Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:22:14 (2366000): wrapper (7.7.26015): starting
04:22:14 (2366000): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 04:22:14] Arguments: --nthreads 12
[2025-04-16 04:22:14] Threads: 12
[2025-04-16 04:22:14] Checking for CVMFS
[2025-04-16 04:22:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 04:22:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 04:22:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 04:22:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 04:22:15] 2.12.7.0 2534634 15557 247280 144911 2 115 25331534 46080000 11604 130560 0 160172876 99.920 35932912 4437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-16 04:22:15] CVMFS is ok
[2025-04-16 04:22:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 04:22:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 04:22:15] Further information can be found at the LHC@home message board.
[2025-04-16 04:22:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 04:22:15] Checking for apptainer binary...
[2025-04-16 04:22:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 04:22:15] Running /usr/bin/apptainer --version
[2025-04-16 04:22:15] apptainer version 1.3.6-1.el9
[2025-04-16 04:22:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 04:22:15] mff2103.farm.particle.cz
[2025-04-16 04:22:15] apptainer works
[2025-04-16 04:22:15] Set ATHENA_PROC_NUMBER=12
[2025-04-16 04:22:15] Set ATHENA_CORE_NUMBER=12
[2025-04-16 04:22:15] Starting ATLAS job with PandaID=6603677645
[2025-04-16 04:22:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 05:29:13]  *** The last 200 lines of the pilot log: ***
[2025-04-16 05:29:13]  is_altstaged=None
[2025-04-16 05:29:13]  is_tar=False
[2025-04-16 05:29:13]  lfn=log.44075483._023783.job.log.tgz.1
[2025-04-16 05:29:13]  mtime=0
[2025-04-16 05:29:13]  protocol_id=None
[2025-04-16 05:29:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 05:29:13]  replicas=None
[2025-04-16 05:29:13]  scope=mc23_13p6TeV
[2025-04-16 05:29:13]  status=None
[2025-04-16 05:29:13]  status_code=0
[2025-04-16 05:29:13]  storage_token=
[2025-04-16 05:29:13]  surl=/scratch/.boinc/slots/4/PanDA_Pilot-6603677645/log.44075483._023783.job.log.tgz.1
[2025-04-16 05:29:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/64/log.44075483._023783.job.log.tgz.1
[2025-04-16 05:29:13]  workdir=None
[2025-04-16 05:29:13] ]
[2025-04-16 05:29:13] 2025-04-16 03:28:52,085 | INFO     | transferring file log.44075483._023783.job.log.tgz.1 from /scratch/.boinc/slots/4/PanDA_Pilot-6603677645/log.44075483._023783.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-16 05:29:13] 2025-04-16 03:28:52,086 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/4/PanDA_Pilot-6603677645/log.44075483._023783.job.log.tgz.1 /scratch/.boinc/slots/4/log.44075483._023783.j
[2025-04-16 05:29:13] 2025-04-16 03:28:52,114 | INFO     | adding to output.list: log.44075483._023783.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/64/log.44075483._023783.job.log.tg
[2025-04-16 05:29:13] 2025-04-16 03:28:52,116 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 05:29:13] 2025-04-16 03:28:52,116 | INFO     | summary of transferred files:
[2025-04-16 05:29:13] 2025-04-16 03:28:52,116 | INFO     |  -- lfn=log.44075483._023783.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 05:29:13] 2025-04-16 03:28:52,116 | INFO     | stage-out finished correctly
[2025-04-16 05:29:13] 2025-04-16 03:28:53,613 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 05:29:13] 2025-04-16 03:28:54,733 | INFO     | job 6603677645 has state=finished
[2025-04-16 05:29:13] 2025-04-16 03:28:54,733 | INFO     | preparing for final server update for job 6603677645 in state='finished'
[2025-04-16 05:29:13] 2025-04-16 03:28:54,734 | INFO     | this job has now completed (state=finished)
[2025-04-16 05:29:13] 2025-04-16 03:28:54,734 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 05:29:13] 2025-04-16 03:28:54,734 | INFO     | log transfer has been attempted: DONE
[2025-04-16 05:29:13] 2025-04-16 03:28:54,734 | INFO     | job 6603677645 has finished - writing final server update
[2025-04-16 05:29:13] 2025-04-16 03:28:54,735 | INFO     | total number of processed events: 400 (read)
[2025-04-16 05:29:13] 2025-04-16 03:28:54,741 | INFO     | executing command: lscpu
[2025-04-16 05:29:13] 2025-04-16 03:28:54,837 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 05:29:13] 2025-04-16 03:28:55,543 | WARNING  | process 2378952 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 05:29:13] 2025-04-16 03:28:55,543 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6603677645/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 05:29:13] 2025-04-16 03:28:55,958 | INFO     | number of running child processes to parent process 2378952: 1
[2025-04-16 05:29:13] 2025-04-16 03:28:55,958 | INFO     | maximum number of monitored processes: 6
[2025-04-16 05:29:13] 2025-04-16 03:28:58,462 | INFO     | monitor loop #286: job 0:6603677645 is in state 'finished'
[2025-04-16 05:29:13] 2025-04-16 03:28:58,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 05:29:13] 2025-04-16 03:28:59,890 | INFO     | PID=2371904 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-16 05:29:13] 2025-04-16 03:28:59,890 | INFO     | .. there are 14 such processes running
[2025-04-16 05:29:13] 2025-04-16 03:29:00,447 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-16 05:29:13] 2025-04-16 03:29:00,447 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6603677645/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 05:29:13] 2025-04-16 03:29:00,449 | INFO     | extracted standard info from prmon json
[2025-04-16 05:29:13] 2025-04-16 03:29:00,449 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 05:29:13] 2025-04-16 03:29:00,449 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 05:29:13] 2025-04-16 03:29:00,449 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 05:29:13] 2025-04-16 03:29:00,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 05:29:13] 2025-04-16 03:29:00,451 | INFO     | fitting pss+swap vs Time
[2025-04-16 05:29:13] 2025-04-16 03:29:00,451 | INFO     | sum of square deviations: 60482994.5
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | sum of deviations: 14670719020.5
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | mean x: 1744772224.5
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | mean y: 2576429.7413793104
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | -- intersect: -423208332223.47095
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | intersect: -423208332223.47095
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | chi2: 1.7176353961291078
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | -- intersect: -423208332223.47095
[2025-04-16 05:29:13] 2025-04-16 03:29:00,452 | INFO     | current memory leak: 242.56 B/s (using 58 data points, chi2=1.72)
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | ..............................
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . Timing measurements:
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . get job = 0 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . initial setup = 1 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . payload setup = 7 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . stage-in = 0 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . payload execution = 3955 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . stage-out = 0 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | . log creation = 0 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,453 | INFO     | ..............................
[2025-04-16 05:29:13] 2025-04-16 03:29:00,563 | INFO     | 
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | job summary report
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | --------------------------------------------------
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | PanDA job id: 6603677645
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | task id: 44075483
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | errors: (none)
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | pilot state: finished 
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | transexitcode: 0
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | exeerrorcode: 0
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | exeerrordiag: 
[2025-04-16 05:29:13] 2025-04-16 03:29:00,564 | INFO     | exitcode: 0
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | exitmsg: OK
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | cpuconsumptiontime: 35070 s
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | nevents: 400
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | neventsw: 0
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | pid: 2378952
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | pgrp: 2378952
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | corecount: 12
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | event service: False
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | sizes: {0: 2417363, 6: 2417569, 11: 2417597, 3965: 2443292, 3966: 2452235, 3968: 2452291, 3975: 2452589}
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | --------------------------------------------------
[2025-04-16 05:29:13] 2025-04-16 03:29:00,565 | INFO     | 
[2025-04-16 05:29:13] 2025-04-16 03:29:00,566 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2025-04-16 05:29:13] 2025-04-16 03:29:00,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 05:29:13] 2025-04-16 03:29:00,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,594 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 05:29:13] 2025-04-16 03:29:00,594 | INFO     | job 6603677645 has completed (purged errors)
[2025-04-16 05:29:13] 2025-04-16 03:29:00,594 | INFO     | overall cleanup function is called
[2025-04-16 05:29:13] 2025-04-16 03:29:01,603 | INFO     | --- collectZombieJob: --- 10, [2378952]
[2025-04-16 05:29:13] 2025-04-16 03:29:01,603 | INFO     | zombie collector waiting for pid 2378952
[2025-04-16 05:29:13] 2025-04-16 03:29:01,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 05:29:13] 2025-04-16 03:29:01,603 | INFO     | collected zombie processes
[2025-04-16 05:29:13] 2025-04-16 03:29:01,603 | INFO     | will attempt to kill all subprocesses of pid=2378952
[2025-04-16 05:29:13] 2025-04-16 03:29:02,000 | INFO     | process IDs to be killed: [2378952] (in reverse order)
[2025-04-16 05:29:13] 2025-04-16 03:29:02,128 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 05:29:13] 2025-04-16 03:29:02,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 05:29:13] 2025-04-16 03:29:02,142 | INFO     | did not find any defunct processes belonging to 2378952
[2025-04-16 05:29:13] 2025-04-16 03:29:02,153 | INFO     | did not find any defunct processes belonging to 2378952
[2025-04-16 05:29:13] 2025-04-16 03:29:02,154 | INFO     | ready for new job
[2025-04-16 05:29:13] 2025-04-16 03:29:02,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 05:29:13] 2025-04-16 03:29:02,155 | INFO     | **************************************
[2025-04-16 05:29:13] 2025-04-16 03:29:02,155 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 05:29:13] 2025-04-16 03:29:02,155 | INFO     | **************************************
[2025-04-16 05:29:13] 2025-04-16 03:29:02,156 | INFO     | 
[2025-04-16 05:29:13] 2025-04-16 03:29:02,162 | INFO     | architecture information:
[2025-04-16 05:29:13] 2025-04-16 03:29:02,162 | INFO     | executing command: cat /etc/os-release
[2025-04-16 05:29:13] 2025-04-16 03:29:02,186 | INFO     | cat /etc/os-release:
[2025-04-16 05:29:13] NAME="CentOS Linux"
[2025-04-16 05:29:13] VERSION="7 (Core)"
[2025-04-16 05:29:13] ID="centos"
[2025-04-16 05:29:13] ID_LIKE="rhel fedora"
[2025-04-16 05:29:13] VERSION_ID="7"
[2025-04-16 05:29:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 05:29:13] ANSI_COLOR="0;31"
[2025-04-16 05:29:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 05:29:13] HOME_URL="https://www.centos.org/"
[2025-04-16 05:29:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 05:29:13] 
[2025-04-16 05:29:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 05:29:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 05:29:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 05:29:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 05:29:13] 
[2025-04-16 05:29:13] 2025-04-16 03:29:02,187 | INFO     | **************************************
[2025-04-16 05:29:13] 2025-04-16 03:29:02,690 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2025-04-16 05:29:13] 2025-04-16 03:29:02,712 | INFO     | sufficient remaining disk space (1674556997632 B)
[2025-04-16 05:29:13] 2025-04-16 03:29:02,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 05:29:13] 2025-04-16 03:29:02,712 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 05:29:13] 2025-04-16 03:29:02,712 | INFO     | update_server=False
[2025-04-16 05:29:13] 2025-04-16 03:29:02,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 05:29:13] 2025-04-16 03:29:02,713 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 05:29:13] 2025-04-16 03:29:02,713 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 05:29:13] 2025-04-16 03:29:02,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 05:29:13] 2025-04-16 03:29:02,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 05:29:13] 2025-04-16 03:29:02,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 05:29:13] 2025-04-16 03:29:02,713 | INFO     | aborting loop
[2025-04-16 05:29:13] 2025-04-16 03:29:02,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 05:29:13] 2025-04-16 03:29:03,574 | INFO     | all data control threads have been joined
[2025-04-16 05:29:13] 2025-04-16 03:29:03,718 | INFO     | [job] retrieve thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:03,718 | INFO     | [job] job monitor thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:03,788 | INFO     | all job control threads have been joined
[2025-04-16 05:29:13] 2025-04-16 03:29:04,098 | INFO     | all payload control threads have been joined
[2025-04-16 05:29:13] 2025-04-16 03:29:04,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 05:29:13] 2025-04-16 03:29:04,249 | INFO     | [payload] failed_post thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:04,275 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:04,529 | INFO     | [job] validate thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:04,580 | INFO     | [data] control thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:04,736 | INFO     | [data] copytool_out thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:04,795 | INFO     | [job] control thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:04,856 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:05,031 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:05,084 | INFO     | [data] copytool_in thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:05,102 | INFO     | [payload] control thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:05,163 | INFO     | [payload] validate_post thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:05,176 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:05,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 05:29:13] 2025-04-16 03:29:06,563 | INFO     | [job] queue monitor thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:08,223 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 05:29:13] 2025-04-16 03:29:08,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046752876352)>', '<ExcThread(monitor, started 140045528856320)>']
[2025-04-16 05:29:13] 2025-04-16 03:29:08,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 05:29:13] 2025-04-16 03:29:08,744 | INFO     | [monitor] control thread has ended
[2025-04-16 05:29:13] 2025-04-16 03:29:13,382 | INFO     | all workflow threads have been joined
[2025-04-16 05:29:13] 2025-04-16 03:29:13,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 05:29:13] 2025-04-16 03:29:13,383 | INFO     | traces error code: 0
[2025-04-16 05:29:13] 2025-04-16 03:29:13,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 05:29:13] 2025-04-16 03:29:13,580 [wrapper] ==== pilot stdout END ====
[2025-04-16 05:29:13] 2025-04-16 03:29:13,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 05:29:13] 2025-04-16 03:29:13,588 [wrapper] pilotpid: 2371904
[2025-04-16 05:29:13] 2025-04-16 03:29:13,591 [wrapper] Pilot exit status: 0
[2025-04-16 05:29:13] 2025-04-16 03:29:13,605 [wrapper] pandaids: 6603677645
[2025-04-16 05:29:13] 2025-04-16 03:29:13,697 [wrapper] cleanup supervisor_pilot 2585969 2371905
[2025-04-16 05:29:13] 2025-04-16 03:29:13,701 [wrapper] Test setup, not cleaning
[2025-04-16 05:29:13] 2025-04-16 03:29:13,705 [wrapper] apfmon messages muted
[2025-04-16 05:29:13] 2025-04-16 03:29:13,709 [wrapper] ==== wrapper stdout END ====
[2025-04-16 05:29:13] 2025-04-16 03:29:13,713 [wrapper] ==== wrapper stderr END ====
[2025-04-16 05:29:13]  *** Error codes and diagnostics ***
[2025-04-16 05:29:13]     "exeErrorCode": 0,
[2025-04-16 05:29:13]     "exeErrorDiag": "",
[2025-04-16 05:29:13]     "pilotErrorCode": 0,
[2025-04-16 05:29:13]     "pilotErrorDiag": "",
[2025-04-16 05:29:13]  *** Listing of results directory ***
[2025-04-16 05:29:13] total 411324
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc    495897 Apr 15 05:57 pilot3.tar.gz
[2025-04-16 05:29:13] -rwx------ 1 boinc boinc     37140 Apr 15 06:12 runpilot2-wrapper.sh
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc      5111 Apr 15 06:12 queuedata.json
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc       100 Apr 16 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 05:29:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 04:22 run_atlas
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc       105 Apr 16 04:22 job.xml
[2025-04-16 05:29:13] -rw-r--r-- 2 boinc boinc 223282433 Apr 16 04:22 EVNT.44075481._000926.pool.root.1
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc      6654 Apr 16 04:22 init_data.xml
[2025-04-16 05:29:13] -rw-r--r-- 2 boinc boinc     17569 Apr 16 04:22 start_atlas.sh
[2025-04-16 05:29:13] drwxrwx--x 2 boinc boinc      4096 Apr 16 04:22 shared
[2025-04-16 05:29:13] -rw-r--r-- 2 boinc boinc    508888 Apr 16 04:22 input.tar.gz
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc         0 Apr 16 04:22 boinc_lockfile
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc      2577 Apr 16 04:22 pandaJob.out
[2025-04-16 05:29:13] -rw------- 1 boinc boinc       424 Apr 16 04:22 setup.sh.local
[2025-04-16 05:29:13] -rw------- 1 boinc boinc    986044 Apr 16 04:22 agis_schedconf.cvmfs.json
[2025-04-16 05:29:13] -rw------- 1 boinc boinc   1603529 Apr 16 04:22 agis_ddmendpoints.agis.ALL.json
[2025-04-16 05:29:13] drwx------ 4 boinc boinc      4096 Apr 16 04:22 pilot3
[2025-04-16 05:29:13] -rw------- 1 boinc boinc 192595135 Apr 16 05:28 HITS.44075483._023783.pool.root.1
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc       530 Apr 16 05:28 boinc_task_state.xml
[2025-04-16 05:29:13] -rw------- 1 boinc boinc        95 Apr 16 05:28 pilot_heartbeat.json
[2025-04-16 05:29:13] -rw------- 1 boinc boinc      1022 Apr 16 05:28 memory_monitor_summary.json
[2025-04-16 05:29:13] -rw------- 1 boinc boinc    342379 Apr 16 05:28 log.44075483._023783.job.log.tgz.1
[2025-04-16 05:29:13] -rw------- 1 boinc boinc      7695 Apr 16 05:29 heartbeat.json
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc      8192 Apr 16 05:29 boinc_mmap_file
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc        27 Apr 16 05:29 wrapper_checkpoint.txt
[2025-04-16 05:29:13] -rw------- 1 boinc boinc      4479 Apr 16 05:29 pilotlog.txt
[2025-04-16 05:29:13] -rw------- 1 boinc boinc    396162 Apr 16 05:29 log.44075483._023783.job.log.1
[2025-04-16 05:29:13] -rw------- 1 boinc boinc       357 Apr 16 05:29 output.list
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc       620 Apr 16 05:29 runtime_log
[2025-04-16 05:29:13] -rw------- 1 boinc boinc    757760 Apr 16 05:29 result.tar.gz
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc     11078 Apr 16 05:29 runtime_log.err
[2025-04-16 05:29:13] -rw------- 1 boinc boinc       662 Apr 16 05:29 nPjNDmkpmO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPWXLDmJgacjn.diag
[2025-04-16 05:29:13] -rw-r--r-- 1 boinc boinc     21553 Apr 16 05:29 stderr.txt
[2025-04-16 05:29:13] HITS file was successfully produced:
[2025-04-16 05:29:13] -rw------- 1 boinc boinc 192595135 Apr 16 05:28 shared/HITS.pool.root.1
[2025-04-16 05:29:13]  *** Contents of shared directory: ***
[2025-04-16 05:29:13] total 407400
[2025-04-16 05:29:13] -rw-r--r-- 2 boinc boinc 223282433 Apr 16 04:22 ATLAS.root_0
[2025-04-16 05:29:13] -rw-r--r-- 2 boinc boinc     17569 Apr 16 04:22 start_atlas.sh
[2025-04-16 05:29:13] -rw-r--r-- 2 boinc boinc    508888 Apr 16 04:22 input.tar.gz
[2025-04-16 05:29:13] -rw------- 1 boinc boinc 192595135 Apr 16 05:28 HITS.pool.root.1
[2025-04-16 05:29:13] -rw------- 1 boinc boinc    757760 Apr 16 05:29 result.tar.gz
05:29:15 (2366000): run_atlas exited; CPU time 35171.379654
05:29:15 (2366000): called boinc_finish(0)

</stderr_txt>
]]>

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