:18]  *** The last 200 lines of the pilot log: ***
[2025-04-16 17:38:18]  replicas=None
[2025-04-16 17:38:18]  scope=mc23_13p6TeV
[2025-04-16 17:38:18]  status=None
[2025-04-16 17:38:18]  status_code=0
[2025-04-16 17:38:18]  storage_token=
[2025-04-16 17:38:18]  surl=/var/lib/boinc/slots/8/PanDA_Pilot-6602132585/log.44075483._018721.job.log.tgz.1
[2025-04-16 17:38:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/98/log.44075483._018721.job.log.tgz.1
[2025-04-16 17:38:18]  workdir=None
[2025-04-16 17:38:18] ]
[2025-04-16 17:38:18] 2025-04-16 08:37:54,763 | INFO     | transferring file log.44075483._018721.job.log.tgz.1 from /var/lib/boinc/slots/8/PanDA_Pilot-6602132585/log.44075483._018721.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-16 17:38:18] 2025-04-16 08:37:54,763 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/8/PanDA_Pilot-6602132585/log.44075483._018721.job.log.tgz.1 /var/lib/boinc/slots/8/log.44075483._018721.job
[2025-04-16 17:38:18] 2025-04-16 08:37:54,777 | INFO     | adding to output.list: log.44075483._018721.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/98/log.44075483._018721.job.log.tg
[2025-04-16 17:38:18] 2025-04-16 08:37:54,778 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 17:38:18] 2025-04-16 08:37:54,778 | INFO     | summary of transferred files:
[2025-04-16 17:38:18] 2025-04-16 08:37:54,778 | INFO     |  -- lfn=log.44075483._018721.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 17:38:18] 2025-04-16 08:37:54,779 | INFO     | stage-out finished correctly
[2025-04-16 17:38:18] 2025-04-16 08:37:55,806 | INFO     | monitor loop #413: job 0:6602132585 is in state 'finished'
[2025-04-16 17:38:18] 2025-04-16 08:37:55,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 17:38:18] 2025-04-16 08:37:57,026 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 17:38:18] 2025-04-16 08:37:58,309 | INFO     | monitor loop #414: job 0:6602132585 is in state 'finished'
[2025-04-16 17:38:18] 2025-04-16 08:37:58,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 17:38:18] 2025-04-16 08:37:59,504 | INFO     | job 6602132585 has state=finished
[2025-04-16 17:38:18] 2025-04-16 08:37:59,505 | INFO     | preparing for final server update for job 6602132585 in state='finished'
[2025-04-16 17:38:18] 2025-04-16 08:38:00,505 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-16 17:38:18] 2025-04-16 08:38:00,505 | INFO     | this job has now completed (state=finished)
[2025-04-16 17:38:18] 2025-04-16 08:38:00,505 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 17:38:18] 2025-04-16 08:38:00,505 | INFO     | log transfer has been attempted: DONE
[2025-04-16 17:38:18] 2025-04-16 08:38:00,506 | INFO     | job 6602132585 has finished - writing final server update
[2025-04-16 17:38:18] 2025-04-16 08:38:00,506 | INFO     | total number of processed events: 400 (read)
[2025-04-16 17:38:18] 2025-04-16 08:38:00,509 | INFO     | executing command: lscpu
[2025-04-16 17:38:18] 2025-04-16 08:38:00,531 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 17:38:18] 2025-04-16 08:38:00,812 | INFO     | monitor loop #415: job 0:6602132585 is in state 'finished'
[2025-04-16 17:38:18] 2025-04-16 08:38:00,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 17:38:18] 2025-04-16 08:38:03,315 | INFO     | monitor loop #416: job 0:6602132585 is in state 'finished'
[2025-04-16 17:38:18] 2025-04-16 08:38:03,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 17:38:18] 2025-04-16 08:38:04,831 | INFO     | PID=548354 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-16 17:38:18] 2025-04-16 08:38:04,831 | INFO     | .. there are 2 such processes running
[2025-04-16 17:38:18] 2025-04-16 08:38:05,818 | INFO     | monitor loop #417: job 0:6602132585 is in state 'finished'
[2025-04-16 17:38:18] 2025-04-16 08:38:05,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 17:38:18] 2025-04-16 08:38:06,413 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-16 17:38:18] 2025-04-16 08:38:06,413 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6602132585/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 17:38:18] 2025-04-16 08:38:06,413 | INFO     | extracted standard info from prmon json
[2025-04-16 17:38:18] 2025-04-16 08:38:06,413 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 17:38:18] 2025-04-16 08:38:06,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 17:38:18] 2025-04-16 08:38:06,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 17:38:18] 2025-04-16 08:38:06,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 17:38:18] 2025-04-16 08:38:06,415 | INFO     | fitting pss+swap vs Time
[2025-04-16 17:38:18] 2025-04-16 08:38:06,416 | INFO     | sum of square deviations: 197203697.5
[2025-04-16 17:38:18] 2025-04-16 08:38:06,416 | INFO     | sum of deviations: 20661100282.0
[2025-04-16 17:38:18] 2025-04-16 08:38:06,416 | INFO     | mean x: 1744789924.5
[2025-04-16 17:38:18] 2025-04-16 08:38:06,416 | INFO     | mean y: 2341580.3720930233
[2025-04-16 17:38:18] 2025-04-16 08:38:06,416 | INFO     | -- intersect: -182799908367.89627
[2025-04-16 17:38:18] 2025-04-16 08:38:06,416 | INFO     | intersect: -182799908367.89627
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | chi2: 1.3655308865461135
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | -- intersect: -182799908367.89627
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | current memory leak: 104.77 B/s (using 86 data points, chi2=1.37)
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | ..............................
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | . Timing measurements:
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | . get job = 0 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | . initial setup = 4 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | . payload setup = 4 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,417 | INFO     | . stage-in = 0 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,418 | INFO     | . payload execution = 5645 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,418 | INFO     | . stage-out = 0 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,418 | INFO     | . log creation = 0 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,418 | INFO     | ..............................
[2025-04-16 17:38:18] 2025-04-16 08:38:06,495 | INFO     | 
[2025-04-16 17:38:18] 2025-04-16 08:38:06,495 | INFO     | job summary report
[2025-04-16 17:38:18] 2025-04-16 08:38:06,495 | INFO     | --------------------------------------------------
[2025-04-16 17:38:18] 2025-04-16 08:38:06,495 | INFO     | PanDA job id: 6602132585
[2025-04-16 17:38:18] 2025-04-16 08:38:06,495 | INFO     | task id: 44075483
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | errors: (none)
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | pilot state: finished 
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | transexitcode: 0
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | exeerrorcode: 0
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | exeerrordiag: 
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | exitcode: 0
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | exitmsg: OK
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | cpuconsumptiontime: 28124 s
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | nevents: 400
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | neventsw: 0
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | pid: 554928
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | pgrp: 554928
[2025-04-16 17:38:18] 2025-04-16 08:38:06,496 | INFO     | corecount: 6
[2025-04-16 17:38:18] 2025-04-16 08:38:06,497 | INFO     | event service: False
[2025-04-16 17:38:18] 2025-04-16 08:38:06,497 | INFO     | sizes: {0: 2417313, 3: 2417519, 11: 2417547, 5653: 2444080, 5654: 2444079, 5655: 2453076, 5657: 2453260, 5666: 2453430}
[2025-04-16 17:38:18] 2025-04-16 08:38:06,497 | INFO     | --------------------------------------------------
[2025-04-16 17:38:18] 2025-04-16 08:38:06,497 | INFO     | 
[2025-04-16 17:38:18] 2025-04-16 08:38:06,497 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-04-16 17:38:18] 2025-04-16 08:38:06,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 17:38:18] 2025-04-16 08:38:06,517 | INFO     | job 6602132585 has completed (purged errors)
[2025-04-16 17:38:18] 2025-04-16 08:38:06,517 | INFO     | overall cleanup function is called
[2025-04-16 17:38:18] 2025-04-16 08:38:07,524 | INFO     | --- collectZombieJob: --- 10, [554928]
[2025-04-16 17:38:18] 2025-04-16 08:38:07,524 | INFO     | zombie collector waiting for pid 554928
[2025-04-16 17:38:18] 2025-04-16 08:38:07,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 17:38:18] 2025-04-16 08:38:07,524 | INFO     | collected zombie processes
[2025-04-16 17:38:18] 2025-04-16 08:38:07,524 | INFO     | will attempt to kill all subprocesses of pid=554928
[2025-04-16 17:38:18] 2025-04-16 08:38:07,629 | INFO     | process IDs to be killed: [554928] (in reverse order)
[2025-04-16 17:38:18] 2025-04-16 08:38:07,668 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 17:38:18] 2025-04-16 08:38:07,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 17:38:18] 2025-04-16 08:38:07,672 | INFO     | did not find any defunct processes belonging to 554928
[2025-04-16 17:38:18] 2025-04-16 08:38:07,676 | INFO     | did not find any defunct processes belonging to 554928
[2025-04-16 17:38:18] 2025-04-16 08:38:07,676 | INFO     | ready for new job
[2025-04-16 17:38:18] 2025-04-16 08:38:07,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 17:38:18] 2025-04-16 08:38:07,678 | INFO     | **************************************
[2025-04-16 17:38:18] 2025-04-16 08:38:07,678 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 17:38:18] 2025-04-16 08:38:07,678 | INFO     | **************************************
[2025-04-16 17:38:18] 2025-04-16 08:38:07,678 | INFO     | 
[2025-04-16 17:38:18] 2025-04-16 08:38:07,679 | INFO     | architecture information:
[2025-04-16 17:38:18] 2025-04-16 08:38:07,679 | INFO     | executing command: cat /etc/os-release
[2025-04-16 17:38:18] 2025-04-16 08:38:07,692 | INFO     | cat /etc/os-release:
[2025-04-16 17:38:18] NAME="CentOS Linux"
[2025-04-16 17:38:18] VERSION="7 (Core)"
[2025-04-16 17:38:18] ID="centos"
[2025-04-16 17:38:18] ID_LIKE="rhel fedora"
[2025-04-16 17:38:18] VERSION_ID="7"
[2025-04-16 17:38:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 17:38:18] ANSI_COLOR="0;31"
[2025-04-16 17:38:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 17:38:18] HOME_URL="https://www.centos.org/"
[2025-04-16 17:38:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 17:38:18] 
[2025-04-16 17:38:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 17:38:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 17:38:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 17:38:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 17:38:18] 
[2025-04-16 17:38:18] 2025-04-16 08:38:07,692 | INFO     | **************************************
[2025-04-16 17:38:18] 2025-04-16 08:38:08,194 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-04-16 17:38:18] 2025-04-16 08:38:08,207 | INFO     | sufficient remaining disk space (87001399296 B)
[2025-04-16 17:38:18] 2025-04-16 08:38:08,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 17:38:18] 2025-04-16 08:38:08,207 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 17:38:18] 2025-04-16 08:38:08,208 | INFO     | update_server=False
[2025-04-16 17:38:18] 2025-04-16 08:38:08,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 17:38:18] 2025-04-16 08:38:08,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 17:38:18] 2025-04-16 08:38:08,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 17:38:18] 2025-04-16 08:38:08,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 17:38:18] 2025-04-16 08:38:08,321 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 17:38:18] 2025-04-16 08:38:08,321 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 17:38:18] 2025-04-16 08:38:08,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 17:38:18] 2025-04-16 08:38:08,321 | INFO     | will abort loop
[2025-04-16 17:38:18] 2025-04-16 08:38:08,590 | INFO     | all job control threads have been joined
[2025-04-16 17:38:18] 2025-04-16 08:38:08,703 | INFO     | all payload control threads have been joined
[2025-04-16 17:38:18] 2025-04-16 08:38:08,842 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 17:38:18] 2025-04-16 08:38:08,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 17:38:18] 2025-04-16 08:38:08,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 17:38:18] 2025-04-16 08:38:08,943 | INFO     | all data control threads have been joined
[2025-04-16 17:38:18] 2025-04-16 08:38:09,210 | INFO     | [job] retrieve thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,213 | INFO     | [job] queue monitor thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,327 | INFO     | [job] job monitor thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,455 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,498 | INFO     | [payload] validate_post thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,596 | INFO     | [job] control thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,702 | INFO     | [job] validate thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,708 | INFO     | [payload] control thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,881 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:09,948 | INFO     | [data] control thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:10,040 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:10,196 | INFO     | [data] copytool_in thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:10,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:10,214 | INFO     | [data] copytool_out thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:10,592 | INFO     | [payload] failed_post thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:12,213 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 17:38:18] 2025-04-16 08:38:13,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899118163776)>', '<ExcThread(monitor, started 139898493335296)>']
[2025-04-16 17:38:18] 2025-04-16 08:38:13,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 17:38:18] 2025-04-16 08:38:13,866 | INFO     | [monitor] control thread has ended
[2025-04-16 17:38:18] 2025-04-16 08:38:18,675 | INFO     | all workflow threads have been joined
[2025-04-16 17:38:18] 2025-04-16 08:38:18,675 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 17:38:18] 2025-04-16 08:38:18,675 | INFO     | traces error code: 0
[2025-04-16 17:38:18] 2025-04-16 08:38:18,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 17:38:18] 2025-04-16 08:38:18,793 [wrapper] ==== pilot stdout END ====
[2025-04-16 17:38:18] 2025-04-16 08:38:18,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 17:38:18] 2025-04-16 08:38:18,798 [wrapper] pilotpid: 548354
[2025-04-16 17:38:18] 2025-04-16 08:38:18,801 [wrapper] Pilot exit status: 0
[2025-04-16 17:38:18] 2025-04-16 08:38:18,809 [wrapper] pandaids: 6602132585
[2025-04-16 17:38:18] 2025-04-16 08:38:18,838 [wrapper] cleanup supervisor_pilot  588613 548355
[2025-04-16 17:38:18] 2025-04-16 08:38:18,841 [wrapper] Test setup, not cleaning
[2025-04-16 17:38:18] 2025-04-16 08:38:18,843 [wrapper] apfmon messages muted
[2025-04-16 17:38:18] 2025-04-16 08:38:18,845 [wrapper] ==== wrapper stdout END ====
[2025-04-16 17:38:18] 2025-04-16 08:38:18,848 [wrapper] ==== wrapper stderr END ====
[2025-04-16 17:38:18]  *** Error codes and diagnostics ***
[2025-04-16 17:38:18]     "exeErrorCode": 0,
[2025-04-16 17:38:18]     "exeErrorDiag": "",
[2025-04-16 17:38:18]     "pilotErrorCode": 0,
[2025-04-16 17:38:18]     "pilotErrorDiag": "",
[2025-04-16 17:38:18]  *** Listing of results directory ***
[2025-04-16 17:38:18] total 407552
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc    495897 Apr 15 00:38 pilot3.tar.gz
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc      5111 Apr 15 01:32 queuedata.json
[2025-04-16 17:38:18] -rwx------. 1 boinc boinc     37140 Apr 15 01:32 runpilot2-wrapper.sh
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc       100 Apr 16 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 17:38:18] -rwxr-xr-x. 1 boinc boinc      7986 Apr 16 16:00 run_atlas
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc       105 Apr 16 16:00 job.xml
[2025-04-16 17:38:18] -rw-r--r--. 2 boinc boinc 222734155 Apr 16 16:00 EVNT.44075481._000741.pool.root.1
[2025-04-16 17:38:18] -rw-r--r--. 2 boinc boinc     17569 Apr 16 16:00 start_atlas.sh
[2025-04-16 17:38:18] drwxrwx--x. 2 boinc boinc        68 Apr 16 16:00 shared
[2025-04-16 17:38:18] -rw-r--r--. 2 boinc boinc    508900 Apr 16 16:00 input.tar.gz
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc         0 Apr 16 16:00 boinc_lockfile
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc      2577 Apr 16 16:01 pandaJob.out
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc       424 Apr 16 16:01 setup.sh.local
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc    986044 Apr 16 16:03 agis_schedconf.cvmfs.json
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc   1603529 Apr 16 16:03 agis_ddmendpoints.agis.ALL.json
[2025-04-16 17:38:18] drwx------. 4 boinc boinc      4096 Apr 16 16:03 pilot3
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc      9468 Apr 16 16:07 init_data.xml
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc        95 Apr 16 17:37 pilot_heartbeat.json
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc 189126593 Apr 16 17:37 HITS.44075483._018721.pool.root.1
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc       529 Apr 16 17:37 boinc_task_state.xml
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc      1015 Apr 16 17:37 memory_monitor_summary.json
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc    274810 Apr 16 17:37 log.44075483._018721.job.log.tgz.1
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc      7668 Apr 16 17:38 heartbeat.json
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc        27 Apr 16 17:38 wrapper_checkpoint.txt
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc      8192 Apr 16 17:38 boinc_mmap_file
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc      4539 Apr 16 17:38 pilotlog.txt
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc    541555 Apr 16 17:38 log.44075483._018721.job.log.1
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc       357 Apr 16 17:38 output.list
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc       620 Apr 16 17:38 runtime_log
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc    839680 Apr 16 17:38 result.tar.gz
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc     10971 Apr 16 17:38 runtime_log.err
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc       644 Apr 16 17:38 8RYNDmkubO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLW0KDmGBtVXn.diag
[2025-04-16 17:38:18] -rw-r--r--. 1 boinc boinc     21539 Apr 16 17:38 stderr.txt
[2025-04-16 17:38:18] HITS file was successfully produced:
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc 189126593 Apr 16 17:37 shared/HITS.pool.root.1
[2025-04-16 17:38:18]  *** Contents of shared directory: ***
[2025-04-16 17:38:18] total 403552
[2025-04-16 17:38:18] -rw-r--r--. 2 boinc boinc 222734155 Apr 16 16:00 ATLAS.root_0
[2025-04-16 17:38:18] -rw-r--r--. 2 boinc boinc     17569 Apr 16 16:00 start_atlas.sh
[2025-04-16 17:38:18] -rw-r--r--. 2 boinc boinc    508900 Apr 16 16:00 input.tar.gz
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc 189126593 Apr 16 17:37 HITS.pool.root.1
[2025-04-16 17:38:18] -rw-------. 1 boinc boinc    839680 Apr 16 17:38 result.tar.gz
17:38:20 (543943): run_atlas exited; CPU time 28171.685866
17:38:20 (543943): called boinc_finish(0)

</stderr_txt>
]]>

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