Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:42 (3450484): wrapper (7.7.26015): starting
19:02:42 (3450484): wrapper: running run_atlas (--nthreads 8)
[2025-04-15 19:02:42] Arguments: --nthreads 8
[2025-04-15 19:02:42] Threads: 8
[2025-04-15 19:02:42] Checking for CVMFS
[2025-04-15 19:02:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 19:02:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 19:02:43] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 19:02:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 19:02:43] 2.12.6.0 3567931 91857 253508 144906 1 349 21091275 32935937 24060 130560 0 74747205 99.672 70362957 24394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-15 19:02:43] CVMFS is ok
[2025-04-15 19:02:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 19:02:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 19:02:43] Further information can be found at the LHC@home message board.
[2025-04-15 19:02:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 19:02:43] Checking for apptainer binary...
[2025-04-15 19:02:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 19:02:43] Running /usr/bin/apptainer --version
[2025-04-15 19:02:43] apptainer version 1.4.0-1.el9
[2025-04-15 19:02:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 19:02:44] c6-8-25-3.aglt2.org
[2025-04-15 19:02:44] apptainer works
[2025-04-15 19:02:44] Set ATHENA_PROC_NUMBER=8
[2025-04-15 19:02:44] Set ATHENA_CORE_NUMBER=8
[2025-04-15 19:02:44] Starting ATLAS job with PandaID=6603692534
[2025-04-15 19:02:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 01:27:37]  *** The last 200 lines of the pilot log: ***
[2025-04-16 01:27:37] 2025-04-16 05:27:11,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 01:27:37] 2025-04-16 05:27:14,155 | INFO     | monitor loop #1292: job 0:6603692534 is in state 'finished'
[2025-04-16 01:27:37] 2025-04-16 05:27:14,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 01:27:37] 2025-04-16 05:27:15,752 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-16 01:27:37] 2025-04-16 05:27:15,753 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6603692534/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 01:27:37] 2025-04-16 05:27:15,753 | INFO     | extracted standard info from prmon json
[2025-04-16 01:27:37] 2025-04-16 05:27:15,753 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 01:27:37] 2025-04-16 05:27:15,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 01:27:37] 2025-04-16 05:27:15,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 01:27:37] 2025-04-16 05:27:15,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 01:27:37] 2025-04-16 05:27:15,765 | INFO     | fitting pss+swap vs Time
[2025-04-16 01:27:37] 2025-04-16 05:27:15,765 | INFO     | sum of square deviations: 16352339391.59997
[2025-04-16 01:27:37] 2025-04-16 05:27:15,773 | INFO     | sum of deviations: 158393491908.23987
[2025-04-16 01:27:37] 2025-04-16 05:27:15,773 | INFO     | mean x: 1744769782.72
[2025-04-16 01:27:37] 2025-04-16 05:27:15,774 | INFO     | mean y: 2337104.888
[2025-04-16 01:27:37] 2025-04-16 05:27:15,774 | INFO     | -- intersect: -16898007967.632032
[2025-04-16 01:27:37] 2025-04-16 05:27:15,774 | INFO     | intersect: -16898007967.632032
[2025-04-16 01:27:37] 2025-04-16 05:27:15,779 | INFO     | chi2: 7.1245724786514755
[2025-04-16 01:27:37] 2025-04-16 05:27:15,779 | INFO     | sum of square deviations: 15707000838.929668
[2025-04-16 01:27:37] 2025-04-16 05:27:15,787 | INFO     | sum of deviations: 205743109656.12418
[2025-04-16 01:27:37] 2025-04-16 05:27:15,787 | INFO     | mean x: 1744769630.227027
[2025-04-16 01:27:37] 2025-04-16 05:27:15,787 | INFO     | mean y: 2348196.8675675676
[2025-04-16 01:27:37] 2025-04-16 05:27:15,787 | INFO     | -- intersect: -22852067680.335392
[2025-04-16 01:27:37] 2025-04-16 05:27:15,787 | INFO     | intersect: -22852067680.335392
[2025-04-16 01:27:37] 2025-04-16 05:27:15,788 | INFO     | chi2: 5.478892539611972
[2025-04-16 01:27:37] 2025-04-16 05:27:15,788 | INFO     | current chi2=5.478892539611972 (change=23.098648290416357 %)
[2025-04-16 01:27:37] 2025-04-16 05:27:15,788 | INFO     | right removable region: 369
[2025-04-16 01:27:37] 2025-04-16 05:27:15,788 | INFO     | sum of square deviations: 15706881888.929668
[2025-04-16 01:27:37] 2025-04-16 05:27:15,796 | INFO     | sum of deviations: 68146167240.40007
[2025-04-16 01:27:37] 2025-04-16 05:27:15,796 | INFO     | mean x: 1744769935.227027
[2025-04-16 01:27:37] 2025-04-16 05:27:15,796 | INFO     | mean y: 2358388.9
[2025-04-16 01:27:37] 2025-04-16 05:27:15,796 | INFO     | -- intersect: -7567532608.103306
[2025-04-16 01:27:37] 2025-04-16 05:27:15,796 | INFO     | intersect: -7567532608.103306
[2025-04-16 01:27:37] 2025-04-16 05:27:15,797 | INFO     | chi2: 4.536065747729021
[2025-04-16 01:27:37] 2025-04-16 05:27:15,797 | INFO     | current chi2=4.536065747729021 (change=36.3320990652958 %)
[2025-04-16 01:27:37] 2025-04-16 05:27:15,798 | INFO     | sum of square deviations: 15078611318.750626
[2025-04-16 01:27:37] 2025-04-16 05:27:15,805 | INFO     | sum of deviations: 8055763540.805454
[2025-04-16 01:27:37] 2025-04-16 05:27:15,805 | INFO     | mean x: 1744770087.7369864
[2025-04-16 01:27:37] 2025-04-16 05:27:15,805 | INFO     | mean y: 2372971.695890411
[2025-04-16 01:27:37] 2025-04-16 05:27:15,805 | INFO     | -- intersect: -929772234.699956
[2025-04-16 01:27:37] 2025-04-16 05:27:15,806 | INFO     | intersect: -929772234.699956
[2025-04-16 01:27:37] 2025-04-16 05:27:15,810 | INFO     | chi2: 3.4710852484514416
[2025-04-16 01:27:37] 2025-04-16 05:27:15,811 | INFO     | current chi2=3.4710852484514416 (change=23.478065762401286 %)
[2025-04-16 01:27:37] 2025-04-16 05:27:15,811 | INFO     | left removable region: 20
[2025-04-16 01:27:37] 2025-04-16 05:27:15,811 | INFO     | sum of square deviations: 13181239737.782284
[2025-04-16 01:27:37] 2025-04-16 05:27:15,818 | INFO     | sum of deviations: -36849943948.10601
[2025-04-16 01:27:37] 2025-04-16 05:27:15,819 | INFO     | mean x: 1744770209.7593124
[2025-04-16 01:27:37] 2025-04-16 05:27:15,819 | INFO     | mean y: 2408952.724928367
[2025-04-16 01:27:37] 2025-04-16 05:27:15,819 | INFO     | -- intersect: 4880150782.096531
[2025-04-16 01:27:37] 2025-04-16 05:27:15,819 | INFO     | intersect: 4880150782.096531
[2025-04-16 01:27:37] 2025-04-16 05:27:15,819 | INFO     | chi2: 0.08887163576563972
[2025-04-16 01:27:37] 2025-04-16 05:27:15,820 | INFO     | -- intersect: 4880150782.096531
[2025-04-16 01:27:37] 2025-04-16 05:27:15,820 | INFO     | current memory leak: -2.80 B/s (using 349 data points, chi2=0.09)
[2025-04-16 01:27:37] 2025-04-16 05:27:15,820 | INFO     | ..............................
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . Timing measurements:
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . get job = 0 s
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . initial setup = 16 s
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . payload setup = 37 s
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . stage-in = 0 s
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . payload execution = 22844 s
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . stage-out = 6 s
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | . log creation = 1 s
[2025-04-16 01:27:37] 2025-04-16 05:27:15,821 | INFO     | ..............................
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | 
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | job summary report
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | --------------------------------------------------
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | PanDA job id: 6603692534
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | task id: 44075483
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | errors: (none)
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | pilot state: finished 
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | transexitcode: 0
[2025-04-16 01:27:37] 2025-04-16 05:27:16,044 | INFO     | exeerrorcode: 0
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | exeerrordiag: 
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | exitcode: 0
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | exitmsg: OK
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | cpuconsumptiontime: 45455 s
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | nevents: 400
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | neventsw: 0
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | pid: 3470419
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | pgrp: 3470419
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | corecount: 8
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | event service: False
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | sizes: {0: 2416538, 1: 2417139, 2: 2417223, 3: 2417279, 4: 2417450, 5: 2417478, 16: 2417662, 26: 2417690, 36: 2417924, 38: 2417952, 22884: 2451935, 22885: 2452214,
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | --------------------------------------------------
[2025-04-16 01:27:37] 2025-04-16 05:27:16,045 | INFO     | 
[2025-04-16 01:27:37] 2025-04-16 05:27:16,046 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-04-16 01:27:37] 2025-04-16 05:27:16,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 01:27:37] 2025-04-16 05:27:16,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 01:27:37] 2025-04-16 05:27:16,199 | INFO     | job 6603692534 has completed (purged errors)
[2025-04-16 01:27:37] 2025-04-16 05:27:16,199 | INFO     | overall cleanup function is called
[2025-04-16 01:27:37] 2025-04-16 05:27:17,216 | INFO     | --- collectZombieJob: --- 10, [3470419]
[2025-04-16 01:27:37] 2025-04-16 05:27:17,216 | INFO     | zombie collector waiting for pid 3470419
[2025-04-16 01:27:37] 2025-04-16 05:27:17,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 01:27:37] 2025-04-16 05:27:17,216 | INFO     | collected zombie processes
[2025-04-16 01:27:37] 2025-04-16 05:27:17,216 | INFO     | will attempt to kill all subprocesses of pid=3470419
[2025-04-16 01:27:37] 2025-04-16 05:27:20,063 | INFO     | process IDs to be killed: [3470419] (in reverse order)
[2025-04-16 01:27:37] 2025-04-16 05:27:20,479 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 01:27:37] 2025-04-16 05:27:20,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 01:27:37] 2025-04-16 05:27:20,746 | INFO     | did not find any defunct processes belonging to 3470419
[2025-04-16 01:27:37] 2025-04-16 05:27:20,959 | INFO     | did not find any defunct processes belonging to 3470419
[2025-04-16 01:27:37] 2025-04-16 05:27:20,960 | INFO     | ready for new job
[2025-04-16 01:27:37] 2025-04-16 05:27:20,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 01:27:37] 2025-04-16 05:27:20,961 | INFO     | **************************************
[2025-04-16 01:27:37] 2025-04-16 05:27:20,962 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 01:27:37] 2025-04-16 05:27:20,962 | INFO     | **************************************
[2025-04-16 01:27:37] 2025-04-16 05:27:20,962 | INFO     | 
[2025-04-16 01:27:37] 2025-04-16 05:27:21,019 | INFO     | architecture information:
[2025-04-16 01:27:37] 2025-04-16 05:27:21,035 | INFO     | executing command: cat /etc/os-release
[2025-04-16 01:27:37] 2025-04-16 05:27:21,133 | INFO     | cat /etc/os-release:
[2025-04-16 01:27:37] NAME="CentOS Linux"
[2025-04-16 01:27:37] VERSION="7 (Core)"
[2025-04-16 01:27:37] ID="centos"
[2025-04-16 01:27:37] ID_LIKE="rhel fedora"
[2025-04-16 01:27:37] VERSION_ID="7"
[2025-04-16 01:27:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 01:27:37] ANSI_COLOR="0;31"
[2025-04-16 01:27:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 01:27:37] HOME_URL="https://www.centos.org/"
[2025-04-16 01:27:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 01:27:37] 
[2025-04-16 01:27:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 01:27:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 01:27:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 01:27:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 01:27:37] 
[2025-04-16 01:27:37] 2025-04-16 05:27:21,133 | INFO     | **************************************
[2025-04-16 01:27:37] 2025-04-16 05:27:21,498 | INFO     | PID=3457100 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-16 01:27:37] 2025-04-16 05:27:21,498 | INFO     | .. there are 25 such processes running
[2025-04-16 01:27:37] 2025-04-16 05:27:21,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-04-16 01:27:37] 2025-04-16 05:27:21,702 | INFO     | sufficient remaining disk space (73241985024 B)
[2025-04-16 01:27:37] 2025-04-16 05:27:21,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 01:27:37] 2025-04-16 05:27:21,703 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 01:27:37] 2025-04-16 05:27:21,703 | INFO     | update_server=False
[2025-04-16 01:27:37] 2025-04-16 05:27:21,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 01:27:37] 2025-04-16 05:27:21,704 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 01:27:37] 2025-04-16 05:27:21,704 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 01:27:37] 2025-04-16 05:27:21,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 01:27:37] 2025-04-16 05:27:21,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 01:27:37] 2025-04-16 05:27:21,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 01:27:37] 2025-04-16 05:27:21,800 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 01:27:37] 2025-04-16 05:27:21,800 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 01:27:37] 2025-04-16 05:27:21,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 01:27:37] 2025-04-16 05:27:21,800 | INFO     | will abort loop
[2025-04-16 01:27:37] 2025-04-16 05:27:22,027 | INFO     | all data control threads have been joined
[2025-04-16 01:27:37] 2025-04-16 05:27:22,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 01:27:37] 2025-04-16 05:27:22,537 | INFO     | all job control threads have been joined
[2025-04-16 01:27:37] 2025-04-16 05:27:22,709 | INFO     | [job] retrieve thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:22,721 | INFO     | [job] queue monitor thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:22,814 | INFO     | [job] job monitor thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:22,865 | INFO     | [payload] failed_post thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:22,932 | INFO     | all payload control threads have been joined
[2025-04-16 01:27:37] 2025-04-16 05:27:22,955 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,040 | INFO     | [data] control thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,292 | INFO     | [job] validate thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,524 | INFO     | [data] copytool_in thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,537 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,562 | INFO     | [job] control thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,625 | INFO     | [payload] validate_post thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,791 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:23,944 | INFO     | [payload] control thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:24,229 | INFO     | [data] copytool_out thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:24,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 01:27:37] 2025-04-16 05:27:28,327 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 01:27:37] 2025-04-16 05:27:30,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140018184349504)>', '<ExcThread(monitor, started 140017443780352)>']
[2025-04-16 01:27:37] 2025-04-16 05:27:30,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 01:27:37] 2025-04-16 05:27:30,810 | INFO     | [monitor] control thread has ended
[2025-04-16 01:27:37] 2025-04-16 05:27:35,245 | INFO     | all workflow threads have been joined
[2025-04-16 01:27:37] 2025-04-16 05:27:35,245 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 01:27:37] 2025-04-16 05:27:35,245 | INFO     | traces error code: 0
[2025-04-16 01:27:37] 2025-04-16 05:27:35,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 01:27:37] 2025-04-16 05:27:36,521 [wrapper] ==== pilot stdout END ====
[2025-04-16 01:27:37] 2025-04-16 05:27:36,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 01:27:37] 2025-04-16 05:27:36,549 [wrapper] pilotpid: 3457100
[2025-04-16 01:27:37] 2025-04-16 05:27:36,570 [wrapper] Pilot exit status: 0
[2025-04-16 01:27:37] 2025-04-16 05:27:36,656 [wrapper] pandaids: 6603692534
[2025-04-16 01:27:37] 2025-04-16 05:27:37,054 [wrapper] cleanup supervisor_pilot  977608 3457101
[2025-04-16 01:27:37] 2025-04-16 05:27:37,076 [wrapper] Test setup, not cleaning
[2025-04-16 01:27:37] 2025-04-16 05:27:37,092 [wrapper] apfmon messages muted
[2025-04-16 01:27:37] 2025-04-16 05:27:37,122 [wrapper] ==== wrapper stdout END ====
[2025-04-16 01:27:37] 2025-04-16 05:27:37,148 [wrapper] ==== wrapper stderr END ====
[2025-04-16 01:27:37]  *** Error codes and diagnostics ***
[2025-04-16 01:27:37]     "exeErrorCode": 0,
[2025-04-16 01:27:37]     "exeErrorDiag": "",
[2025-04-16 01:27:37]     "pilotErrorCode": 0,
[2025-04-16 01:27:37]     "pilotErrorDiag": "",
[2025-04-16 01:27:37]  *** Listing of results directory ***
[2025-04-16 01:27:37] total 418952
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas    495897 Apr 15 15:01 pilot3.tar.gz
[2025-04-16 01:27:37] -rwx------. 1 boincer umatlas     37140 Apr 15 15:11 runpilot2-wrapper.sh
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas      5111 Apr 15 15:11 queuedata.json
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas       100 Apr 15 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 01:27:37] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 15 19:02 run_atlas
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas       105 Apr 15 19:02 job.xml
[2025-04-16 01:27:37] -rw-r--r--. 2 boincer umatlas 224598991 Apr 15 19:02 EVNT.44075481._001221.pool.root.1
[2025-04-16 01:27:37] -rw-r--r--. 2 boincer umatlas    508891 Apr 15 19:02 input.tar.gz
[2025-04-16 01:27:37] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 19:02 start_atlas.sh
[2025-04-16 01:27:37] drwxrwx--x. 2 boincer umatlas      4096 Apr 15 19:02 shared
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas         0 Apr 15 19:02 boinc_lockfile
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas      2579 Apr 15 19:02 pandaJob.out
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas       467 Apr 15 19:02 setup.sh.local
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas    985986 Apr 15 19:03 agis_schedconf.cvmfs.json
[2025-04-16 01:27:37] drwx------. 4 boincer umatlas      4096 Apr 15 19:03 pilot3
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas 196095303 Apr 16 01:24 HITS.44075483._031191.pool.root.1
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas       531 Apr 16 01:25 boinc_task_state.xml
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas      1051 Apr 16 01:26 memory_monitor_summary.json
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas   1603529 Apr 16 01:26 agis_ddmendpoints.agis.ALL.json
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas    477482 Apr 16 01:26 log.44075483._031191.job.log.tgz.1
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas        95 Apr 16 01:26 pilot_heartbeat.json
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas      6858 Apr 16 01:27 init_data.xml
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas      7748 Apr 16 01:27 heartbeat.json
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas      5057 Apr 16 01:27 pilotlog.txt
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas        28 Apr 16 01:27 wrapper_checkpoint.txt
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas   1758917 Apr 16 01:27 log.44075483._031191.job.log.1
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 01:27 boinc_mmap_file
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas       357 Apr 16 01:27 output.list
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas       620 Apr 16 01:27 runtime_log
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas   2252800 Apr 16 01:27 result.tar.gz
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas       662 Apr 16 01:27 UK7MDm9r0O7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmkjYLDmkdn5Ko.diag
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas     11424 Apr 16 01:27 runtime_log.err
[2025-04-16 01:27:37] -rw-r--r--. 1 boincer umatlas     21259 Apr 16 01:27 stderr.txt
[2025-04-16 01:27:37] HITS file was successfully produced:
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas 196095303 Apr 16 01:24 shared/HITS.pool.root.1
[2025-04-16 01:27:37]  *** Contents of shared directory: ***
[2025-04-16 01:27:37] total 413564
[2025-04-16 01:27:37] -rw-r--r--. 2 boincer umatlas 224598991 Apr 15 19:02 ATLAS.root_0
[2025-04-16 01:27:37] -rw-r--r--. 2 boincer umatlas    508891 Apr 15 19:02 input.tar.gz
[2025-04-16 01:27:37] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 19:02 start_atlas.sh
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas 196095303 Apr 16 01:24 HITS.pool.root.1
[2025-04-16 01:27:37] -rw-------. 1 boincer umatlas   2252800 Apr 16 01:27 result.tar.gz
01:27:38 (3450484): run_atlas exited; CPU time 46519.836531
01:27:38 (3450484): called boinc_finish(0)

</stderr_txt>
]]>

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