Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:41:42 (3785): wrapper (7.7.26015): starting
17:41:42 (3785): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 17:41:42] Arguments: --nthreads 12
[2025-04-15 17:41:42] Threads: 12
[2025-04-15 17:41:42] Checking for CVMFS
[2025-04-15 17:41:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 17:41:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 17:41:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 17:41:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 17:41:42] 2.11.2.0 2970 7741 88132 144904 0 56 14633794 20275201 1 130560 0 6693668 99.993 1389549 59814 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 17:41:42] CVMFS is ok
[2025-04-15 17:41:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 17:41:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 17:41:42] Further information can be found at the LHC@home message board.
[2025-04-15 17:41:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 17:41:42] Checking for apptainer binary...
[2025-04-15 17:41:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 17:41:42] Running /usr/bin/apptainer --version
[2025-04-15 17:41:42] apptainer version 1.3.2-1.el7
[2025-04-15 17:41:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 17:41:44] c-115-42.aglt2.org
[2025-04-15 17:41:44] apptainer works
[2025-04-15 17:41:44] Set ATHENA_PROC_NUMBER=12
[2025-04-15 17:41:44] Set ATHENA_CORE_NUMBER=12
[2025-04-15 17:41:44] Starting ATLAS job with PandaID=6603689931
[2025-04-15 17:41:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 19:01:23]  *** The last 200 lines of the pilot log: ***
[2025-04-15 19:01:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603689931/log.44075483._030562.job.log.tgz.1
[2025-04-15 19:01:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/57/log.44075483._030562.job.log.tgz.1
[2025-04-15 19:01:23]  workdir=None
[2025-04-15 19:01:23] ]
[2025-04-15 19:01:23] 2025-04-15 23:00:57,718 | INFO     | transferring file log.44075483._030562.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603689931/log.44075483._030562.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-15 19:01:23] 2025-04-15 23:00:57,718 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603689931/log.44075483._030562.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._030562.job
[2025-04-15 19:01:23] 2025-04-15 23:00:57,739 | INFO     | adding to output.list: log.44075483._030562.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/57/log.44075483._030562.job.log.tg
[2025-04-15 19:01:23] 2025-04-15 23:00:57,740 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 19:01:23] 2025-04-15 23:00:57,740 | INFO     | summary of transferred files:
[2025-04-15 19:01:23] 2025-04-15 23:00:57,740 | INFO     |  -- lfn=log.44075483._030562.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 19:01:23] 2025-04-15 23:00:57,740 | INFO     | stage-out finished correctly
[2025-04-15 19:01:23] 2025-04-15 23:00:57,818 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 19:01:23] 2025-04-15 23:00:57,996 | WARNING  | process 13978 can no longer be monitored (due to stat problems) - aborting
[2025-04-15 19:01:23] 2025-04-15 23:00:57,996 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603689931/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 19:01:23] 2025-04-15 23:00:57,996 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603689931/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 19:01:23] 2025-04-15 23:00:57,997 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4519500 B
[2025-04-15 19:01:23] 2025-04-15 23:00:57,997 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15787 B
[2025-04-15 19:01:23] 2025-04-15 23:00:57,998 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 19:01:23] 2025-04-15 23:00:58,015 | INFO     | sufficient remaining disk space (18604883968 B)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,016 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,016 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6603689931: 4818942 B (within 2537553920 B limit)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,017 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6603689931/HITS.44075483._030562.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,017 | INFO     | total size of present files: 0 B (workdir size: 4818942 B)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,017 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6603689931/HITS.44075483._030562.pool.root.1 since it does not exist
[2025-04-15 19:01:23] 2025-04-15 23:00:58,105 | INFO     | number of running child processes to parent process 13978: 1
[2025-04-15 19:01:23] 2025-04-15 23:00:58,105 | INFO     | maximum number of monitored processes: 6
[2025-04-15 19:01:23] 2025-04-15 23:00:58,697 | INFO     | job 6603689931 has state=finished
[2025-04-15 19:01:23] 2025-04-15 23:00:58,697 | INFO     | preparing for final server update for job 6603689931 in state='finished'
[2025-04-15 19:01:23] 2025-04-15 23:00:58,697 | INFO     | this job has now completed (state=finished)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,698 | INFO     | log transfer has been attempted: DONE
[2025-04-15 19:01:23] 2025-04-15 23:00:58,698 | INFO     | job 6603689931 has finished - writing final server update
[2025-04-15 19:01:23] 2025-04-15 23:00:58,698 | INFO     | total number of processed events: 400 (read)
[2025-04-15 19:01:23] 2025-04-15 23:00:58,700 | INFO     | executing command: lscpu
[2025-04-15 19:01:23] 2025-04-15 23:00:58,727 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 19:01:23] 2025-04-15 23:01:00,606 | INFO     | monitor loop #356: job 0:6603689931 is in state 'finished'
[2025-04-15 19:01:23] 2025-04-15 23:01:00,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 19:01:23] 2025-04-15 23:01:03,109 | INFO     | monitor loop #357: job 0:6603689931 is in state 'finished'
[2025-04-15 19:01:23] 2025-04-15 23:01:03,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 19:01:23] 2025-04-15 23:01:04,279 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-15 19:01:23] 2025-04-15 23:01:04,279 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603689931/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 19:01:23] 2025-04-15 23:01:04,280 | INFO     | extracted standard info from prmon json
[2025-04-15 19:01:23] 2025-04-15 23:01:04,280 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 19:01:23] 2025-04-15 23:01:04,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 19:01:23] 2025-04-15 23:01:04,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 19:01:23] 2025-04-15 23:01:04,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 19:01:23] 2025-04-15 23:01:04,284 | INFO     | fitting pss+swap vs Time
[2025-04-15 19:01:23] 2025-04-15 23:01:04,284 | INFO     | sum of square deviations: 110960220.0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,284 | INFO     | sum of deviations: 18086201100.0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,285 | INFO     | mean x: 1744755785.0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,285 | INFO     | mean y: 2615157.3661971833
[2025-04-15 19:01:23] 2025-04-15 23:01:04,285 | INFO     | -- intersect: -284387628462.3595
[2025-04-15 19:01:23] 2025-04-15 23:01:04,285 | INFO     | intersect: -284387628462.3595
[2025-04-15 19:01:23] 2025-04-15 23:01:04,285 | INFO     | chi2: 2.1034248410669267
[2025-04-15 19:01:23] 2025-04-15 23:01:04,286 | INFO     | -- intersect: -284387628462.3595
[2025-04-15 19:01:23] 2025-04-15 23:01:04,286 | INFO     | current memory leak: 163.00 B/s (using 71 data points, chi2=2.10)
[2025-04-15 19:01:23] 2025-04-15 23:01:04,286 | INFO     | ..............................
[2025-04-15 19:01:23] 2025-04-15 23:01:04,287 | INFO     | . Timing measurements:
[2025-04-15 19:01:23] 2025-04-15 23:01:04,287 | INFO     | . get job = 0 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,287 | INFO     | . initial setup = 2 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,287 | INFO     | . payload setup = 7 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,287 | INFO     | . stage-in = 0 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,287 | INFO     | . payload execution = 4714 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,287 | INFO     | . stage-out = 0 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,288 | INFO     | . log creation = 0 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,288 | INFO     | ..............................
[2025-04-15 19:01:23] 2025-04-15 23:01:04,365 | INFO     | 
[2025-04-15 19:01:23] 2025-04-15 23:01:04,366 | INFO     | job summary report
[2025-04-15 19:01:23] 2025-04-15 23:01:04,366 | INFO     | --------------------------------------------------
[2025-04-15 19:01:23] 2025-04-15 23:01:04,366 | INFO     | PanDA job id: 6603689931
[2025-04-15 19:01:23] 2025-04-15 23:01:04,366 | INFO     | task id: 44075483
[2025-04-15 19:01:23] 2025-04-15 23:01:04,366 | INFO     | errors: (none)
[2025-04-15 19:01:23] 2025-04-15 23:01:04,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 19:01:23] 2025-04-15 23:01:04,367 | INFO     | pilot state: finished 
[2025-04-15 19:01:23] 2025-04-15 23:01:04,367 | INFO     | transexitcode: 0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,367 | INFO     | exeerrorcode: 0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,367 | INFO     | exeerrordiag: 
[2025-04-15 19:01:23] 2025-04-15 23:01:04,367 | INFO     | exitcode: 0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,367 | INFO     | exitmsg: OK
[2025-04-15 19:01:23] 2025-04-15 23:01:04,368 | INFO     | cpuconsumptiontime: 43102 s
[2025-04-15 19:01:23] 2025-04-15 23:01:04,368 | INFO     | nevents: 400
[2025-04-15 19:01:23] 2025-04-15 23:01:04,368 | INFO     | neventsw: 0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,368 | INFO     | pid: 13978
[2025-04-15 19:01:23] 2025-04-15 23:01:04,368 | INFO     | pgrp: 13978
[2025-04-15 19:01:23] 2025-04-15 23:01:04,368 | INFO     | corecount: 12
[2025-04-15 19:01:23] 2025-04-15 23:01:04,369 | INFO     | event service: False
[2025-04-15 19:01:23] 2025-04-15 23:01:04,369 | INFO     | sizes: {0: 2417366, 5: 2417572, 11: 2417628, 4725: 2443665, 4726: 2452662, 4732: 2452804}
[2025-04-15 19:01:23] 2025-04-15 23:01:04,369 | INFO     | --------------------------------------------------
[2025-04-15 19:01:23] 2025-04-15 23:01:04,369 | INFO     | 
[2025-04-15 19:01:23] 2025-04-15 23:01:04,369 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 19:01:23] 2025-04-15 23:01:04,390 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 19:01:23] 2025-04-15 23:01:04,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 19:01:23] 2025-04-15 23:01:04,394 | INFO     | job 6603689931 has completed (purged errors)
[2025-04-15 19:01:23] 2025-04-15 23:01:04,394 | INFO     | overall cleanup function is called
[2025-04-15 19:01:23] 2025-04-15 23:01:05,402 | INFO     | --- collectZombieJob: --- 10, [13978]
[2025-04-15 19:01:23] 2025-04-15 23:01:05,402 | INFO     | zombie collector waiting for pid 13978
[2025-04-15 19:01:23] 2025-04-15 23:01:05,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 19:01:23] 2025-04-15 23:01:05,403 | INFO     | collected zombie processes
[2025-04-15 19:01:23] 2025-04-15 23:01:05,403 | INFO     | will attempt to kill all subprocesses of pid=13978
[2025-04-15 19:01:23] 2025-04-15 23:01:05,494 | INFO     | process IDs to be killed: [13978] (in reverse order)
[2025-04-15 19:01:23] 2025-04-15 23:01:05,541 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 19:01:23] 2025-04-15 23:01:05,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 19:01:23] 2025-04-15 23:01:05,545 | INFO     | did not find any defunct processes belonging to 13978
[2025-04-15 19:01:23] 2025-04-15 23:01:05,549 | INFO     | did not find any defunct processes belonging to 13978
[2025-04-15 19:01:23] 2025-04-15 23:01:05,549 | INFO     | ready for new job
[2025-04-15 19:01:23] 2025-04-15 23:01:05,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 19:01:23] 2025-04-15 23:01:05,550 | INFO     | **************************************
[2025-04-15 19:01:23] 2025-04-15 23:01:05,551 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 19:01:23] 2025-04-15 23:01:05,551 | INFO     | **************************************
[2025-04-15 19:01:23] 2025-04-15 23:01:05,551 | INFO     | 
[2025-04-15 19:01:23] 2025-04-15 23:01:05,551 | INFO     | architecture information:
[2025-04-15 19:01:23] 2025-04-15 23:01:05,552 | INFO     | executing command: cat /etc/os-release
[2025-04-15 19:01:23] 2025-04-15 23:01:05,567 | INFO     | cat /etc/os-release:
[2025-04-15 19:01:23] NAME="CentOS Linux"
[2025-04-15 19:01:23] VERSION="7 (Core)"
[2025-04-15 19:01:23] ID="centos"
[2025-04-15 19:01:23] ID_LIKE="rhel fedora"
[2025-04-15 19:01:23] VERSION_ID="7"
[2025-04-15 19:01:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 19:01:23] ANSI_COLOR="0;31"
[2025-04-15 19:01:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 19:01:23] HOME_URL="https://www.centos.org/"
[2025-04-15 19:01:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 19:01:23] 
[2025-04-15 19:01:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 19:01:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 19:01:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 19:01:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 19:01:23] 
[2025-04-15 19:01:23] 2025-04-15 23:01:05,567 | INFO     | **************************************
[2025-04-15 19:01:23] 2025-04-15 23:01:06,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 19:01:23] 2025-04-15 23:01:06,087 | INFO     | sufficient remaining disk space (18611175424 B)
[2025-04-15 19:01:23] 2025-04-15 23:01:06,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 19:01:23] 2025-04-15 23:01:06,087 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 19:01:23] 2025-04-15 23:01:06,088 | INFO     | update_server=False
[2025-04-15 19:01:23] 2025-04-15 23:01:06,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 19:01:23] 2025-04-15 23:01:06,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 19:01:23] 2025-04-15 23:01:06,088 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 19:01:23] 2025-04-15 23:01:06,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 19:01:23] 2025-04-15 23:01:06,089 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 19:01:23] 2025-04-15 23:01:06,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 19:01:23] 2025-04-15 23:01:06,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 19:01:23] 2025-04-15 23:01:06,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 19:01:23] 2025-04-15 23:01:06,617 | INFO     | aborting loop
[2025-04-15 19:01:23] 2025-04-15 23:01:06,751 | INFO     | all payload control threads have been joined
[2025-04-15 19:01:23] 2025-04-15 23:01:07,042 | INFO     | all data control threads have been joined
[2025-04-15 19:01:23] 2025-04-15 23:01:07,093 | INFO     | [job] retrieve thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:07,094 | INFO     | [job] queue monitor thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:07,096 | INFO     | [data] copytool_in thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:07,541 | INFO     | [payload] validate_post thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:07,550 | INFO     | all job control threads have been joined
[2025-04-15 19:01:23] 2025-04-15 23:01:07,622 | INFO     | [job] job monitor thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:07,754 | INFO     | [payload] control thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:07,825 | INFO     | [payload] failed_post thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:08,048 | INFO     | [data] control thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:08,095 | INFO     | [data] copytool_out thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:08,296 | INFO     | [job] validate thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:08,375 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:08,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 19:01:23] 2025-04-15 23:01:08,455 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:08,555 | INFO     | [job] control thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:08,557 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:12,408 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:16,734 | INFO     | job.realtimelogging is not enabled
[2025-04-15 19:01:23] 2025-04-15 23:01:17,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 19:01:23] 2025-04-15 23:01:18,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223596173120)>', '<ExcThread(monitor, started 140222847227648)>']
[2025-04-15 19:01:23] 2025-04-15 23:01:19,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 19:01:23] 2025-04-15 23:01:19,156 | INFO     | [monitor] control thread has ended
[2025-04-15 19:01:23] 2025-04-15 23:01:23,293 | INFO     | all workflow threads have been joined
[2025-04-15 19:01:23] 2025-04-15 23:01:23,293 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 19:01:23] 2025-04-15 23:01:23,293 | INFO     | traces error code: 0
[2025-04-15 19:01:23] 2025-04-15 23:01:23,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 19:01:23] 2025-04-15 23:01:23,381 [wrapper] ==== pilot stdout END ====
[2025-04-15 19:01:23] 2025-04-15 23:01:23,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 19:01:23] 2025-04-15 23:01:23,387 [wrapper] pilotpid: 7464
[2025-04-15 19:01:23] 2025-04-15 23:01:23,391 [wrapper] Pilot exit status: 0
[2025-04-15 19:01:23] 2025-04-15 23:01:23,407 [wrapper] pandaids: 6603689931
[2025-04-15 19:01:23] 2025-04-15 23:01:23,444 [wrapper] cleanup supervisor_pilot 17329 7465
[2025-04-15 19:01:23] 2025-04-15 23:01:23,448 [wrapper] Test setup, not cleaning
[2025-04-15 19:01:23] 2025-04-15 23:01:23,452 [wrapper] apfmon messages muted
[2025-04-15 19:01:23] 2025-04-15 23:01:23,456 [wrapper] ==== wrapper stdout END ====
[2025-04-15 19:01:23] 2025-04-15 23:01:23,460 [wrapper] ==== wrapper stderr END ====
[2025-04-15 19:01:23]  *** Error codes and diagnostics ***
[2025-04-15 19:01:23]     "exeErrorCode": 0,
[2025-04-15 19:01:23]     "exeErrorDiag": "",
[2025-04-15 19:01:23]     "pilotErrorCode": 0,
[2025-04-15 19:01:23]     "pilotErrorDiag": "",
[2025-04-15 19:01:23]  *** Listing of results directory ***
[2025-04-15 19:01:23] total 424808
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 13:33 pilot3.tar.gz
[2025-04-15 19:01:23] -rwx------ 1 boincer umatlas     37140 Apr 15 13:53 runpilot2-wrapper.sh
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 13:53 queuedata.json
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas       100 Apr 15 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 19:01:23] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 17:41 run_atlas
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas       105 Apr 15 17:41 job.xml
[2025-04-15 19:01:23] -rw-r--r-- 2 boincer umatlas 225284421 Apr 15 17:41 EVNT.44075481._001196.pool.root.1
[2025-04-15 19:01:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 17:41 start_atlas.sh
[2025-04-15 19:01:23] drwxrwx--x 2 boincer umatlas      4096 Apr 15 17:41 shared
[2025-04-15 19:01:23] -rw-r--r-- 2 boincer umatlas    508896 Apr 15 17:41 input.tar.gz
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas         0 Apr 15 17:41 boinc_lockfile
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas      2579 Apr 15 17:41 pandaJob.out
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas       424 Apr 15 17:41 setup.sh.local
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas    985983 Apr 15 17:41 agis_schedconf.cvmfs.json
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas   1603529 Apr 15 17:41 agis_ddmendpoints.agis.ALL.json
[2025-04-15 19:01:23] drwx------ 4 boincer umatlas      4096 Apr 15 17:41 pilot3
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas      5868 Apr 15 18:54 init_data.xml
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas 204217176 Apr 15 19:00 HITS.44075483._030562.pool.root.1
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas       529 Apr 15 19:00 boinc_task_state.xml
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas        95 Apr 15 19:00 pilot_heartbeat.json
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas      1050 Apr 15 19:00 memory_monitor_summary.json
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas    374513 Apr 15 19:00 log.44075483._030562.job.log.tgz.1
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas      7753 Apr 15 19:01 heartbeat.json
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 19:01 boinc_mmap_file
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas        27 Apr 15 19:01 wrapper_checkpoint.txt
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas      4548 Apr 15 19:01 pilotlog.txt
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas    455625 Apr 15 19:01 log.44075483._030562.job.log.1
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas       357 Apr 15 19:01 output.list
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas       620 Apr 15 19:01 runtime_log
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas    849920 Apr 15 19:01 result.tar.gz
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas       658 Apr 15 19:01 UdOMDmEezO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmKdYLDmBN9n0m.diag
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas     11015 Apr 15 19:01 runtime_log.err
[2025-04-15 19:01:23] -rw-r--r-- 1 boincer umatlas     22437 Apr 15 19:01 stderr.txt
[2025-04-15 19:01:23] HITS file was successfully produced:
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas 204217176 Apr 15 19:00 shared/HITS.pool.root.1
[2025-04-15 19:01:23]  *** Contents of shared directory: ***
[2025-04-15 19:01:23] total 420792
[2025-04-15 19:01:23] -rw-r--r-- 2 boincer umatlas 225284421 Apr 15 17:41 ATLAS.root_0
[2025-04-15 19:01:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 17:41 start_atlas.sh
[2025-04-15 19:01:23] -rw-r--r-- 2 boincer umatlas    508896 Apr 15 17:41 input.tar.gz
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas 204217176 Apr 15 19:00 HITS.pool.root.1
[2025-04-15 19:01:23] -rw------- 1 boincer umatlas    849920 Apr 15 19:01 result.tar.gz
19:01:25 (3785): run_atlas exited; CPU time 43111.413296
19:01:25 (3785): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN