Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-21 04:48:02 (30220): Detected: vboxwrapper 26206
2025-04-21 04:48:02 (30220): Detected: BOINC client v8.0.2
2025-04-21 04:48:03 (30220): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-21 04:48:03 (30220): Successfully copied 'init_data.xml' to the shared directory.
2025-04-21 04:48:03 (30220): Create VM. (boinc_2ca06f979a0758d8, slot#4)
2025-04-21 04:48:04 (30220): Setting Memory Size for VM. (4400MB)
2025-04-21 04:48:04 (30220): Setting CPU Count for VM. (4)
2025-04-21 04:48:04 (30220): Setting Chipset Options for VM.
2025-04-21 04:48:05 (30220): Setting Graphics Controller Options for VM.
2025-04-21 04:48:05 (30220): Setting Boot Options for VM.
2025-04-21 04:48:05 (30220): Setting Network Configuration for NAT.
2025-04-21 04:48:06 (30220): Enabling VM Network Access.
2025-04-21 04:48:06 (30220): Disabling USB Support for VM.
2025-04-21 04:48:06 (30220): Disabling COM Port Support for VM.
2025-04-21 04:48:06 (30220): Disabling LPT Port Support for VM.
2025-04-21 04:48:07 (30220): Disabling Audio Support for VM.
2025-04-21 04:48:07 (30220): Disabling Clipboard Support for VM.
2025-04-21 04:48:07 (30220): Disabling Drag and Drop Support for VM.
2025-04-21 04:48:07 (30220): Adding storage controller(s) to VM.
2025-04-21 04:48:08 (30220): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-21 04:48:11 (30220): Adding VirtualBox Guest Additions to VM.
2025-04-21 04:48:11 (30220): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-21 04:48:11 (30220): forwarding host port 57018 to guest port 80
2025-04-21 04:48:11 (30220): Enabling remote desktop for VM.
2025-04-21 04:48:12 (30220): Required extension pack not installed, remote desktop not enabled.
2025-04-21 04:48:12 (30220): Enabling shared directory for VM.
2025-04-21 04:48:12 (30220): Starting VM using VBoxManage interface. (boinc_2ca06f979a0758d8, slot#4)
2025-04-21 04:48:17 (30220): Successfully started VM. (PID = '39808')
2025-04-21 04:48:17 (30220): Reporting VM Process ID to BOINC.
2025-04-21 04:48:17 (30220): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-21 04:48:17 (30220): Guest Log: CPUID EDX: 0x178bfbff
2025-04-21 04:48:17 (30220): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-21 04:48:17 (30220): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-21 04:48:17 (30220): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-21 04:48:17 (30220): Detected: Web Application Enabled (http://localhost:57018)
2025-04-21 04:48:18 (30220): Preference change detected
2025-04-21 04:48:18 (30220): Setting CPU throttle for VM. (100%)
2025-04-21 04:48:18 (30220): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-21 04:48:20 (30220): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-21 04:48:20 (30220): Guest Log: BIOS: Booting from Hard Disk...
2025-04-21 04:48:23 (30220): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-21 04:48:23 (30220): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-21 04:48:23 (30220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-21 04:48:30 (30220): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-21 04:48:30 (30220): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-21 04:48:38 (30220): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.000150 main     Log opened 2025-04-21T04:48:35.755259000Z
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.000271 main     OS Product: Linux
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.000309 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.000341 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.000371 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.000372 main     Process ID: 1313
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.000372 main     Package type: LINUX_64BITS_GENERIC
2025-04-21 04:48:38 (30220): Guest Log: 00:00:00.002729 main     5.2.32 r132073 started. Verbose level = 0
2025-04-21 04:48:38 (30220): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-21 04:48:38 (30220): Guest Log: [INFO] Mounting shared directory
2025-04-21 04:48:38 (30220): Guest Log: [INFO] Checking for init_data.xml
2025-04-21 04:48:47 (30220): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-21 04:48:47 (30220): Guest Log: [INFO] Detected branch: prod
2025-04-21 04:48:48 (30220): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-21 04:48:48 (30220): Guest Log: Copying input files
2025-04-21 04:48:48 (30220): Guest Log: 00:00:10.013427 timesync vgsvcTimeSyncWorker: Radical guest time change: -35 988 016 339 000ns (GuestNow=1 745 174 927 743 573 000 ns GuestLast=1 745 210 915 759 912 000 ns fSetTimeLastLoop=true )
2025-04-21 04:48:50 (30220): Guest Log: Copied input files into RunAtlas.
2025-04-21 04:48:50 (30220): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-21 04:48:50 (30220): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-21 04:48:50 (30220): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-21 04:48:50 (30220): Guest Log: Further information can be found at the LHC@home message board.
2025-04-21 04:49:02 (30220): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-21 04:49:03 (30220): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-21 04:49:03 (30220): Guest Log: 2.6.3.0 1592 0 32180 145084 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-21 04:49:04 (30220): Guest Log: copied the webapp to /var/www
2025-04-21 04:49:04 (30220): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-21 04:49:04 (30220): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-21 04:49:05 (30220): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-21 04:49:05 (30220): Guest Log:  *** Starting ATLAS job. (PandaID=6603693138 taskID=44075483) ***
2025-04-21 05:13:01 (30220): Guest Log:  *** Job finished ***
2025-04-21 05:13:01 (30220): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:12:52,485 | INFO     | [data] control thread has finished
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:12:52,985 | INFO     | [data] copytool_out thread has finished
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:12:54,486 | INFO     | [data] queue_monitor thread has finished
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:12:55,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938765977408)>', '<ExcThread(monitor, started 139937861060352)>']
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:12:55,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:12:55,737 | INFO     | [monitor] control thread has ended
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,372 | INFO     | all workflow threads have been joined
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,373 | INFO     | end of generic workflow (traces error code: 0)
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,374 | INFO     | traces error code: 0
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,544 [wrapper] ==== pilot stdout END ====
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,554 [wrapper] ==== wrapper stdout RESUME ====
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,563 [wrapper] pilotpid: 5931
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,572 [wrapper] Pilot exit status: 0
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:00,998 [wrapper] pandaids: 6603693138
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:01,054 [wrapper] cleanup supervisor_pilot 18889 5932
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:01,063 [wrapper] Test setup, not cleaning
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:01,072 [wrapper] apfmon messages muted
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:01,079 [wrapper] ==== wrapper stdout END ====
2025-04-21 05:13:01 (30220): Guest Log: 2025-04-20 19:13:01,086 [wrapper] ==== wrapper stderr END ====
2025-04-21 05:13:01 (30220): Guest Log:  *** Error codes and diagnostics ***
2025-04-21 05:13:01 (30220): Guest Log:     "exeErrorCode": 65,
2025-04-21 05:13:01 (30220): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitialize(): standard std::exception is caught\"",
2025-04-21 05:13:01 (30220): Guest Log:     "pilotErrorCode": 1305,
2025-04-21 05:13:01 (30220): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"DetectorStore_Impl                                               FATAL in sysInitia",
2025-04-21 05:13:01 (30220): Guest Log:  *** Listing of results directory ***
2025-04-21 05:13:01 (30220): Guest Log: total 4132
2025-04-21 05:13:01 (30220): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 15 19:12 pilot3.tar.gz
2025-04-21 05:13:01 (30220): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 15 19:21 runpilot2-wrapper.sh
2025-04-21 05:13:01 (30220): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 15 19:21 queuedata.json
2025-04-21 05:13:01 (30220): Guest Log: -rwxr-xr-x. 1 atlas atlas    9318 Apr 20 18:48 init_data.xml
2025-04-21 05:13:01 (30220): Guest Log: -rwxr-xr-x. 1 atlas atlas  508892 Apr 20 18:48 input.tar.gz
2025-04-21 05:13:01 (30220): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 20 18:48 start_atlas.sh
2025-04-21 05:13:01 (30220): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 20 18:48 EVNT.44075481._001225.pool.root.1 -> /data/./ATLAS.root_0
2025-04-21 05:13:01 (30220): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 20 18:49 pandaJob.out
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas     424 Apr 20 18:49 setup.sh.local
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas  991284 Apr 20 18:51 agis_schedconf.cvmfs.json
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 20 18:51 agis_ddmendpoints.agis.ALL.json
2025-04-21 05:13:01 (30220): Guest Log: drwx------. 4 atlas atlas    4096 Apr 20 18:52 pilot3
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas    1013 Apr 20 19:10 memory_monitor_summary.json
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas   51607 Apr 20 19:10 log.44075483._031272.job.log.tgz.1
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas   11793 Apr 20 19:12 heartbeat.json
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas      95 Apr 20 19:12 pilot_heartbeat.json
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 20 19:13 pilotlog.txt
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas  159954 Apr 20 19:13 log.44075483._031272.job.log.1
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas     188 Apr 20 19:13 output.list
2025-04-21 05:13:01 (30220): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 20 19:13 runtime_log
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas  235520 Apr 20 19:13 result.tar.gz
2025-04-21 05:13:01 (30220): Guest Log: -rw-------. 1 atlas atlas     634 Apr 20 19:13 Wg7NDm610O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmekYLDmoTHbcn.diag
2025-04-21 05:13:01 (30220): Guest Log: -rw-r--r--. 1 atlas atlas   10749 Apr 20 19:13 runtime_log.err
2025-04-21 05:13:01 (30220): Guest Log: Looking for outputfile HITS.44075483._031272.pool.root.1
2025-04-21 05:13:01 (30220): Guest Log: No HITS file was produced
2025-04-21 05:13:01 (30220): Guest Log: Successfully finished the ATLAS job!
2025-04-21 05:13:01 (30220): Guest Log: Copying the results back to the shared directory!
2025-04-21 05:13:01 (30220): Guest Log:  *** Contents of shared directory: ***
2025-04-21 05:13:02 (30220): Guest Log: total 220688
2025-04-21 05:13:02 (30220): Guest Log: -rwxrwxrwx. 1 root root 225200084 Apr 20 18:48 ATLAS.root_0
2025-04-21 05:13:02 (30220): Guest Log: -rwxrwxrwx. 1 root root      9318 Apr 20 18:48 init_data.xml
2025-04-21 05:13:02 (30220): Guest Log: -rwxrwxrwx. 1 root root    508892 Apr 15 23:16 input.tar.gz
2025-04-21 05:13:02 (30220): Guest Log: -rwxrwxrwx. 1 root root    235520 Apr 20 19:13 result.tar.gz
2025-04-21 05:13:02 (30220): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 15 23:16 start_atlas.sh
2025-04-21 05:13:02 (30220): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-21 05:13:02 (30220): VM Completion File Detected.
2025-04-21 05:13:02 (30220): Powering off VM.
2025-04-21 05:13:03 (30220): Successfully stopped VM.
2025-04-21 05:13:03 (30220): Deregistering VM. (boinc_2ca06f979a0758d8, slot#4)
2025-04-21 05:13:03 (30220): Removing network bandwidth throttle group from VM.
2025-04-21 05:13:04 (30220): Removing VM from VirtualBox.
05:13:09 (30220): called boinc_finish(0)

</stderr_txt>
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