Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
21:25:59 (1503930): wrapper (7.7.26015): starting
21:25:59 (1503930): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 21:25:59] Arguments: --nthreads 12
[2025-04-16 21:25:59] Threads: 12
[2025-04-16 21:25:59] Checking for CVMFS
[2025-04-16 21:26:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 21:26:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 21:26:00] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 21:26:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 21:26:00] 2.12.7.0 760753 1107 55968 144924 3 186 2992199 4096000 804 130560 0 2041517 99.872 546556 620 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-16 21:26:00] CVMFS is ok
[2025-04-16 21:26:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 21:26:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-16 21:26:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-16 21:26:00] Further information can be found at the LHC@home message board.
[2025-04-16 21:26:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 21:26:00] Checking for apptainer binary...
[2025-04-16 21:26:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 21:26:00] Running /usr/bin/apptainer --version
[2025-04-16 21:26:00] apptainer version 1.3.4
[2025-04-16 21:26:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 21:26:00] zero3-MS-7D76
[2025-04-16 21:26:00] apptainer works
[2025-04-16 21:26:00] Set ATHENA_PROC_NUMBER=12
[2025-04-16 21:26:00] Set ATHENA_CORE_NUMBER=12
[2025-04-16 21:26:00] Starting ATLAS job with PandaID=6603683969
[2025-04-16 21:26:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 22:01:54]  *** The last 200 lines of the pilot log: ***
[2025-04-16 22:01:54]  status=None
[2025-04-16 22:01:54]  status_code=0
[2025-04-16 22:01:54]  storage_token=
[2025-04-16 22:01:54]  surl=/var/lib/boinc/slots/15/PanDA_Pilot-6603683969/log.44075483._026609.job.log.tgz.1
[2025-04-16 22:01:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/6e/log.44075483._026609.job.log.tgz.1
[2025-04-16 22:01:54]  workdir=None
[2025-04-16 22:01:54] ]
[2025-04-16 22:01:54] 2025-04-16 13:01:30,727 | INFO     | transferring file log.44075483._026609.job.log.tgz.1 from /var/lib/boinc/slots/15/PanDA_Pilot-6603683969/log.44075483._026609.job.log.tgz.1 to /var/lib/boinc/slots
[2025-04-16 22:01:54] 2025-04-16 13:01:30,727 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/15/PanDA_Pilot-6603683969/log.44075483._026609.job.log.tgz.1 /var/lib/boinc/slots/15/log.44075483._026609.j
[2025-04-16 22:01:54] 2025-04-16 13:01:30,738 | INFO     | adding to output.list: log.44075483._026609.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/6e/log.44075483._026609.job.log.tg
[2025-04-16 22:01:54] 2025-04-16 13:01:30,739 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 22:01:54] 2025-04-16 13:01:30,739 | INFO     | summary of transferred files:
[2025-04-16 22:01:54] 2025-04-16 13:01:30,739 | INFO     |  -- lfn=log.44075483._026609.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 22:01:54] 2025-04-16 13:01:30,739 | INFO     | stage-out finished correctly
[2025-04-16 22:01:54] 2025-04-16 13:01:30,761 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 22:01:54] 2025-04-16 13:01:32,376 | INFO     | job 6603683969 has state=finished
[2025-04-16 22:01:54] 2025-04-16 13:01:32,377 | INFO     | preparing for final server update for job 6603683969 in state='finished'
[2025-04-16 22:01:54] 2025-04-16 13:01:32,377 | INFO     | this job has now completed (state=finished)
[2025-04-16 22:01:54] 2025-04-16 13:01:32,377 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 22:01:54] 2025-04-16 13:01:32,377 | INFO     | log transfer has been attempted: DONE
[2025-04-16 22:01:54] 2025-04-16 13:01:32,377 | INFO     | job 6603683969 has finished - writing final server update
[2025-04-16 22:01:54] 2025-04-16 13:01:32,378 | INFO     | total number of processed events: 400 (read)
[2025-04-16 22:01:54] 2025-04-16 13:01:32,385 | INFO     | executing command: lscpu
[2025-04-16 22:01:54] 2025-04-16 13:01:32,400 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 22:01:54] 2025-04-16 13:01:34,001 | WARNING  | process 1514292 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 22:01:54] 2025-04-16 13:01:34,002 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6603683969/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,002 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6603683969/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,002 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4680154 B
[2025-04-16 22:01:54] 2025-04-16 13:01:34,002 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15787 B
[2025-04-16 22:01:54] 2025-04-16 13:01:34,002 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-04-16 22:01:54] 2025-04-16 13:01:34,467 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-16 22:01:54] 2025-04-16 13:01:34,467 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6603683969/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,467 | INFO     | extracted standard info from prmon json
[2025-04-16 22:01:54] 2025-04-16 13:01:34,467 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 22:01:54] 2025-04-16 13:01:34,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 22:01:54] 2025-04-16 13:01:34,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 22:01:54] 2025-04-16 13:01:34,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 22:01:54] 2025-04-16 13:01:34,472 | INFO     | fitting pss+swap vs Time
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | sum of square deviations: 6798267.0
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | sum of deviations: 9195933732.0
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | mean x: 1744807510.5
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | mean y: 2391718.9285714286
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | -- intersect: -2360177672061.134
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | intersect: -2360177672061.134
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | chi2: 1.0971375890101924
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | -- intersect: -2360177672061.134
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | current memory leak: 1352.69 B/s (using 28 data points, chi2=1.10)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | ..............................
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . Timing measurements:
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . get job = 0 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . initial setup = 5 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . payload setup = 1 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . stage-in = 0 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . payload execution = 2106 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . stage-out = 0 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | . log creation = 0 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,473 | INFO     | ..............................
[2025-04-16 22:01:54] 2025-04-16 13:01:34,498 | INFO     | sufficient remaining disk space (958850400256 B)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,498 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,498 | INFO     | size of work directory /var/lib/boinc/slots/15/PanDA_Pilot-6603683969: 4960371 B (within 2537553920 B limit)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,498 | INFO     | pfn file=/var/lib/boinc/slots/15/PanDA_Pilot-6603683969/HITS.44075483._026609.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,498 | INFO     | total size of present files: 0 B (workdir size: 4960371 B)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,498 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/15/PanDA_Pilot-6603683969/HITS.44075483._026609.pool.root.1 since it does not exist
[2025-04-16 22:01:54] 2025-04-16 13:01:34,521 | INFO     | number of running child processes to parent process 1514292: 1
[2025-04-16 22:01:54] 2025-04-16 13:01:34,521 | INFO     | maximum number of monitored processes: 6
[2025-04-16 22:01:54] 2025-04-16 13:01:34,521 | INFO     | aborting job monitoring since job object (job id=6603683969) has expired
[2025-04-16 22:01:54] 2025-04-16 13:01:34,665 | INFO     | 
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | job summary report
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | --------------------------------------------------
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | PanDA job id: 6603683969
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | task id: 44075483
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | errors: (none)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | pilot state: finished 
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | transexitcode: 0
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | exeerrorcode: 0
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | exeerrordiag: 
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | exitcode: 0
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | exitmsg: OK
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | cpuconsumptiontime: 14252 s
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | nevents: 400
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | neventsw: 0
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | pid: 1514292
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | pgrp: 1514292
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | corecount: 12
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | event service: False
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | sizes: {0: 2417316, 1: 2417522, 11: 2417550, 2110: 2442566, 2111: 2451564, 2115: 2451678}
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | --------------------------------------------------
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | 
[2025-04-16 22:01:54] 2025-04-16 13:01:34,666 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-04-16 22:01:54] 2025-04-16 13:01:34,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | job 6603683969 has completed (purged errors)
[2025-04-16 22:01:54] 2025-04-16 13:01:34,700 | INFO     | overall cleanup function is called
[2025-04-16 22:01:54] 2025-04-16 13:01:35,707 | INFO     | --- collectZombieJob: --- 10, [1514292]
[2025-04-16 22:01:54] 2025-04-16 13:01:35,707 | INFO     | zombie collector waiting for pid 1514292
[2025-04-16 22:01:54] 2025-04-16 13:01:35,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 22:01:54] 2025-04-16 13:01:35,707 | INFO     | collected zombie processes
[2025-04-16 22:01:54] 2025-04-16 13:01:35,707 | INFO     | will attempt to kill all subprocesses of pid=1514292
[2025-04-16 22:01:54] 2025-04-16 13:01:35,737 | INFO     | process IDs to be killed: [1514292] (in reverse order)
[2025-04-16 22:01:54] 2025-04-16 13:01:35,769 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 22:01:54] 2025-04-16 13:01:35,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 22:01:54] 2025-04-16 13:01:35,771 | INFO     | did not find any defunct processes belonging to 1514292
[2025-04-16 22:01:54] 2025-04-16 13:01:35,773 | INFO     | did not find any defunct processes belonging to 1514292
[2025-04-16 22:01:54] 2025-04-16 13:01:35,773 | INFO     | ready for new job
[2025-04-16 22:01:54] 2025-04-16 13:01:35,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 22:01:54] 2025-04-16 13:01:35,774 | INFO     | **************************************
[2025-04-16 22:01:54] 2025-04-16 13:01:35,774 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 22:01:54] 2025-04-16 13:01:35,774 | INFO     | **************************************
[2025-04-16 22:01:54] 2025-04-16 13:01:35,774 | INFO     | 
[2025-04-16 22:01:54] 2025-04-16 13:01:35,775 | INFO     | architecture information:
[2025-04-16 22:01:54] 2025-04-16 13:01:35,775 | INFO     | executing command: cat /etc/os-release
[2025-04-16 22:01:54] 2025-04-16 13:01:35,784 | INFO     | cat /etc/os-release:
[2025-04-16 22:01:54] NAME="CentOS Linux"
[2025-04-16 22:01:54] VERSION="7 (Core)"
[2025-04-16 22:01:54] ID="centos"
[2025-04-16 22:01:54] ID_LIKE="rhel fedora"
[2025-04-16 22:01:54] VERSION_ID="7"
[2025-04-16 22:01:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 22:01:54] ANSI_COLOR="0;31"
[2025-04-16 22:01:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 22:01:54] HOME_URL="https://www.centos.org/"
[2025-04-16 22:01:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 22:01:54] 
[2025-04-16 22:01:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 22:01:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 22:01:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 22:01:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 22:01:54] 
[2025-04-16 22:01:54] 2025-04-16 13:01:35,784 | INFO     | **************************************
[2025-04-16 22:01:54] 2025-04-16 13:01:36,286 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-04-16 22:01:54] 2025-04-16 13:01:36,301 | INFO     | sufficient remaining disk space (958850400256 B)
[2025-04-16 22:01:54] 2025-04-16 13:01:36,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 22:01:54] 2025-04-16 13:01:36,301 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 22:01:54] 2025-04-16 13:01:36,301 | INFO     | update_server=False
[2025-04-16 22:01:54] 2025-04-16 13:01:36,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 22:01:54] 2025-04-16 13:01:36,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 22:01:54] 2025-04-16 13:01:36,301 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 22:01:54] 2025-04-16 13:01:36,302 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 22:01:54] 2025-04-16 13:01:36,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:01:54] 2025-04-16 13:01:36,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:01:54] 2025-04-16 13:01:36,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 22:01:54] 2025-04-16 13:01:36,302 | INFO     | aborting loop
[2025-04-16 22:01:54] 2025-04-16 13:01:36,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 22:01:54] 2025-04-16 13:01:36,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 22:01:54] 2025-04-16 13:01:36,956 | INFO     | all job control threads have been joined
[2025-04-16 22:01:54] 2025-04-16 13:01:37,194 | INFO     | all payload control threads have been joined
[2025-04-16 22:01:54] 2025-04-16 13:01:37,306 | INFO     | [job] retrieve thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:37,307 | INFO     | [job] queue monitor thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:37,308 | INFO     | [job] job monitor thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:37,313 | INFO     | all data control threads have been joined
[2025-04-16 22:01:54] 2025-04-16 13:01:37,335 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:37,342 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:37,422 | INFO     | [payload] validate_post thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:37,962 | INFO     | [job] control thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:38,142 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:38,199 | INFO     | [payload] control thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:38,203 | INFO     | [data] copytool_in thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:38,306 | INFO     | [data] copytool_out thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:38,318 | INFO     | [data] control thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:38,494 | INFO     | [payload] failed_post thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:38,731 | INFO     | [job] validate thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:40,798 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:46,857 | INFO     | job.realtimelogging is not enabled
[2025-04-16 22:01:54] 2025-04-16 13:01:47,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 22:01:54] 2025-04-16 13:01:49,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126387311941440)>', '<ExcThread(monitor, started 126386392004352)>']
[2025-04-16 22:01:54] 2025-04-16 13:01:50,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 22:01:54] 2025-04-16 13:01:50,369 | INFO     | [monitor] control thread has ended
[2025-04-16 22:01:54] 2025-04-16 13:01:54,448 | INFO     | all workflow threads have been joined
[2025-04-16 22:01:54] 2025-04-16 13:01:54,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 22:01:54] 2025-04-16 13:01:54,449 | INFO     | traces error code: 0
[2025-04-16 22:01:54] 2025-04-16 13:01:54,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 22:01:54] 2025-04-16 13:01:54,521 [wrapper] ==== pilot stdout END ====
[2025-04-16 22:01:54] 2025-04-16 13:01:54,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 22:01:54] 2025-04-16 13:01:54,525 [wrapper] pilotpid: 1507674
[2025-04-16 22:01:54] 2025-04-16 13:01:54,528 [wrapper] Pilot exit status: 0
[2025-04-16 22:01:54] 2025-04-16 13:01:54,535 [wrapper] pandaids: 6603683969
[2025-04-16 22:01:54] 2025-04-16 13:01:54,547 [wrapper] cleanup supervisor_pilot 1528995 1507675
[2025-04-16 22:01:54] 2025-04-16 13:01:54,549 [wrapper] Test setup, not cleaning
[2025-04-16 22:01:54] 2025-04-16 13:01:54,550 [wrapper] apfmon messages muted
[2025-04-16 22:01:54] 2025-04-16 13:01:54,552 [wrapper] ==== wrapper stdout END ====
[2025-04-16 22:01:54] 2025-04-16 13:01:54,553 [wrapper] ==== wrapper stderr END ====
[2025-04-16 22:01:54]  *** Error codes and diagnostics ***
[2025-04-16 22:01:54]     "exeErrorCode": 0,
[2025-04-16 22:01:54]     "exeErrorDiag": "",
[2025-04-16 22:01:54]     "pilotErrorCode": 0,
[2025-04-16 22:01:54]     "pilotErrorDiag": "",
[2025-04-16 22:01:54]  *** Listing of results directory ***
[2025-04-16 22:01:54] total 422776
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc    495897 Apr 15 18:34 pilot3.tar.gz
[2025-04-16 22:01:54] -rwx------ 1 boinc boinc     37140 Apr 15 18:45 runpilot2-wrapper.sh
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc      5111 Apr 15 18:45 queuedata.json
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc       100 Apr 16 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 22:01:54] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 21:25 run_atlas
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc       105 Apr 16 21:25 job.xml
[2025-04-16 22:01:54] -rw-r--r-- 2 boinc boinc     17569 Apr 16 21:25 start_atlas.sh
[2025-04-16 22:01:54] drwxrwx--x 1 boinc boinc        76 Apr 16 21:25 shared
[2025-04-16 22:01:54] -rw-r--r-- 2 boinc boinc    508884 Apr 16 21:25 input.tar.gz
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc      9929 Apr 16 21:25 init_data.xml
[2025-04-16 22:01:54] -rw-r--r-- 2 boinc boinc 225014086 Apr 16 21:25 EVNT.44075481._001038.pool.root.1
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc         0 Apr 16 21:25 boinc_lockfile
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc      2578 Apr 16 21:26 pandaJob.out
[2025-04-16 22:01:54] -rw------- 1 boinc boinc       424 Apr 16 21:26 setup.sh.local
[2025-04-16 22:01:54] -rw------- 1 boinc boinc    982907 Apr 16 21:26 agis_schedconf.cvmfs.json
[2025-04-16 22:01:54] -rw------- 1 boinc boinc   1603529 Apr 16 21:26 agis_ddmendpoints.agis.ALL.json
[2025-04-16 22:01:54] drwx------ 1 boinc boinc       368 Apr 16 21:26 pilot3
[2025-04-16 22:01:54] -rw------- 1 boinc boinc 202894116 Apr 16 22:01 HITS.44075483._026609.pool.root.1
[2025-04-16 22:01:54] -rw------- 1 boinc boinc        95 Apr 16 22:01 pilot_heartbeat.json
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc       530 Apr 16 22:01 boinc_task_state.xml
[2025-04-16 22:01:54] -rw------- 1 boinc boinc      1022 Apr 16 22:01 memory_monitor_summary.json
[2025-04-16 22:01:54] -rw------- 1 boinc boinc    352073 Apr 16 22:01 log.44075483._026609.job.log.tgz.1
[2025-04-16 22:01:54] -rw------- 1 boinc boinc      7671 Apr 16 22:01 heartbeat.json
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc        27 Apr 16 22:01 wrapper_checkpoint.txt
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc      8192 Apr 16 22:01 boinc_mmap_file
[2025-04-16 22:01:54] -rw------- 1 boinc boinc      4550 Apr 16 22:01 pilotlog.txt
[2025-04-16 22:01:54] -rw------- 1 boinc boinc    245364 Apr 16 22:01 log.44075483._026609.job.log.1
[2025-04-16 22:01:54] -rw------- 1 boinc boinc       357 Apr 16 22:01 output.list
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc       620 Apr 16 22:01 runtime_log
[2025-04-16 22:01:54] -rw------- 1 boinc boinc    614400 Apr 16 22:01 result.tar.gz
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc     11029 Apr 16 22:01 runtime_log.err
[2025-04-16 22:01:54] -rw------- 1 boinc boinc       649 Apr 16 22:01 bllMDmx1rO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm7L1KDmtSy0im.diag
[2025-04-16 22:01:54] -rw-r--r-- 1 boinc boinc     22273 Apr 16 22:01 stderr.txt
[2025-04-16 22:01:54] HITS file was successfully produced:
[2025-04-16 22:01:54] -rw------- 1 boinc boinc 202894116 Apr 16 22:01 shared/HITS.pool.root.1
[2025-04-16 22:01:54]  *** Contents of shared directory: ***
[2025-04-16 22:01:54] total 419004
[2025-04-16 22:01:54] -rw-r--r-- 2 boinc boinc     17569 Apr 16 21:25 start_atlas.sh
[2025-04-16 22:01:54] -rw-r--r-- 2 boinc boinc    508884 Apr 16 21:25 input.tar.gz
[2025-04-16 22:01:54] -rw-r--r-- 2 boinc boinc 225014086 Apr 16 21:25 ATLAS.root_0
[2025-04-16 22:01:54] -rw------- 1 boinc boinc 202894116 Apr 16 22:01 HITS.pool.root.1
[2025-04-16 22:01:54] -rw------- 1 boinc boinc    614400 Apr 16 22:01 result.tar.gz
22:01:56 (1503930): run_atlas exited; CPU time 14255.388458
22:01:56 (1503930): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN