Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-15 18:57:41 (19694): Detected: vboxwrapper 26206
2025-04-15 18:57:41 (19694): Detected: BOINC client v7.20.2
2025-04-15 18:57:41 (19694): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-15 18:57:41 (19694): Successfully copied 'init_data.xml' to the shared directory.
2025-04-15 18:57:42 (19694): Create VM. (boinc_53f878e082ef3745, slot#1)
2025-04-15 18:57:42 (19694): Setting Memory Size for VM. (4800MB)
2025-04-15 18:57:42 (19694): Setting CPU Count for VM. (8)
2025-04-15 18:57:43 (19694): Setting Chipset Options for VM.
2025-04-15 18:57:43 (19694): Setting Graphics Controller Options for VM.
2025-04-15 18:57:43 (19694): Setting Boot Options for VM.
2025-04-15 18:57:43 (19694): Setting Network Configuration for NAT.
2025-04-15 18:57:43 (19694): Enabling VM Network Access.
2025-04-15 18:57:44 (19694): Disabling USB Support for VM.
2025-04-15 18:57:44 (19694): Disabling COM Port Support for VM.
2025-04-15 18:57:44 (19694): Disabling LPT Port Support for VM.
2025-04-15 18:57:44 (19694): Disabling Audio Support for VM.
2025-04-15 18:57:44 (19694): Disabling Clipboard Support for VM.
2025-04-15 18:57:45 (19694): Disabling Drag and Drop Support for VM.
2025-04-15 18:57:45 (19694): Adding storage controller(s) to VM.
2025-04-15 18:57:45 (19694): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-15 18:57:47 (19694): Adding VirtualBox Guest Additions to VM.
2025-04-15 18:57:47 (19694): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-15 18:57:47 (19694): forwarding host port 35313 to guest port 80
2025-04-15 18:57:47 (19694): Enabling remote desktop for VM.
2025-04-15 18:57:48 (19694): Required extension pack not installed, remote desktop not enabled.
2025-04-15 18:57:48 (19694): Enabling shared directory for VM.
2025-04-15 18:57:48 (19694): Starting VM using VBoxManage interface. (boinc_53f878e082ef3745, slot#1)
2025-04-15 18:57:50 (19694): Successfully started VM. (PID = '20312')
2025-04-15 18:57:50 (19694): Reporting VM Process ID to BOINC.
2025-04-15 18:57:50 (19694): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-15 18:57:50 (19694): Guest Log: CPUID EDX: 0x178bfbff
2025-04-15 18:57:50 (19694): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-15 18:57:50 (19694): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-15 18:57:50 (19694): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-15 18:57:50 (19694): Detected: Web Application Enabled (http://localhost:35313)
2025-04-15 18:57:50 (19694): Preference change detected
2025-04-15 18:57:50 (19694): Setting CPU throttle for VM. (80%)
2025-04-15 18:57:50 (19694): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-15 18:57:52 (19694): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-15 18:57:52 (19694): Guest Log: BIOS: Booting from Hard Disk...
2025-04-15 18:57:55 (19694): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-15 18:57:55 (19694): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-15 18:57:55 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-15 18:57:56 (19694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-15 18:58:10 (19694): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-15 18:58:10 (19694): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-15 18:58:31 (19694): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.000343 main     Log opened 2025-04-15T22:58:29.722534000Z
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.000565 main     OS Product: Linux
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.000633 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.000690 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.000747 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.000749 main     Process ID: 1375
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.000750 main     Package type: LINUX_64BITS_GENERIC
2025-04-15 18:58:31 (19694): Guest Log: 00:00:00.006079 main     5.2.32 r132073 started. Verbose level = 0
2025-04-15 18:58:31 (19694): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-15 18:58:31 (19694): Guest Log: [INFO] Mounting shared directory
2025-04-15 18:58:32 (19694): Guest Log: [INFO] Checking for init_data.xml
2025-04-15 18:58:39 (19694): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-15 18:58:39 (19694): Guest Log: [INFO] Detected branch: prod
2025-04-15 18:58:40 (19694): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-15 18:58:40 (19694): Guest Log: Copying input files
2025-04-15 18:58:42 (19694): Guest Log: Copied input files into RunAtlas.
2025-04-15 18:58:42 (19694): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-15 18:58:42 (19694): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-15 18:58:42 (19694): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-15 18:58:42 (19694): Guest Log: Further information can be found at the LHC@home message board.
2025-04-15 18:58:51 (19694): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-15 18:58:52 (19694): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-15 18:58:52 (19694): Guest Log: 2.6.3.0 1658 0 30200 144906 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-15 18:58:53 (19694): Guest Log: copied the webapp to /var/www
2025-04-15 18:58:53 (19694): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-15 18:58:53 (19694): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-15 18:58:55 (19694): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-15 18:58:55 (19694): Guest Log:  *** Starting ATLAS job. (PandaID=6603687218 taskID=44075483) ***
2025-04-15 20:36:52 (19694): Status Report: Elapsed Time: '6000.000000'
2025-04-15 20:36:52 (19694): Status Report: CPU Time: '25046.120000'
2025-04-15 22:15:56 (19694): Status Report: Elapsed Time: '12000.000000'
2025-04-15 22:15:56 (19694): Status Report: CPU Time: '63030.060000'
2025-04-15 23:54:59 (19694): Status Report: Elapsed Time: '18000.000000'
2025-04-15 23:54:59 (19694): Status Report: CPU Time: '101036.090000'
2025-04-16 01:34:03 (19694): Status Report: Elapsed Time: '24000.000000'
2025-04-16 01:34:03 (19694): Status Report: CPU Time: '139030.430000'
2025-04-16 02:10:36 (19694): Guest Log:  *** Job finished ***
2025-04-16 02:10:36 (19694): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:27,642 | INFO     | [data] copytool_out thread has finished
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:27,857 | INFO     | [payload] validate_post thread has finished
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:29,270 | INFO     | [data] queue_monitor thread has finished
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:29,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735441127232)>', '<ExcThread(monitor, started 139734965786368)>']
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:30,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:30,273 | INFO     | [monitor] control thread has ended
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,624 | INFO     | all workflow threads have been joined
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,624 | INFO     | end of generic workflow (traces error code: 0)
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,625 | INFO     | traces error code: 0
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,788 [wrapper] ==== pilot stdout END ====
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,800 [wrapper] ==== wrapper stdout RESUME ====
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,812 [wrapper] pilotpid: 6073
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,823 [wrapper] Pilot exit status: 0
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,920 [wrapper] pandaids: 6603687218
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:34,992 [wrapper] cleanup supervisor_pilot 29904 6074
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:35,004 [wrapper] Test setup, not cleaning
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:35,016 [wrapper] apfmon messages muted
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:35,027 [wrapper] ==== wrapper stdout END ====
2025-04-16 02:10:36 (19694): Guest Log: 2025-04-16 06:10:35,038 [wrapper] ==== wrapper stderr END ====
2025-04-16 02:10:36 (19694): Guest Log:  *** Error codes and diagnostics ***
2025-04-16 02:10:36 (19694): Guest Log:     "exeErrorCode": 0,
2025-04-16 02:10:36 (19694): Guest Log:     "exeErrorDiag": "",
2025-04-16 02:10:36 (19694): Guest Log:     "pilotErrorCode": 0,
2025-04-16 02:10:36 (19694): Guest Log:     "pilotErrorDiag": "",
2025-04-16 02:10:36 (19694): Guest Log:  *** Listing of results directory ***
2025-04-16 02:10:36 (19694): Guest Log: total 197368
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 15 14:06 pilot3.tar.gz
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 15 14:07 queuedata.json
2025-04-16 02:10:36 (19694): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 15 14:09 runpilot2-wrapper.sh
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas      6436 Apr 15 22:58 init_data.xml
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 15 22:58 start_atlas.sh
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas    508897 Apr 15 22:58 input.tar.gz
2025-04-16 02:10:36 (19694): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 15 22:58 EVNT.44075481._001120.pool.root.1 -> /data/./ATLAS.root_0
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 15 22:58 pandaJob.out
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas       424 Apr 15 22:59 setup.sh.local
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas    985986 Apr 15 23:05 agis_schedconf.cvmfs.json
2025-04-16 02:10:36 (19694): Guest Log: drwx------. 4 atlas atlas      4096 Apr 15 23:05 pilot3
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas 193637599 Apr 16 06:09 HITS.44075483._028646.pool.root.1
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas        95 Apr 16 06:09 pilot_heartbeat.json
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas      1023 Apr 16 06:09 memory_monitor_summary.json
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 16 06:09 agis_ddmendpoints.agis.ALL.json
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas    463084 Apr 16 06:09 log.44075483._028646.job.log.tgz.1
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas      7670 Apr 16 06:10 heartbeat.json
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 16 06:10 pilotlog.txt
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas   1883297 Apr 16 06:10 log.44075483._028646.job.log.1
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas       357 Apr 16 06:10 output.list
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 16 06:10 runtime_log
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas   2365440 Apr 16 06:10 result.tar.gz
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 atlas atlas     10929 Apr 16 06:10 runtime_log.err
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas       659 Apr 16 06:10 ODhLDmq9vO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmsW1KDm9s5cOn.diag
2025-04-16 02:10:36 (19694): Guest Log: Looking for outputfile HITS.44075483._028646.pool.root.1
2025-04-16 02:10:36 (19694): Guest Log: HITS file was successfully produced
2025-04-16 02:10:36 (19694): Guest Log: -rw-------. 1 atlas atlas 193637599 Apr 16 06:09 /home/atlas/RunAtlas/HITS.44075483._028646.pool.root.1
2025-04-16 02:10:36 (19694): Guest Log: Successfully finished the ATLAS job!
2025-04-16 02:10:36 (19694): Guest Log: Copying the results back to the shared directory!
2025-04-16 02:10:36 (19694): Guest Log:  *** Contents of shared directory: ***
2025-04-16 02:10:36 (19694): Guest Log: total 221780
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 root root 224191378 Apr 15 22:57 ATLAS.root_0
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 root root      6436 Apr 15 22:57 init_data.xml
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 root root    508897 Apr 15 22:57 input.tar.gz
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 root root   2365440 Apr 16 06:10 result.tar.gz
2025-04-16 02:10:36 (19694): Guest Log: -rw-r--r--. 1 root root     17569 Apr 15 22:57 start_atlas.sh
2025-04-16 02:10:36 (19694): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-16 02:10:36 (19694): VM Completion File Detected.
2025-04-16 02:10:36 (19694): Powering off VM.
2025-04-16 02:10:37 (19694): Successfully stopped VM.
2025-04-16 02:10:37 (19694): Deregistering VM. (boinc_53f878e082ef3745, slot#1)
2025-04-16 02:10:37 (19694): Removing network bandwidth throttle group from VM.
2025-04-16 02:10:37 (19694): Removing VM from VirtualBox.
02:10:42 (19694): called boinc_finish(0)

</stderr_txt>
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