Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 16:34:43 (360): Detected: vboxwrapper 26206
2025-04-17 16:34:43 (360): Detected: BOINC client v8.0.2
2025-04-17 16:34:44 (360): Detected: VirtualBox VboxManage Interface (Version: 6.1.36)
2025-04-17 16:34:44 (360): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 16:34:45 (360): Create VM. (boinc_3394897381f5d0e3, slot#0)
2025-04-17 16:34:45 (360): Setting Memory Size for VM. (4200MB)
2025-04-17 16:34:46 (360): Setting CPU Count for VM. (2)
2025-04-17 16:34:46 (360): Setting Chipset Options for VM.
2025-04-17 16:34:46 (360): Setting Graphics Controller Options for VM.
2025-04-17 16:34:47 (360): Setting Boot Options for VM.
2025-04-17 16:34:47 (360): Setting Network Configuration for NAT.
2025-04-17 16:34:47 (360): Enabling VM Network Access.
2025-04-17 16:34:47 (360): Disabling USB Support for VM.
2025-04-17 16:34:48 (360): Disabling COM Port Support for VM.
2025-04-17 16:34:48 (360): Disabling LPT Port Support for VM.
2025-04-17 16:34:48 (360): Disabling Audio Support for VM.
2025-04-17 16:34:48 (360): Disabling Clipboard Support for VM.
2025-04-17 16:34:49 (360): Disabling Drag and Drop Support for VM.
2025-04-17 16:34:49 (360): Adding storage controller(s) to VM.
2025-04-17 16:34:49 (360): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 16:34:50 (360): Adding VirtualBox Guest Additions to VM.
2025-04-17 16:34:51 (360): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 16:34:51 (360): forwarding host port 63557 to guest port 80
2025-04-17 16:34:51 (360): Enabling remote desktop for VM.
2025-04-17 16:34:52 (360): Enabling shared directory for VM.
2025-04-17 16:34:52 (360): Starting VM using VBoxManage interface. (boinc_3394897381f5d0e3, slot#0)
2025-04-17 16:34:58 (360): Successfully started VM. (PID = '4400')
2025-04-17 16:34:58 (360): Reporting VM Process ID to BOINC.
2025-04-17 16:34:58 (360): Guest Log: BIOS: VirtualBox 6.1.36
2025-04-17 16:34:58 (360): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 16:34:58 (360): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 16:34:58 (360): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 16:34:58 (360): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 16:34:58 (360): Detected: Web Application Enabled (http://localhost:63557)
2025-04-17 16:34:58 (360): Detected: Remote Desktop Enabled (localhost:63558)
2025-04-17 16:34:58 (360): Preference change detected
2025-04-17 16:34:58 (360): Setting CPU throttle for VM. (100%)
2025-04-17 16:34:58 (360): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 16:35:00 (360): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 16:35:00 (360): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 16:35:03 (360): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 16:35:03 (360): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 16:35:03 (360): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 16:35:08 (360): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 16:35:08 (360): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 16:35:15 (360): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.000226 main     Log opened 2025-04-17T16:35:12.992776000Z
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.000392 main     OS Product: Linux
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.000441 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.000484 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.000525 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.000526 main     Process ID: 1268
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.000527 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 16:35:15 (360): Guest Log: 00:00:00.002032 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 16:35:15 (360): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 16:35:15 (360): Guest Log: [INFO] Mounting shared directory
2025-04-17 16:35:15 (360): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 16:35:20 (360): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 16:35:20 (360): Guest Log: [INFO] Detected branch: prod
2025-04-17 16:35:20 (360): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 16:35:20 (360): Guest Log: Copying input files
2025-04-17 16:35:21 (360): Guest Log: Copied input files into RunAtlas.
2025-04-17 16:35:21 (360): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-04-17 16:35:25 (360): Guest Log: 00:00:10.008505 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 293 235 000ns (GuestNow=1 744 900 524 706 392 000 ns GuestLast=1 744 907 712 999 627 000 ns fSetTimeLastLoop=true )
2025-04-17 16:35:30 (360): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 16:35:30 (360): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 16:35:30 (360): Guest Log: 2.6.3.0 1541 0 31548 144968 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-04-17 16:35:31 (360): Guest Log: copied the webapp to /var/www
2025-04-17 16:35:31 (360): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-17 16:35:31 (360): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-17 16:35:31 (360): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 16:35:31 (360): Guest Log:  *** Starting ATLAS job. (PandaID=6603678592 taskID=44075483) ***
2025-04-17 18:14:59 (360): Status Report: Elapsed Time: '6000.000000'
2025-04-17 18:14:59 (360): Status Report: CPU Time: '11266.595021'
2025-04-17 19:55:00 (360): Status Report: Elapsed Time: '12000.000000'
2025-04-17 19:55:00 (360): Status Report: CPU Time: '23257.315484'
2025-04-17 21:35:01 (360): Status Report: Elapsed Time: '18000.000000'
2025-04-17 21:35:01 (360): Status Report: CPU Time: '35252.653577'
2025-04-17 22:51:59 (360): Guest Log:  *** Job finished ***
2025-04-17 22:51:59 (360): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:42,804 | INFO     | [data] queue_monitor thread has finished
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:49,402 | INFO     | job.realtimelogging is not enabled
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:50,422 | INFO     | [payload] run_realtimelog thread has finished
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:52,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719222884160)>', '<ExcThread(monitor, started 140718429435648)>']
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:52,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:52,692 | INFO     | [monitor] control thread has ended
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,126 | INFO     | all workflow threads have been joined
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,127 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,127 | INFO     | traces error code: 0
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,208 [wrapper] ==== pilot stdout END ====
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,212 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,217 [wrapper] pilotpid: 5825
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,222 [wrapper] Pilot exit status: 0
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,261 [wrapper] pandaids: 6603678592
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,289 [wrapper] cleanup supervisor_pilot 29228 5826
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,294 [wrapper] Test setup, not cleaning
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,299 [wrapper] apfmon messages muted
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,304 [wrapper] ==== wrapper stdout END ====
2025-04-17 22:51:59 (360): Guest Log: 2025-04-17 20:51:57,308 [wrapper] ==== wrapper stderr END ====
2025-04-17 22:51:59 (360): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 22:51:59 (360): Guest Log:     "exeErrorCode": 0,
2025-04-17 22:51:59 (360): Guest Log:     "exeErrorDiag": "",
2025-04-17 22:51:59 (360): Guest Log:     "pilotErrorCode": 0,
2025-04-17 22:51:59 (360): Guest Log:     "pilotErrorDiag": "",
2025-04-17 22:51:59 (360): Guest Log:  *** Listing of results directory ***
2025-04-17 22:51:59 (360): Guest Log: total 202976
2025-04-17 22:51:59 (360): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 15 05:09 pilot3.tar.gz
2025-04-17 22:51:59 (360): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 15 05:24 queuedata.json
2025-04-17 22:51:59 (360): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 15 05:25 runpilot2-wrapper.sh
2025-04-17 22:51:59 (360): Guest Log: -rwxr-xr-x. 1 atlas atlas      8322 Apr 17 14:35 init_data.xml
2025-04-17 22:51:59 (360): Guest Log: -rwxr-xr-x. 1 atlas atlas    508893 Apr 17 14:35 input.tar.gz
2025-04-17 22:51:59 (360): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 14:35 start_atlas.sh
2025-04-17 22:51:59 (360): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 14:35 EVNT.44075481._000951.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 22:51:59 (360): Guest Log: -rw-r--r--. 1 atlas atlas      2577 Apr 17 14:35 pandaJob.out
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas       461 Apr 17 14:35 setup.sh.local
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas    990266 Apr 17 14:36 agis_schedconf.cvmfs.json
2025-04-17 22:51:59 (360): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 14:36 pilot3
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 20:50 pilot_heartbeat.json
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas 199353770 Apr 17 20:50 HITS.44075483._024413.pool.root.1
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 17 20:51 memory_monitor_summary.json
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 20:51 agis_ddmendpoints.agis.ALL.json
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas    366006 Apr 17 20:51 log.44075483._024413.job.log.tgz.1
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas      7713 Apr 17 20:51 heartbeat.json
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas      4671 Apr 17 20:51 pilotlog.txt
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas   1979280 Apr 17 20:51 log.44075483._024413.job.log.1
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 20:51 output.list
2025-04-17 22:51:59 (360): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 20:51 runtime_log
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas   2365440 Apr 17 20:51 result.tar.gz
2025-04-17 22:51:59 (360): Guest Log: -rw-r--r--. 1 atlas atlas     11326 Apr 17 20:51 runtime_log.err
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas       663 Apr 17 20:51 dqFLDmbynO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmubXLDmw3axWo.diag
2025-04-17 22:51:59 (360): Guest Log: Looking for outputfile HITS.44075483._024413.pool.root.1
2025-04-17 22:51:59 (360): Guest Log: HITS file was successfully produced
2025-04-17 22:51:59 (360): Guest Log: -rw-------. 1 atlas atlas 199353770 Apr 17 20:50 /home/atlas/RunAtlas/HITS.44075483._024413.pool.root.1
2025-04-17 22:52:00 (360): Guest Log: Successfully finished the ATLAS job!
2025-04-17 22:52:00 (360): Guest Log: Copying the results back to the shared directory!
2025-04-17 22:52:00 (360): Guest Log:  *** Contents of shared directory: ***
2025-04-17 22:52:01 (360): Guest Log: total 416640
2025-04-17 22:52:01 (360): Guest Log: -rwxrwxrwx. 1 root root 224370568 Apr 17 14:34 ATLAS.root_0
2025-04-17 22:52:01 (360): Guest Log: -rwxrwxrwx. 1 root root 199353770 Apr 17 20:52 HITS.pool.root.1
2025-04-17 22:52:01 (360): Guest Log: -rwxrwxrwx. 1 root root      8322 Apr 17 14:34 init_data.xml
2025-04-17 22:52:01 (360): Guest Log: -rwxrwxrwx. 1 root root    508893 Apr 16 01:37 input.tar.gz
2025-04-17 22:52:01 (360): Guest Log: -rwxrwxrwx. 1 root root   2365440 Apr 17 20:52 result.tar.gz
2025-04-17 22:52:01 (360): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 16 01:37 start_atlas.sh
2025-04-17 22:52:01 (360): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 22:52:01 (360): VM Completion File Detected.
2025-04-17 22:52:01 (360): Powering off VM.
2025-04-17 22:52:02 (360): Successfully stopped VM.
2025-04-17 22:52:02 (360): Deregistering VM. (boinc_3394897381f5d0e3, slot#0)
2025-04-17 22:52:02 (360): Removing network bandwidth throttle group from VM.
2025-04-17 22:52:03 (360): Removing VM from VirtualBox.
22:52:08 (360): called boinc_finish(0)

</stderr_txt>
]]>

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