Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:51:42 (1798770): wrapper (7.7.26015): starting
21:51:42 (1798770): wrapper: running run_atlas (--nthreads 8)
[2025-04-15 21:51:42] Arguments: --nthreads 8
[2025-04-15 21:51:42] Threads: 8
[2025-04-15 21:51:42] Checking for CVMFS
[2025-04-15 21:51:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 21:51:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 21:51:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 21:51:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 21:51:45] 2.12.6.0 2301809 67666 154508 144909 0 363 28793952 32935937 25095 130560 0 42830312 99.686 37338822 8372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-15 21:51:45] CVMFS is ok
[2025-04-15 21:51:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 21:51:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 21:51:45] Further information can be found at the LHC@home message board.
[2025-04-15 21:51:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 21:51:45] Checking for apptainer binary...
[2025-04-15 21:51:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 21:51:45] Running /usr/bin/apptainer --version
[2025-04-15 21:51:45] apptainer version 1.4.0-1.el9
[2025-04-15 21:51:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 21:51:46] c6-12-25-2.aglt2.org
[2025-04-15 21:51:46] apptainer works
[2025-04-15 21:51:46] Set ATHENA_PROC_NUMBER=8
[2025-04-15 21:51:46] Set ATHENA_CORE_NUMBER=8
[2025-04-15 21:51:46] Starting ATLAS job with PandaID=6603695570
[2025-04-15 21:51:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 06:24:49]  *** The last 200 lines of the pilot log: ***
[2025-04-16 06:24:49] 2025-04-16 10:23:58,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 06:24:49] 2025-04-16 10:24:00,859 | INFO     | monitor loop #1353: job 0:6603695570 is in state 'finished'
[2025-04-16 06:24:49] 2025-04-16 10:24:00,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 06:24:49] 2025-04-16 10:24:02,075 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-16 06:24:49] 2025-04-16 10:24:02,076 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6603695570/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 06:24:49] 2025-04-16 10:24:02,077 | INFO     | extracted standard info from prmon json
[2025-04-16 06:24:49] 2025-04-16 10:24:02,089 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 06:24:49] 2025-04-16 10:24:02,089 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 06:24:49] 2025-04-16 10:24:02,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 06:24:49] 2025-04-16 10:24:02,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 06:24:49] 2025-04-16 10:24:02,250 | INFO     | fitting pss+swap vs Time
[2025-04-16 06:24:49] 2025-04-16 10:24:02,270 | INFO     | sum of square deviations: 38762257984.04795
[2025-04-16 06:24:49] 2025-04-16 10:24:02,365 | INFO     | sum of deviations: 278212143419.44006
[2025-04-16 06:24:49] 2025-04-16 10:24:02,366 | INFO     | mean x: 1744783722.352
[2025-04-16 06:24:49] 2025-04-16 10:24:02,366 | INFO     | mean y: 2183551.81
[2025-04-16 06:24:49] 2025-04-16 10:24:02,367 | INFO     | -- intersect: -12520823219.329771
[2025-04-16 06:24:49] 2025-04-16 10:24:02,367 | INFO     | intersect: -12520823219.329771
[2025-04-16 06:24:49] 2025-04-16 10:24:02,369 | INFO     | chi2: 6.521906730102214
[2025-04-16 06:24:49] 2025-04-16 10:24:02,391 | INFO     | sum of square deviations: 37611227679.93134
[2025-04-16 06:24:49] 2025-04-16 10:24:02,479 | INFO     | sum of deviations: 335976662225.6782
[2025-04-16 06:24:49] 2025-04-16 10:24:02,502 | INFO     | mean x: 1744783569.8646464
[2025-04-16 06:24:49] 2025-04-16 10:24:02,502 | INFO     | mean y: 2191160.278787879
[2025-04-16 06:24:49] 2025-04-16 10:24:02,502 | INFO     | -- intersect: -15583754746.563185
[2025-04-16 06:24:49] 2025-04-16 10:24:02,503 | INFO     | intersect: -15583754746.563185
[2025-04-16 06:24:49] 2025-04-16 10:24:02,504 | INFO     | chi2: 5.012511936464256
[2025-04-16 06:24:49] 2025-04-16 10:24:02,505 | INFO     | current chi2=5.012511936464256 (change=23.143458747596988 %)
[2025-04-16 06:24:49] 2025-04-16 10:24:02,505 | INFO     | right removable region: 494
[2025-04-16 06:24:49] 2025-04-16 10:24:02,533 | INFO     | sum of square deviations: 37610784454.464676
[2025-04-16 06:24:49] 2025-04-16 10:24:02,735 | INFO     | sum of deviations: 169313544400.68668
[2025-04-16 06:24:49] 2025-04-16 10:24:02,735 | INFO     | mean x: 1744783874.868687
[2025-04-16 06:24:49] 2025-04-16 10:24:02,736 | INFO     | mean y: 2197953.7797979796
[2025-04-16 06:24:49] 2025-04-16 10:24:02,736 | INFO     | -- intersect: -7852345532.938506
[2025-04-16 06:24:49] 2025-04-16 10:24:02,736 | INFO     | intersect: -7852345532.938506
[2025-04-16 06:24:49] 2025-04-16 10:24:02,738 | INFO     | chi2: 4.1528448002787055
[2025-04-16 06:24:49] 2025-04-16 10:24:02,757 | INFO     | current chi2=4.1528448002787055 (change=36.324682763232026 %)
[2025-04-16 06:24:49] 2025-04-16 10:24:02,759 | INFO     | sum of square deviations: 36482304414.32657
[2025-04-16 06:24:49] 2025-04-16 10:24:02,854 | INFO     | sum of deviations: 99891066732.97961
[2025-04-16 06:24:49] 2025-04-16 10:24:02,854 | INFO     | mean x: 1744784027.3877552
[2025-04-16 06:24:49] 2025-04-16 10:24:02,855 | INFO     | mean y: 2207333.363265306
[2025-04-16 06:24:49] 2025-04-16 10:24:02,855 | INFO     | -- intersect: -4775131722.170308
[2025-04-16 06:24:49] 2025-04-16 10:24:02,855 | INFO     | intersect: -4775131722.170308
[2025-04-16 06:24:49] 2025-04-16 10:24:02,877 | INFO     | chi2: 3.29278107378177
[2025-04-16 06:24:49] 2025-04-16 10:24:02,878 | INFO     | current chi2=3.29278107378177 (change=20.71023040493145 %)
[2025-04-16 06:24:49] 2025-04-16 10:24:02,878 | INFO     | left removable region: 20
[2025-04-16 06:24:49] 2025-04-16 10:24:02,880 | INFO     | sum of square deviations: 33023681098.725735
[2025-04-16 06:24:49] 2025-04-16 10:24:02,976 | INFO     | sum of deviations: 33802781812.729977
[2025-04-16 06:24:49] 2025-04-16 10:24:02,977 | INFO     | mean x: 1744784149.4388185
[2025-04-16 06:24:49] 2025-04-16 10:24:02,977 | INFO     | mean y: 2233138.7320675105
[2025-04-16 06:24:49] 2025-04-16 10:24:02,977 | INFO     | -- intersect: -1783714276.9261405
[2025-04-16 06:24:49] 2025-04-16 10:24:02,978 | INFO     | intersect: -1783714276.9261405
[2025-04-16 06:24:49] 2025-04-16 10:24:03,003 | INFO     | chi2: 0.318756177187339
[2025-04-16 06:24:49] 2025-04-16 10:24:03,003 | INFO     | -- intersect: -1783714276.9261405
[2025-04-16 06:24:49] 2025-04-16 10:24:03,004 | INFO     | current memory leak: 1.02 B/s (using 474 data points, chi2=0.32)
[2025-04-16 06:24:49] 2025-04-16 10:24:03,027 | INFO     | ..............................
[2025-04-16 06:24:49] 2025-04-16 10:24:03,028 | INFO     | . Timing measurements:
[2025-04-16 06:24:49] 2025-04-16 10:24:03,028 | INFO     | . get job = 0 s
[2025-04-16 06:24:49] 2025-04-16 10:24:03,028 | INFO     | . initial setup = 5 s
[2025-04-16 06:24:49] 2025-04-16 10:24:03,029 | INFO     | . payload setup = 37 s
[2025-04-16 06:24:49] 2025-04-16 10:24:03,029 | INFO     | . stage-in = 0 s
[2025-04-16 06:24:49] 2025-04-16 10:24:03,029 | INFO     | . payload execution = 30513 s
[2025-04-16 06:24:49] 2025-04-16 10:24:03,029 | INFO     | . stage-out = 9 s
[2025-04-16 06:24:49] 2025-04-16 10:24:03,029 | INFO     | . log creation = 1 s
[2025-04-16 06:24:49] 2025-04-16 10:24:03,030 | INFO     | ..............................
[2025-04-16 06:24:49] 2025-04-16 10:24:04,652 | INFO     | 
[2025-04-16 06:24:49] 2025-04-16 10:24:04,652 | INFO     | job summary report
[2025-04-16 06:24:49] 2025-04-16 10:24:04,652 | INFO     | --------------------------------------------------
[2025-04-16 06:24:49] 2025-04-16 10:24:04,652 | INFO     | PanDA job id: 6603695570
[2025-04-16 06:24:49] 2025-04-16 10:24:04,653 | INFO     | task id: 44075483
[2025-04-16 06:24:49] 2025-04-16 10:24:04,653 | INFO     | errors: (none)
[2025-04-16 06:24:49] 2025-04-16 10:24:04,653 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 06:24:49] 2025-04-16 10:24:04,653 | INFO     | pilot state: finished 
[2025-04-16 06:24:49] 2025-04-16 10:24:04,653 | INFO     | transexitcode: 0
[2025-04-16 06:24:49] 2025-04-16 10:24:04,654 | INFO     | exeerrorcode: 0
[2025-04-16 06:24:49] 2025-04-16 10:24:04,654 | INFO     | exeerrordiag: 
[2025-04-16 06:24:49] 2025-04-16 10:24:04,654 | INFO     | exitcode: 0
[2025-04-16 06:24:49] 2025-04-16 10:24:04,654 | INFO     | exitmsg: OK
[2025-04-16 06:24:49] 2025-04-16 10:24:04,654 | INFO     | cpuconsumptiontime: 114982 s
[2025-04-16 06:24:49] 2025-04-16 10:24:04,655 | INFO     | nevents: 400
[2025-04-16 06:24:49] 2025-04-16 10:24:04,655 | INFO     | neventsw: 0
[2025-04-16 06:24:49] 2025-04-16 10:24:04,655 | INFO     | pid: 1813178
[2025-04-16 06:24:49] 2025-04-16 10:24:04,655 | INFO     | pgrp: 1813178
[2025-04-16 06:24:49] 2025-04-16 10:24:04,655 | INFO     | corecount: 8
[2025-04-16 06:24:49] 2025-04-16 10:24:04,663 | INFO     | event service: False
[2025-04-16 06:24:49] 2025-04-16 10:24:04,664 | INFO     | sizes: {0: 2416487, 1: 2417172, 3: 2417371, 4: 2417371, 5: 2417399, 16: 2417455, 27: 2417611, 30: 2417845, 39: 2417873, 30557: 2454113, 30560: 2454112, 30571: 2463
[2025-04-16 06:24:49] 2025-04-16 10:24:04,665 | INFO     | --------------------------------------------------
[2025-04-16 06:24:49] 2025-04-16 10:24:04,666 | INFO     | 
[2025-04-16 06:24:49] 2025-04-16 10:24:04,666 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-16 06:24:49] 2025-04-16 10:24:04,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,749 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 06:24:49] 2025-04-16 10:24:04,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 06:24:49] 2025-04-16 10:24:04,750 | INFO     | job 6603695570 has completed (purged errors)
[2025-04-16 06:24:49] 2025-04-16 10:24:04,750 | INFO     | overall cleanup function is called
[2025-04-16 06:24:49] 2025-04-16 10:24:05,765 | INFO     | --- collectZombieJob: --- 10, [1813178]
[2025-04-16 06:24:49] 2025-04-16 10:24:05,765 | INFO     | zombie collector waiting for pid 1813178
[2025-04-16 06:24:49] 2025-04-16 10:24:05,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 06:24:49] 2025-04-16 10:24:05,766 | INFO     | collected zombie processes
[2025-04-16 06:24:49] 2025-04-16 10:24:05,766 | INFO     | will attempt to kill all subprocesses of pid=1813178
[2025-04-16 06:24:49] 2025-04-16 10:24:11,490 | INFO     | process IDs to be killed: [1813178] (in reverse order)
[2025-04-16 06:24:49] 2025-04-16 10:24:11,950 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 06:24:49] 2025-04-16 10:24:11,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 06:24:49] 2025-04-16 10:24:12,065 | INFO     | did not find any defunct processes belonging to 1813178
[2025-04-16 06:24:49] 2025-04-16 10:24:12,252 | INFO     | did not find any defunct processes belonging to 1813178
[2025-04-16 06:24:49] 2025-04-16 10:24:12,253 | INFO     | ready for new job
[2025-04-16 06:24:49] 2025-04-16 10:24:12,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 06:24:49] 2025-04-16 10:24:12,258 | INFO     | **************************************
[2025-04-16 06:24:49] 2025-04-16 10:24:12,259 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 06:24:49] 2025-04-16 10:24:12,259 | INFO     | **************************************
[2025-04-16 06:24:49] 2025-04-16 10:24:12,259 | INFO     | 
[2025-04-16 06:24:49] 2025-04-16 10:24:12,385 | INFO     | architecture information:
[2025-04-16 06:24:49] 2025-04-16 10:24:12,445 | INFO     | executing command: cat /etc/os-release
[2025-04-16 06:24:49] 2025-04-16 10:24:12,560 | INFO     | cat /etc/os-release:
[2025-04-16 06:24:49] NAME="CentOS Linux"
[2025-04-16 06:24:49] VERSION="7 (Core)"
[2025-04-16 06:24:49] ID="centos"
[2025-04-16 06:24:49] ID_LIKE="rhel fedora"
[2025-04-16 06:24:49] VERSION_ID="7"
[2025-04-16 06:24:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 06:24:49] ANSI_COLOR="0;31"
[2025-04-16 06:24:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 06:24:49] HOME_URL="https://www.centos.org/"
[2025-04-16 06:24:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 06:24:49] 
[2025-04-16 06:24:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 06:24:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 06:24:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 06:24:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 06:24:49] 
[2025-04-16 06:24:49] 2025-04-16 10:24:12,561 | INFO     | **************************************
[2025-04-16 06:24:49] 2025-04-16 10:24:13,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-16 06:24:49] 2025-04-16 10:24:13,137 | INFO     | PID=1804886 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-16 06:24:49] 2025-04-16 10:24:13,138 | INFO     | .. there are 25 such processes running
[2025-04-16 06:24:49] 2025-04-16 10:24:13,143 | INFO     | sufficient remaining disk space (93293903872 B)
[2025-04-16 06:24:49] 2025-04-16 10:24:13,144 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 06:24:49] 2025-04-16 10:24:13,144 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 06:24:49] 2025-04-16 10:24:13,144 | INFO     | update_server=False
[2025-04-16 06:24:49] 2025-04-16 10:24:13,144 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 06:24:49] 2025-04-16 10:24:13,159 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 06:24:49] 2025-04-16 10:24:13,159 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 06:24:49] 2025-04-16 10:24:13,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 06:24:49] 2025-04-16 10:24:13,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 06:24:49] 2025-04-16 10:24:13,304 | INFO     | all payload control threads have been joined
[2025-04-16 06:24:49] 2025-04-16 10:24:13,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 06:24:49] 2025-04-16 10:24:13,639 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 06:24:49] 2025-04-16 10:24:13,639 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 06:24:49] 2025-04-16 10:24:13,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 06:24:49] 2025-04-16 10:24:13,640 | INFO     | will abort loop
[2025-04-16 06:24:49] 2025-04-16 10:24:13,761 | INFO     | all data control threads have been joined
[2025-04-16 06:24:49] 2025-04-16 10:24:14,151 | INFO     | [job] retrieve thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 06:24:49] 2025-04-16 10:24:14,310 | INFO     | [payload] control thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,364 | INFO     | all job control threads have been joined
[2025-04-16 06:24:49] 2025-04-16 10:24:14,383 | INFO     | [job] validate thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,584 | INFO     | [job] queue monitor thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,620 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,629 | INFO     | [payload] validate_post thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,647 | INFO     | [job] job monitor thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,770 | INFO     | [data] control thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:14,863 | INFO     | [payload] failed_post thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:15,145 | INFO     | [data] copytool_in thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:15,146 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:15,371 | INFO     | [job] control thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:15,376 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:15,398 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:16,242 | INFO     | [data] copytool_out thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:16,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 06:24:49] 2025-04-16 10:24:20,372 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 06:24:49] 2025-04-16 10:24:22,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196471592768)>', '<ExcThread(monitor, started 140195810748160)>']
[2025-04-16 06:24:49] 2025-04-16 10:24:23,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 06:24:49] 2025-04-16 10:24:23,218 | INFO     | [monitor] control thread has ended
[2025-04-16 06:24:49] 2025-04-16 10:24:27,284 | INFO     | all workflow threads have been joined
[2025-04-16 06:24:49] 2025-04-16 10:24:27,285 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 06:24:49] 2025-04-16 10:24:27,285 | INFO     | traces error code: 0
[2025-04-16 06:24:49] 2025-04-16 10:24:27,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 06:24:49] 2025-04-16 10:24:28,520 [wrapper] ==== pilot stdout END ====
[2025-04-16 06:24:49] 2025-04-16 10:24:28,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 06:24:49] 2025-04-16 10:24:28,532 [wrapper] pilotpid: 1804886
[2025-04-16 06:24:49] 2025-04-16 10:24:28,542 [wrapper] Pilot exit status: 0
[2025-04-16 06:24:49] 2025-04-16 10:24:28,605 [wrapper] pandaids: 6603695570
[2025-04-16 06:24:49] 2025-04-16 10:24:29,253 [wrapper] cleanup supervisor_pilot 3592134 1804887
[2025-04-16 06:24:49] 2025-04-16 10:24:29,261 [wrapper] Test setup, not cleaning
[2025-04-16 06:24:49] 2025-04-16 10:24:29,266 [wrapper] apfmon messages muted
[2025-04-16 06:24:49] 2025-04-16 10:24:29,272 [wrapper] ==== wrapper stdout END ====
[2025-04-16 06:24:49] 2025-04-16 10:24:29,277 [wrapper] ==== wrapper stderr END ====
[2025-04-16 06:24:49]  *** Error codes and diagnostics ***
[2025-04-16 06:24:49]     "exeErrorCode": 0,
[2025-04-16 06:24:49]     "exeErrorDiag": "",
[2025-04-16 06:24:49]     "pilotErrorCode": 0,
[2025-04-16 06:24:49]     "pilotErrorDiag": "",
[2025-04-16 06:24:49]  *** Listing of results directory ***
[2025-04-16 06:24:49] total 422976
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas      5111 Apr 15 18:17 queuedata.json
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas    495897 Apr 15 18:17 pilot3.tar.gz
[2025-04-16 06:24:49] -rwx------. 1 boincer umatlas     37140 Apr 15 18:17 runpilot2-wrapper.sh
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas       100 Apr 15 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 06:24:49] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 15 21:51 run_atlas
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas       105 Apr 15 21:51 job.xml
[2025-04-16 06:24:49] -rw-r--r--. 2 boincer umatlas 225346081 Apr 15 21:51 EVNT.44075481._001284.pool.root.1
[2025-04-16 06:24:49] drwxrwx--x. 2 boincer umatlas      4096 Apr 15 21:51 shared
[2025-04-16 06:24:49] -rw-r--r--. 2 boincer umatlas    508890 Apr 15 21:51 input.tar.gz
[2025-04-16 06:24:49] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 21:51 start_atlas.sh
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas         0 Apr 15 21:51 boinc_lockfile
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas      2578 Apr 15 21:51 pandaJob.out
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas       467 Apr 15 21:51 setup.sh.local
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas    986044 Apr 15 21:52 agis_schedconf.cvmfs.json
[2025-04-16 06:24:49] drwx------. 4 boincer umatlas      4096 Apr 15 21:52 pilot3
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas      6858 Apr 16 06:18 init_data.xml
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas 198954168 Apr 16 06:21 HITS.44075483._032749.pool.root.1
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas       532 Apr 16 06:21 boinc_task_state.xml
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas      1041 Apr 16 06:23 memory_monitor_summary.json
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas   1603529 Apr 16 06:23 agis_ddmendpoints.agis.ALL.json
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas    501002 Apr 16 06:23 log.44075483._032749.job.log.tgz.1
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas      7731 Apr 16 06:24 heartbeat.json
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas        95 Apr 16 06:24 pilot_heartbeat.json
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas      5058 Apr 16 06:24 pilotlog.txt
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas   1991330 Apr 16 06:24 log.44075483._032749.job.log.1
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas       357 Apr 16 06:24 output.list
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas       620 Apr 16 06:24 runtime_log
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas   2508800 Apr 16 06:24 result.tar.gz
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas       661 Apr 16 06:24 UdGKDmtl3O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmH0YLDmbAxnsn.diag
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas     11429 Apr 16 06:24 runtime_log.err
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas        29 Apr 16 06:24 wrapper_checkpoint.txt
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 06:24 boinc_mmap_file
[2025-04-16 06:24:49] -rw-r--r--. 1 boincer umatlas     21270 Apr 16 06:24 stderr.txt
[2025-04-16 06:24:49] HITS file was successfully produced:
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas 198954168 Apr 16 06:21 shared/HITS.pool.root.1
[2025-04-16 06:24:49]  *** Contents of shared directory: ***
[2025-04-16 06:24:49] total 417336
[2025-04-16 06:24:49] -rw-r--r--. 2 boincer umatlas 225346081 Apr 15 21:51 ATLAS.root_0
[2025-04-16 06:24:49] -rw-r--r--. 2 boincer umatlas    508890 Apr 15 21:51 input.tar.gz
[2025-04-16 06:24:49] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 21:51 start_atlas.sh
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas 198954168 Apr 16 06:21 HITS.pool.root.1
[2025-04-16 06:24:49] -rw-------. 1 boincer umatlas   2508800 Apr 16 06:24 result.tar.gz
06:24:51 (1798770): run_atlas exited; CPU time 117666.677899
06:24:51 (1798770): called boinc_finish(0)

</stderr_txt>
]]>

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