Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-15 18:51:56 (17660): Detected: vboxwrapper 26206
2025-04-15 18:51:56 (17660): Detected: BOINC client v8.0.4
2025-04-15 18:51:56 (17660): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-15 18:51:57 (17660): Successfully copied 'init_data.xml' to the shared directory.
2025-04-15 18:51:57 (17660): Create VM. (boinc_137582aad91b8c58, slot#1)
2025-04-15 18:51:58 (17660): Setting Memory Size for VM. (4400MB)
2025-04-15 18:51:58 (17660): Setting CPU Count for VM. (4)
2025-04-15 18:51:58 (17660): Setting Chipset Options for VM.
2025-04-15 18:51:58 (17660): Setting Graphics Controller Options for VM.
2025-04-15 18:51:59 (17660): Setting Boot Options for VM.
2025-04-15 18:51:59 (17660): Setting Network Configuration for NAT.
2025-04-15 18:51:59 (17660): Enabling VM Network Access.
2025-04-15 18:51:59 (17660): Disabling USB Support for VM.
2025-04-15 18:52:00 (17660): Disabling COM Port Support for VM.
2025-04-15 18:52:00 (17660): Disabling LPT Port Support for VM.
2025-04-15 18:52:00 (17660): Disabling Audio Support for VM.
2025-04-15 18:52:00 (17660): Disabling Clipboard Support for VM.
2025-04-15 18:52:01 (17660): Disabling Drag and Drop Support for VM.
2025-04-15 18:52:01 (17660): Adding storage controller(s) to VM.
2025-04-15 18:52:01 (17660): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-15 18:52:02 (17660): Adding VirtualBox Guest Additions to VM.
2025-04-15 18:52:02 (17660): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-15 18:52:02 (17660): forwarding host port 60228 to guest port 80
2025-04-15 18:52:02 (17660): Enabling remote desktop for VM.
2025-04-15 18:52:03 (17660): Required extension pack not installed, remote desktop not enabled.
2025-04-15 18:52:03 (17660): Enabling shared directory for VM.
2025-04-15 18:52:03 (17660): Starting VM using VBoxManage interface. (boinc_137582aad91b8c58, slot#1)
2025-04-15 18:52:08 (17660): Successfully started VM. (PID = '22640')
2025-04-15 18:52:08 (17660): Reporting VM Process ID to BOINC.
2025-04-15 18:52:08 (17660): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-15 18:52:08 (17660): Guest Log: CPUID EDX: 0x178bfbff
2025-04-15 18:52:08 (17660): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-15 18:52:08 (17660): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-15 18:52:08 (17660): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-15 18:52:08 (17660): Detected: Web Application Enabled (http://localhost:60228)
2025-04-15 18:52:08 (17660): Preference change detected
2025-04-15 18:52:08 (17660): Setting CPU throttle for VM. (80%)
2025-04-15 18:52:08 (17660): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-15 18:52:10 (17660): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-15 18:52:10 (17660): Guest Log: BIOS: Booting from Hard Disk...
2025-04-15 18:52:13 (17660): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-15 18:52:13 (17660): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-15 18:52:13 (17660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-15 18:52:19 (17660): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-15 18:52:19 (17660): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-15 18:52:23 (17660): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.000086 main     Log opened 2025-04-15T18:52:21.250881000Z
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.000153 main     OS Product: Linux
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.000177 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.000204 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.000224 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.000225 main     Process ID: 1308
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.000225 main     Package type: LINUX_64BITS_GENERIC
2025-04-15 18:52:23 (17660): Guest Log: 00:00:00.001537 main     5.2.32 r132073 started. Verbose level = 0
2025-04-15 18:52:23 (17660): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-15 18:52:23 (17660): Guest Log: [INFO] Mounting shared directory
2025-04-15 18:52:23 (17660): Guest Log: [INFO] Checking for init_data.xml
2025-04-15 18:52:26 (17660): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-15 18:52:26 (17660): Guest Log: [INFO] Detected branch: prod
2025-04-15 18:52:26 (17660): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-15 18:52:26 (17660): Guest Log: Copying input files
2025-04-15 18:52:27 (17660): Guest Log: Copied input files into RunAtlas.
2025-04-15 18:52:27 (17660): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-15 18:52:27 (17660): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-15 18:52:27 (17660): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-15 18:52:27 (17660): Guest Log: Further information can be found at the LHC@home message board.
2025-04-15 18:52:33 (17660): Guest Log: 00:00:10.003985 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 988 003 000ns (GuestNow=1 744 757 553 241 878 000 ns GuestLast=1 744 743 141 253 875 000 ns fSetTimeLastLoop=true )
2025-04-15 18:52:36 (17660): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-15 18:52:36 (17660): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-15 18:52:36 (17660): Guest Log: 2.6.3.0 1586 0 30196 144906 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-15 18:52:37 (17660): Guest Log: copied the webapp to /var/www
2025-04-15 18:52:37 (17660): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-15 18:52:37 (17660): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-15 18:52:37 (17660): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-15 18:52:37 (17660): Guest Log:  *** Starting ATLAS job. (PandaID=6593387745 taskID=43996149) ***
2025-04-15 20:32:13 (17660): Status Report: Elapsed Time: '6000.000000'
2025-04-15 20:32:13 (17660): Status Report: CPU Time: '18328.718750'
2025-04-15 22:12:19 (17660): Status Report: Elapsed Time: '12000.000000'
2025-04-15 22:12:19 (17660): Status Report: CPU Time: '39710.750000'
2025-04-15 22:52:44 (17660): Guest Log:  *** Job finished ***
2025-04-15 22:52:44 (17660): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:30,679 | INFO     | [data] queue_monitor thread has finished
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:37,082 | INFO     | job.realtimelogging is not enabled
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:38,085 | INFO     | [payload] run_realtimelog thread has finished
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:39,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140079064721216)>', '<ExcThread(monitor, started 140078378628864)>']
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:39,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:39,768 | INFO     | [monitor] control thread has ended
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,145 | INFO     | all workflow threads have been joined
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,146 | INFO     | end of generic workflow (traces error code: 0)
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,146 | INFO     | traces error code: 0
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,221 [wrapper] ==== pilot stdout END ====
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,226 [wrapper] ==== wrapper stdout RESUME ====
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,231 [wrapper] pilotpid: 5914
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,236 [wrapper] Pilot exit status: 0
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,313 [wrapper] pandaids: 6593387745
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,348 [wrapper] cleanup supervisor_pilot 14010 5915
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,352 [wrapper] Test setup, not cleaning
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,357 [wrapper] apfmon messages muted
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,362 [wrapper] ==== wrapper stdout END ====
2025-04-15 22:52:44 (17660): Guest Log: 2025-04-16 02:52:44,367 [wrapper] ==== wrapper stderr END ====
2025-04-15 22:52:44 (17660): Guest Log:  *** Error codes and diagnostics ***
2025-04-15 22:52:44 (17660): Guest Log:     "exeErrorCode": 0,
2025-04-15 22:52:44 (17660): Guest Log:     "exeErrorDiag": "",
2025-04-15 22:52:44 (17660): Guest Log:     "pilotErrorCode": 0,
2025-04-15 22:52:44 (17660): Guest Log:     "pilotErrorDiag": "",
2025-04-15 22:52:44 (17660): Guest Log:  *** Listing of results directory ***
2025-04-15 22:52:44 (17660): Guest Log: total 221504
2025-04-15 22:52:44 (17660): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  7 17:54 pilot3.tar.gz
2025-04-15 22:52:44 (17660): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  7 18:57 runpilot2-wrapper.sh
2025-04-15 22:52:44 (17660): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  7 18:57 queuedata.json
2025-04-15 22:52:44 (17660): Guest Log: -rwxr-xr-x. 1 atlas atlas      9192 Apr 15 22:52 init_data.xml
2025-04-15 22:52:44 (17660): Guest Log: -rwxr-xr-x. 1 atlas atlas    508891 Apr 15 22:52 input.tar.gz
2025-04-15 22:52:44 (17660): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 15 22:52 start_atlas.sh
2025-04-15 22:52:44 (17660): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 15 22:52 EVNT.43880848._000002.pool.root.1 -> /data/./ATLAS.root_0
2025-04-15 22:52:44 (17660): Guest Log: -rw-r--r--. 1 atlas atlas      2597 Apr 15 22:52 pandaJob.out
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas       424 Apr 15 22:52 setup.sh.local
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas    985986 Apr 15 22:53 agis_schedconf.cvmfs.json
2025-04-15 22:52:44 (17660): Guest Log: drwx------. 4 atlas atlas      4096 Apr 15 22:53 pilot3
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas 219894023 Apr 16 02:51 HITS.43996149._000049.pool.root.1
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas        95 Apr 16 02:52 pilot_heartbeat.json
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas      1034 Apr 16 02:52 memory_monitor_summary.json
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 16 02:52 agis_ddmendpoints.agis.ALL.json
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas    392863 Apr 16 02:52 log.43996149._000049.job.log.tgz.1
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas      7680 Apr 16 02:52 heartbeat.json
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas      4794 Apr 16 02:52 pilotlog.txt
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas   1182124 Apr 16 02:52 log.43996149._000049.job.log.1
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas       357 Apr 16 02:52 output.list
2025-04-15 22:52:44 (17660): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 16 02:52 runtime_log
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas   1597440 Apr 16 02:52 result.tar.gz
2025-04-15 22:52:44 (17660): Guest Log: -rw-r--r--. 1 atlas atlas     10899 Apr 16 02:52 runtime_log.err
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas       647 Apr 16 02:52 2OeLDmGq6L7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiIJLDm5kfnQo.diag
2025-04-15 22:52:44 (17660): Guest Log: Looking for outputfile HITS.43996149._000049.pool.root.1
2025-04-15 22:52:44 (17660): Guest Log: HITS file was successfully produced
2025-04-15 22:52:44 (17660): Guest Log: -rw-------. 1 atlas atlas 219894023 Apr 16 02:51 /home/atlas/RunAtlas/HITS.43996149._000049.pool.root.1
2025-04-15 22:52:46 (17660): Guest Log: Successfully finished the ATLAS job!
2025-04-15 22:52:46 (17660): Guest Log: Copying the results back to the shared directory!
2025-04-15 22:52:46 (17660): Guest Log:  *** Contents of shared directory: ***
2025-04-15 22:52:46 (17660): Guest Log: total 552624
2025-04-15 22:52:46 (17660): Guest Log: -rwxrwxrwx. 1 root root 343846567 Apr 15 22:51 ATLAS.root_0
2025-04-15 22:52:46 (17660): Guest Log: -rwxrwxrwx. 1 root root 219894023 Apr 16 02:52 HITS.pool.root.1
2025-04-15 22:52:46 (17660): Guest Log: -rwxrwxrwx. 1 root root      9192 Apr 15 22:51 init_data.xml
2025-04-15 22:52:46 (17660): Guest Log: -rwxrwxrwx. 1 root root    508891 Apr 15 22:50 input.tar.gz
2025-04-15 22:52:46 (17660): Guest Log: -rwxrwxrwx. 1 root root   1597440 Apr 16 02:52 result.tar.gz
2025-04-15 22:52:46 (17660): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 15 22:50 start_atlas.sh
2025-04-15 22:52:46 (17660): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-15 22:52:46 (17660): VM Completion File Detected.
2025-04-15 22:52:46 (17660): Powering off VM.
2025-04-15 22:52:47 (17660): Successfully stopped VM.
2025-04-15 22:52:47 (17660): Deregistering VM. (boinc_137582aad91b8c58, slot#1)
2025-04-15 22:52:47 (17660): Removing network bandwidth throttle group from VM.
2025-04-15 22:52:47 (17660): Removing VM from VirtualBox.
22:52:52 (17660): called boinc_finish(0)

</stderr_txt>
]]>

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