Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:11:20 (2601156): wrapper (7.7.26015): starting
06:11:20 (2601156): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 06:11:20] Arguments: --nthreads 12
[2025-04-16 06:11:20] Threads: 12
[2025-04-16 06:11:20] Checking for CVMFS
[2025-04-16 06:11:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 06:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 06:11:22] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 06:13:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 06:13:15] 2.12.7.0 2655462 7142 226948 144913 3 574 30892554 46080000 53052 130560 0 69948943 99.881 25652841 15140 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-16 06:13:15] CVMFS is ok
[2025-04-16 06:13:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 06:13:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 06:13:15] Further information can be found at the LHC@home message board.
[2025-04-16 06:13:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 06:13:15] Checking for apptainer binary...
[2025-04-16 06:13:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 06:13:15] Running /usr/bin/apptainer --version
[2025-04-16 06:13:15] apptainer version 1.3.6-1.el9
[2025-04-16 06:13:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 06:13:16] mff2101.farm.particle.cz
[2025-04-16 06:13:16] apptainer works
[2025-04-16 06:13:16] Set ATHENA_PROC_NUMBER=12
[2025-04-16 06:13:16] Set ATHENA_CORE_NUMBER=12
[2025-04-16 06:13:16] Starting ATLAS job with PandaID=6603684828
[2025-04-16 06:13:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 08:37:12]  *** The last 200 lines of the pilot log: ***
[2025-04-16 08:37:12] 2025-04-16 06:36:33,127 | INFO     | mean x: 1744781211.5
[2025-04-16 08:37:12] 2025-04-16 06:36:33,127 | INFO     | mean y: 2463537.742647059
[2025-04-16 08:37:12] 2025-04-16 06:36:33,128 | INFO     | -- intersect: -218960122233.27594
[2025-04-16 08:37:12] 2025-04-16 06:36:33,128 | INFO     | intersect: -218960122233.27594
[2025-04-16 08:37:12] 2025-04-16 06:36:33,128 | INFO     | chi2: 7.921898613113095
[2025-04-16 08:37:12] 2025-04-16 06:36:33,128 | INFO     | sum of square deviations: 697054930.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,129 | INFO     | sum of deviations: 102852127450.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,129 | INFO     | mean x: 1744781059.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,129 | INFO     | mean y: 2472176.2061068704
[2025-04-16 08:37:12] 2025-04-16 06:36:33,129 | INFO     | -- intersect: -257444159544.2151
[2025-04-16 08:37:12] 2025-04-16 06:36:33,129 | INFO     | intersect: -257444159544.2151
[2025-04-16 08:37:12] 2025-04-16 06:36:33,129 | INFO     | chi2: 7.188769891298724
[2025-04-16 08:37:12] 2025-04-16 06:36:33,129 | INFO     | current chi2=7.188769891298724 (change=9.25445726610064 %)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,130 | INFO     | right removable region: 130
[2025-04-16 08:37:12] 2025-04-16 06:36:33,130 | INFO     | sum of square deviations: 697054930.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,130 | INFO     | sum of deviations: 54384423791.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,130 | INFO     | mean x: 1744781364.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,131 | INFO     | mean y: 2543370.6641221372
[2025-04-16 08:37:12] 2025-04-16 06:36:33,131 | INFO     | -- intersect: -136125794639.10368
[2025-04-16 08:37:12] 2025-04-16 06:36:33,131 | INFO     | intersect: -136125794639.10368
[2025-04-16 08:37:12] 2025-04-16 06:36:33,131 | INFO     | chi2: 3.8182776383028623
[2025-04-16 08:37:12] 2025-04-16 06:36:33,131 | INFO     | current chi2=3.8182776383028623 (change=51.800978215216254 %)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,131 | INFO     | sum of square deviations: 620244187.5
[2025-04-16 08:37:12] 2025-04-16 06:36:33,132 | INFO     | sum of deviations: 24300784476.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,132 | INFO     | mean x: 1744781516.5
[2025-04-16 08:37:12] 2025-04-16 06:36:33,132 | INFO     | mean y: 2603078.873015873
[2025-04-16 08:37:12] 2025-04-16 06:36:33,132 | INFO     | -- intersect: -68356859927.259445
[2025-04-16 08:37:12] 2025-04-16 06:36:33,132 | INFO     | intersect: -68356859927.259445
[2025-04-16 08:37:12] 2025-04-16 06:36:33,132 | INFO     | chi2: 2.067013143291933
[2025-04-16 08:37:12] 2025-04-16 06:36:33,132 | INFO     | current chi2=2.067013143291933 (change=45.86530003589069 %)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,133 | INFO     | sum of square deviations: 549294020.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,133 | INFO     | sum of deviations: 1155104905.999999
[2025-04-16 08:37:12] 2025-04-16 06:36:33,133 | INFO     | mean x: 1744781669.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,133 | INFO     | mean y: 2652534.2314049588
[2025-04-16 08:37:12] 2025-04-16 06:36:33,141 | INFO     | -- intersect: -3666431403.2940145
[2025-04-16 08:37:12] 2025-04-16 06:36:33,141 | INFO     | intersect: -3666431403.2940145
[2025-04-16 08:37:12] 2025-04-16 06:36:33,141 | INFO     | chi2: 0.9102010106814153
[2025-04-16 08:37:12] 2025-04-16 06:36:33,141 | INFO     | current chi2=0.9102010106814153 (change=55.9653980123307 %)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,141 | INFO     | sum of square deviations: 483971865.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,142 | INFO     | sum of deviations: -7026375646.0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,142 | INFO     | mean x: 1744781821.5
[2025-04-16 08:37:12] 2025-04-16 06:36:33,142 | INFO     | mean y: 2671621.2586206896
[2025-04-16 08:37:12] 2025-04-16 06:36:33,142 | INFO     | -- intersect: 25333674071.517002
[2025-04-16 08:37:12] 2025-04-16 06:36:33,142 | INFO     | intersect: 25333674071.517002
[2025-04-16 08:37:12] 2025-04-16 06:36:33,142 | INFO     | chi2: 0.7677584005798054
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | current chi2=0.7677584005798054 (change=15.64957722854772 %)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | left removable region: 40
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | sum of square deviations: 226022842.5
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | sum of deviations: -345367695.5
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | mean x: 1744782248.5
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | mean y: 2693636.188888889
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | -- intersect: 2668757904.9530225
[2025-04-16 08:37:12] 2025-04-16 06:36:33,143 | INFO     | intersect: 2668757904.9530225
[2025-04-16 08:37:12] 2025-04-16 06:36:33,144 | INFO     | chi2: 0.0019613602894056137
[2025-04-16 08:37:12] 2025-04-16 06:36:33,144 | INFO     | -- intersect: 2668757904.9530225
[2025-04-16 08:37:12] 2025-04-16 06:36:33,144 | INFO     | current memory leak: -1.53 B/s (using 90 data points, chi2=0.00)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,144 | INFO     | ..............................
[2025-04-16 08:37:12] 2025-04-16 06:36:33,144 | INFO     | . Timing measurements:
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | . get job = 0 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | . initial setup = 5 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | . payload setup = 56 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | . stage-in = 0 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | . payload execution = 8293 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | . stage-out = 2 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | . log creation = 0 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,145 | INFO     | ..............................
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | 
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | job summary report
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | --------------------------------------------------
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | PanDA job id: 6603684828
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | task id: 44075483
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | errors: (none)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 08:37:12] 2025-04-16 06:36:33,305 | INFO     | pilot state: finished 
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | transexitcode: 0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | exeerrorcode: 0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | exeerrordiag: 
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | exitcode: 0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | exitmsg: OK
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | cpuconsumptiontime: 39321 s
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | nevents: 400
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | neventsw: 0
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | pid: 2698923
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | pgrp: 2698923
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | corecount: 12
[2025-04-16 08:37:12] 2025-04-16 06:36:33,306 | INFO     | event service: False
[2025-04-16 08:37:12] 2025-04-16 06:36:33,307 | INFO     | sizes: {0: 2417145, 1: 2417344, 12: 2417344, 23: 2417372, 34: 2417400, 44: 2417428, 46: 2417790, 55: 2417818, 8354: 2445507, 8358: 2454450, 8359: 2454506, 8404: 24
[2025-04-16 08:37:12] 2025-04-16 06:36:33,307 | INFO     | --------------------------------------------------
[2025-04-16 08:37:12] 2025-04-16 06:36:33,307 | INFO     | 
[2025-04-16 08:37:12] 2025-04-16 06:36:33,307 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2025-04-16 08:37:12] 2025-04-16 06:36:33,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,506 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 08:37:12] 2025-04-16 06:36:33,507 | INFO     | job 6603684828 has completed (purged errors)
[2025-04-16 08:37:12] 2025-04-16 06:36:33,507 | INFO     | overall cleanup function is called
[2025-04-16 08:37:12] 2025-04-16 06:36:33,585 | INFO     | PID=2649368 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-16 08:37:12] 2025-04-16 06:36:33,586 | INFO     | .. there are 102 such processes running
[2025-04-16 08:37:12] 2025-04-16 06:36:34,550 | INFO     | --- collectZombieJob: --- 10, [2698923]
[2025-04-16 08:37:12] 2025-04-16 06:36:34,552 | INFO     | zombie collector waiting for pid 2698923
[2025-04-16 08:37:12] 2025-04-16 06:36:34,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 08:37:12] 2025-04-16 06:36:34,553 | INFO     | collected zombie processes
[2025-04-16 08:37:12] 2025-04-16 06:36:34,553 | INFO     | will attempt to kill all subprocesses of pid=2698923
[2025-04-16 08:37:12] 2025-04-16 06:36:35,763 | INFO     | process IDs to be killed: [2698923] (in reverse order)
[2025-04-16 08:37:12] 2025-04-16 06:36:36,314 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 08:37:12] 2025-04-16 06:36:36,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 08:37:12] 2025-04-16 06:36:36,353 | INFO     | did not find any defunct processes belonging to 2698923
[2025-04-16 08:37:12] 2025-04-16 06:36:36,393 | INFO     | did not find any defunct processes belonging to 2698923
[2025-04-16 08:37:12] 2025-04-16 06:36:36,393 | INFO     | ready for new job
[2025-04-16 08:37:12] 2025-04-16 06:36:36,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 08:37:12] 2025-04-16 06:36:36,395 | INFO     | **************************************
[2025-04-16 08:37:12] 2025-04-16 06:36:36,396 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 08:37:12] 2025-04-16 06:36:36,396 | INFO     | **************************************
[2025-04-16 08:37:12] 2025-04-16 06:36:36,396 | INFO     | 
[2025-04-16 08:37:12] 2025-04-16 06:36:36,402 | INFO     | architecture information:
[2025-04-16 08:37:12] 2025-04-16 06:36:36,403 | INFO     | executing command: cat /etc/os-release
[2025-04-16 08:37:12] 2025-04-16 06:36:36,508 | INFO     | cat /etc/os-release:
[2025-04-16 08:37:12] NAME="CentOS Linux"
[2025-04-16 08:37:12] VERSION="7 (Core)"
[2025-04-16 08:37:12] ID="centos"
[2025-04-16 08:37:12] ID_LIKE="rhel fedora"
[2025-04-16 08:37:12] VERSION_ID="7"
[2025-04-16 08:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 08:37:12] ANSI_COLOR="0;31"
[2025-04-16 08:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 08:37:12] HOME_URL="https://www.centos.org/"
[2025-04-16 08:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 08:37:12] 
[2025-04-16 08:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 08:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 08:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 08:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 08:37:12] 
[2025-04-16 08:37:12] 2025-04-16 06:36:36,508 | INFO     | **************************************
[2025-04-16 08:37:12] 2025-04-16 06:36:37,013 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2025-04-16 08:37:12] 2025-04-16 06:36:37,079 | INFO     | sufficient remaining disk space (1609471885312 B)
[2025-04-16 08:37:12] 2025-04-16 06:36:37,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 08:37:12] 2025-04-16 06:36:37,079 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 08:37:12] 2025-04-16 06:36:37,079 | INFO     | update_server=False
[2025-04-16 08:37:12] 2025-04-16 06:36:37,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 08:37:12] 2025-04-16 06:36:37,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 08:37:12] 2025-04-16 06:36:37,080 | INFO     | aborting loop
[2025-04-16 08:37:12] 2025-04-16 06:36:37,230 | INFO     | all data control threads have been joined
[2025-04-16 08:37:12] 2025-04-16 06:36:37,544 | INFO     | all payload control threads have been joined
[2025-04-16 08:37:12] 2025-04-16 06:36:37,616 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 08:37:12] 2025-04-16 06:36:37,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 08:37:12] 2025-04-16 06:36:37,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 08:37:12] 2025-04-16 06:36:38,086 | INFO     | [job] retrieve thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:38,086 | INFO     | [job] job monitor thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:38,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 08:37:12] 2025-04-16 06:36:38,240 | INFO     | [data] control thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:38,245 | INFO     | all job control threads have been joined
[2025-04-16 08:37:12] 2025-04-16 06:36:38,277 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:38,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 08:37:12] 2025-04-16 06:36:38,364 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:38,551 | INFO     | [payload] control thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:38,706 | INFO     | [data] copytool_in thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:38,899 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:39,118 | INFO     | [payload] failed_post thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:39,251 | INFO     | [job] control thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:39,305 | INFO     | [payload] validate_post thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:39,334 | INFO     | [job] queue monitor thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:39,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:39,488 | INFO     | [job] validate thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:40,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 08:37:12] 2025-04-16 06:36:40,188 | INFO     | [data] copytool_out thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:44,040 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 08:37:12] 2025-04-16 06:36:44,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707825043264)>', '<ExcThread(monitor, started 140707331294976)>']
[2025-04-16 08:37:12] 2025-04-16 06:36:45,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 08:37:12] 2025-04-16 06:36:45,664 | INFO     | [monitor] control thread has ended
[2025-04-16 08:37:12] 2025-04-16 06:36:49,720 | INFO     | all workflow threads have been joined
[2025-04-16 08:37:12] 2025-04-16 06:36:49,721 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 08:37:12] 2025-04-16 06:36:49,721 | INFO     | traces error code: 0
[2025-04-16 08:37:12] 2025-04-16 06:36:49,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 08:37:12] 2025-04-16 06:36:50,096 [wrapper] ==== pilot stdout END ====
[2025-04-16 08:37:12] 2025-04-16 06:36:50,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 08:37:12] 2025-04-16 06:36:50,176 [wrapper] pilotpid: 2649368
[2025-04-16 08:37:12] 2025-04-16 06:36:50,220 [wrapper] Pilot exit status: 0
[2025-04-16 08:37:12] 2025-04-16 06:36:50,394 [wrapper] pandaids: 6603684828
[2025-04-16 08:37:12] 2025-04-16 06:36:50,665 [wrapper] cleanup supervisor_pilot 4025953 2649369
[2025-04-16 08:37:12] 2025-04-16 06:36:50,700 [wrapper] Test setup, not cleaning
[2025-04-16 08:37:12] 2025-04-16 06:36:50,734 [wrapper] apfmon messages muted
[2025-04-16 08:37:12] 2025-04-16 06:36:50,768 [wrapper] ==== wrapper stdout END ====
[2025-04-16 08:37:12] 2025-04-16 06:36:50,815 [wrapper] ==== wrapper stderr END ====
[2025-04-16 08:37:12]  *** Error codes and diagnostics ***
[2025-04-16 08:37:12]     "exeErrorCode": 0,
[2025-04-16 08:37:12]     "exeErrorDiag": "",
[2025-04-16 08:37:12]     "pilotErrorCode": 0,
[2025-04-16 08:37:12]     "pilotErrorDiag": "",
[2025-04-16 08:37:12]  *** Listing of results directory ***
[2025-04-16 08:37:12] total 418492
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc    495897 Apr 15 13:03 pilot3.tar.gz
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc      5111 Apr 15 13:19 queuedata.json
[2025-04-16 08:37:12] -rwx------ 1 boinc boinc     37140 Apr 15 13:21 runpilot2-wrapper.sh
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc       100 Apr 16 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 08:37:12] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 06:11 run_atlas
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc       105 Apr 16 06:11 job.xml
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc      6654 Apr 16 06:11 init_data.xml
[2025-04-16 08:37:12] -rw-r--r-- 2 boinc boinc 227959657 Apr 16 06:11 EVNT.44075481._001067.pool.root.1
[2025-04-16 08:37:12] drwxrwx--x 2 boinc boinc      4096 Apr 16 06:11 shared
[2025-04-16 08:37:12] -rw-r--r-- 2 boinc boinc    508890 Apr 16 06:11 input.tar.gz
[2025-04-16 08:37:12] -rw-r--r-- 2 boinc boinc     17569 Apr 16 06:11 start_atlas.sh
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc         0 Apr 16 06:11 boinc_lockfile
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc      2578 Apr 16 06:13 pandaJob.out
[2025-04-16 08:37:12] -rw------- 1 boinc boinc       424 Apr 16 06:13 setup.sh.local
[2025-04-16 08:37:12] -rw------- 1 boinc boinc    986044 Apr 16 06:14 agis_schedconf.cvmfs.json
[2025-04-16 08:37:12] -rw------- 1 boinc boinc   1603529 Apr 16 06:14 agis_ddmendpoints.agis.ALL.json
[2025-04-16 08:37:12] drwx------ 4 boinc boinc      4096 Apr 16 06:14 pilot3
[2025-04-16 08:37:12] -rw------- 1 boinc boinc 194471765 Apr 16 08:34 HITS.44075483._027323.pool.root.1
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc       529 Apr 16 08:34 boinc_task_state.xml
[2025-04-16 08:37:12] -rw------- 1 boinc boinc      1024 Apr 16 08:35 memory_monitor_summary.json
[2025-04-16 08:37:12] -rw------- 1 boinc boinc    397255 Apr 16 08:35 log.44075483._027323.job.log.tgz.1
[2025-04-16 08:37:12] -rw------- 1 boinc boinc        95 Apr 16 08:36 pilot_heartbeat.json
[2025-04-16 08:37:12] -rw------- 1 boinc boinc      7695 Apr 16 08:36 heartbeat.json
[2025-04-16 08:37:12] -rw------- 1 boinc boinc      4356 Apr 16 08:36 pilotlog.txt
[2025-04-16 08:37:12] -rw------- 1 boinc boinc    735028 Apr 16 08:36 log.44075483._027323.job.log.1
[2025-04-16 08:37:12] -rw------- 1 boinc boinc       357 Apr 16 08:36 output.list
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc       620 Apr 16 08:36 runtime_log
[2025-04-16 08:37:12] -rw------- 1 boinc boinc   1146880 Apr 16 08:36 result.tar.gz
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc     11078 Apr 16 08:36 runtime_log.err
[2025-04-16 08:37:12] -rw------- 1 boinc boinc       663 Apr 16 08:36 gPnNDm1WtO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDma3XLDmDPNoPn.diag
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc        26 Apr 16 08:37 wrapper_checkpoint.txt
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc      8192 Apr 16 08:37 boinc_mmap_file
[2025-04-16 08:37:12] -rw-r--r-- 1 boinc boinc     20895 Apr 16 08:37 stderr.txt
[2025-04-16 08:37:12] HITS file was successfully produced:
[2025-04-16 08:37:12] -rw------- 1 boinc boinc 194471765 Apr 16 08:34 shared/HITS.pool.root.1
[2025-04-16 08:37:12]  *** Contents of shared directory: ***
[2025-04-16 08:37:12] total 414184
[2025-04-16 08:37:12] -rw-r--r-- 2 boinc boinc 227959657 Apr 16 06:11 ATLAS.root_0
[2025-04-16 08:37:12] -rw-r--r-- 2 boinc boinc    508890 Apr 16 06:11 input.tar.gz
[2025-04-16 08:37:12] -rw-r--r-- 2 boinc boinc     17569 Apr 16 06:11 start_atlas.sh
[2025-04-16 08:37:12] -rw------- 1 boinc boinc 194471765 Apr 16 08:34 HITS.pool.root.1
[2025-04-16 08:37:12] -rw------- 1 boinc boinc   1146880 Apr 16 08:36 result.tar.gz
08:37:14 (2601156): run_atlas exited; CPU time 39883.975609
08:37:14 (2601156): called boinc_finish(0)

</stderr_txt>
]]>

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