Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:02:56 (277102): wrapper (7.7.26015): starting
02:02:56 (277102): wrapper: running run_atlas (--nthreads 6)
[2025-04-16 02:02:56] Arguments: --nthreads 6
[2025-04-16 02:02:56] Threads: 6
[2025-04-16 02:02:56] Checking for CVMFS
[2025-04-16 02:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 02:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 02:02:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 02:02:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 02:02:57] 2.11.5.0 1864725 4948 99456 144896 1 56 20875378 20971521 929 130560 0 6981507 99.994 1052660 73 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-16 02:02:57] CVMFS is ok
[2025-04-16 02:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 02:02:57] Checking for apptainer binary...
[2025-04-16 02:02:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 02:02:57] Running /usr/bin/apptainer --version
[2025-04-16 02:02:57] apptainer version 1.3.6-1.el9
[2025-04-16 02:02:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 02:02:57] testio006
[2025-04-16 02:02:57] apptainer works
[2025-04-16 02:02:57] Set ATHENA_PROC_NUMBER=6
[2025-04-16 02:02:57] Set ATHENA_CORE_NUMBER=6
[2025-04-16 02:02:57] Starting ATLAS job with PandaID=6602376334
[2025-04-16 02:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 03:39:26]  *** The last 200 lines of the pilot log: ***
[2025-04-16 03:39:26]  filetype=log
[2025-04-16 03:39:26]  guid=33948388-f18c-4fe6-97ba-81977ef1bbea
[2025-04-16 03:39:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-16 03:39:26]  is_altstaged=None
[2025-04-16 03:39:26]  is_tar=False
[2025-04-16 03:39:26]  lfn=log.44075483._020678.job.log.tgz.1
[2025-04-16 03:39:26]  mtime=0
[2025-04-16 03:39:26]  protocol_id=None
[2025-04-16 03:39:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 03:39:26]  replicas=None
[2025-04-16 03:39:26]  scope=mc23_13p6TeV
[2025-04-16 03:39:26]  status=None
[2025-04-16 03:39:26]  status_code=0
[2025-04-16 03:39:26]  storage_token=
[2025-04-16 03:39:26]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6602376334/log.44075483._020678.job.log.tgz.1
[2025-04-16 03:39:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/7d/log.44075483._020678.job.log.tgz.1
[2025-04-16 03:39:26]  workdir=None
[2025-04-16 03:39:26] ]
[2025-04-16 03:39:26] 2025-04-15 18:39:02,949 | INFO     | transferring file log.44075483._020678.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6602376334/log.44075483._020678.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-16 03:39:26] 2025-04-15 18:39:02,949 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6602376334/log.44075483._020678.job.log.tgz.1 /var/lib/boinc/slots/1/log.44075483._020678.job
[2025-04-16 03:39:26] 2025-04-15 18:39:02,964 | INFO     | adding to output.list: log.44075483._020678.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/7d/log.44075483._020678.job.log.tg
[2025-04-16 03:39:26] 2025-04-15 18:39:02,965 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 03:39:26] 2025-04-15 18:39:02,965 | INFO     | summary of transferred files:
[2025-04-16 03:39:26] 2025-04-15 18:39:02,965 | INFO     |  -- lfn=log.44075483._020678.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 03:39:26] 2025-04-15 18:39:02,965 | INFO     | stage-out finished correctly
[2025-04-16 03:39:26] 2025-04-15 18:39:03,510 | INFO     | monitor loop #420: job 0:6602376334 is in state 'finished'
[2025-04-16 03:39:26] 2025-04-15 18:39:03,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 03:39:26] 2025-04-15 18:39:04,789 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 03:39:26] 2025-04-15 18:39:06,013 | INFO     | monitor loop #421: job 0:6602376334 is in state 'finished'
[2025-04-16 03:39:26] 2025-04-15 18:39:06,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 03:39:26] 2025-04-15 18:39:07,853 | INFO     | job 6602376334 has state=finished
[2025-04-16 03:39:26] 2025-04-15 18:39:07,853 | INFO     | preparing for final server update for job 6602376334 in state='finished'
[2025-04-16 03:39:26] 2025-04-15 18:39:07,853 | INFO     | this job has now completed (state=finished)
[2025-04-16 03:39:26] 2025-04-15 18:39:07,854 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 03:39:26] 2025-04-15 18:39:07,854 | INFO     | log transfer has been attempted: DONE
[2025-04-16 03:39:26] 2025-04-15 18:39:07,854 | INFO     | job 6602376334 has finished - writing final server update
[2025-04-16 03:39:26] 2025-04-15 18:39:07,854 | INFO     | total number of processed events: 400 (read)
[2025-04-16 03:39:26] 2025-04-15 18:39:07,855 | INFO     | executing command: lscpu
[2025-04-16 03:39:26] 2025-04-15 18:39:07,882 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 03:39:26] 2025-04-15 18:39:08,516 | INFO     | monitor loop #422: job 0:6602376334 is in state 'finished'
[2025-04-16 03:39:26] 2025-04-15 18:39:08,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 03:39:26] 2025-04-15 18:39:10,673 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-16 03:39:26] 2025-04-15 18:39:10,673 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6602376334/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 03:39:26] 2025-04-15 18:39:10,674 | INFO     | extracted standard info from prmon json
[2025-04-16 03:39:26] 2025-04-15 18:39:10,674 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 03:39:26] 2025-04-15 18:39:10,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 03:39:26] 2025-04-15 18:39:10,674 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 03:39:26] 2025-04-15 18:39:10,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | fitting pss+swap vs Time
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | sum of square deviations: 204163828.0
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | sum of deviations: 23352983190.000008
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | mean x: 1744739556.0
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | mean y: 2350535.0459770113
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | -- intersect: -199567151669.80136
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | intersect: -199567151669.80136
[2025-04-16 03:39:26] 2025-04-15 18:39:10,676 | INFO     | chi2: 1.3729333218035984
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | -- intersect: -199567151669.80136
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | current memory leak: 114.38 B/s (using 87 data points, chi2=1.37)
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | ..............................
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . Timing measurements:
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . get job = 0 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . initial setup = 5 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . payload setup = 4 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . stage-in = 0 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . payload execution = 5714 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . stage-out = 0 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | . log creation = 0 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,677 | INFO     | ..............................
[2025-04-16 03:39:26] 2025-04-15 18:39:10,731 | INFO     | 
[2025-04-16 03:39:26] 2025-04-15 18:39:10,731 | INFO     | job summary report
[2025-04-16 03:39:26] 2025-04-15 18:39:10,731 | INFO     | --------------------------------------------------
[2025-04-16 03:39:26] 2025-04-15 18:39:10,731 | INFO     | PanDA job id: 6602376334
[2025-04-16 03:39:26] 2025-04-15 18:39:10,731 | INFO     | task id: 44075483
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | errors: (none)
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | pilot state: finished 
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | transexitcode: 0
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | exeerrorcode: 0
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | exeerrordiag: 
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | exitcode: 0
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | exitmsg: OK
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | cpuconsumptiontime: 28016 s
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | nevents: 400
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | neventsw: 0
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | pid: 287372
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | pgrp: 287372
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | corecount: 6
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | event service: False
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | sizes: {0: 2417363, 1: 2417363, 4: 2417597, 11: 2417625, 5722: 2444185, 5723: 2453126, 5725: 2453310, 5731: 2453480}
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | --------------------------------------------------
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | 
[2025-04-16 03:39:26] 2025-04-15 18:39:10,732 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | job 6602376334 has completed (purged errors)
[2025-04-16 03:39:26] 2025-04-15 18:39:10,747 | INFO     | overall cleanup function is called
[2025-04-16 03:39:26] 2025-04-15 18:39:11,754 | INFO     | --- collectZombieJob: --- 10, [287372]
[2025-04-16 03:39:26] 2025-04-15 18:39:11,754 | INFO     | zombie collector waiting for pid 287372
[2025-04-16 03:39:26] 2025-04-15 18:39:11,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 03:39:26] 2025-04-15 18:39:11,754 | INFO     | collected zombie processes
[2025-04-16 03:39:26] 2025-04-15 18:39:11,754 | INFO     | will attempt to kill all subprocesses of pid=287372
[2025-04-16 03:39:26] 2025-04-15 18:39:11,845 | INFO     | process IDs to be killed: [287372] (in reverse order)
[2025-04-16 03:39:26] 2025-04-15 18:39:11,884 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 03:39:26] 2025-04-15 18:39:11,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 03:39:26] 2025-04-15 18:39:11,887 | INFO     | did not find any defunct processes belonging to 287372
[2025-04-16 03:39:26] 2025-04-15 18:39:11,889 | INFO     | did not find any defunct processes belonging to 287372
[2025-04-16 03:39:26] 2025-04-15 18:39:11,889 | INFO     | ready for new job
[2025-04-16 03:39:26] 2025-04-15 18:39:11,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 03:39:26] 2025-04-15 18:39:11,890 | INFO     | **************************************
[2025-04-16 03:39:26] 2025-04-15 18:39:11,890 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 03:39:26] 2025-04-15 18:39:11,890 | INFO     | **************************************
[2025-04-16 03:39:26] 2025-04-15 18:39:11,890 | INFO     | 
[2025-04-16 03:39:26] 2025-04-15 18:39:11,891 | INFO     | architecture information:
[2025-04-16 03:39:26] 2025-04-15 18:39:11,891 | INFO     | executing command: cat /etc/os-release
[2025-04-16 03:39:26] 2025-04-15 18:39:11,903 | INFO     | cat /etc/os-release:
[2025-04-16 03:39:26] NAME="CentOS Linux"
[2025-04-16 03:39:26] VERSION="7 (Core)"
[2025-04-16 03:39:26] ID="centos"
[2025-04-16 03:39:26] ID_LIKE="rhel fedora"
[2025-04-16 03:39:26] VERSION_ID="7"
[2025-04-16 03:39:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 03:39:26] ANSI_COLOR="0;31"
[2025-04-16 03:39:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 03:39:26] HOME_URL="https://www.centos.org/"
[2025-04-16 03:39:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 03:39:26] 
[2025-04-16 03:39:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 03:39:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 03:39:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 03:39:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 03:39:26] 
[2025-04-16 03:39:26] 2025-04-15 18:39:11,903 | INFO     | **************************************
[2025-04-16 03:39:26] 2025-04-15 18:39:12,406 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-16 03:39:26] 2025-04-15 18:39:12,421 | INFO     | sufficient remaining disk space (77270614016 B)
[2025-04-16 03:39:26] 2025-04-15 18:39:12,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 03:39:26] 2025-04-15 18:39:12,422 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 03:39:26] 2025-04-15 18:39:12,422 | INFO     | update_server=False
[2025-04-16 03:39:26] 2025-04-15 18:39:12,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 03:39:26] 2025-04-15 18:39:12,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 03:39:26] 2025-04-15 18:39:12,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 03:39:26] 2025-04-15 18:39:12,422 | INFO     | aborting loop
[2025-04-16 03:39:26] 2025-04-15 18:39:12,564 | INFO     | all data control threads have been joined
[2025-04-16 03:39:26] 2025-04-15 18:39:12,565 | INFO     | all payload control threads have been joined
[2025-04-16 03:39:26] 2025-04-15 18:39:12,860 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 03:39:26] 2025-04-15 18:39:12,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 03:39:26] 2025-04-15 18:39:12,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 03:39:26] 2025-04-15 18:39:13,427 | INFO     | [job] retrieve thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:13,428 | INFO     | [job] queue monitor thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:13,428 | INFO     | [job] job monitor thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:13,458 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:13,492 | INFO     | [data] copytool_in thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:13,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 03:39:26] 2025-04-15 18:39:13,569 | INFO     | [data] control thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:13,570 | INFO     | [payload] control thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:13,773 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:14,002 | INFO     | all job control threads have been joined
[2025-04-16 03:39:26] 2025-04-15 18:39:14,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:14,558 | INFO     | [payload] validate_post thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:14,741 | INFO     | [job] validate thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:14,821 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:14,982 | INFO     | [payload] failed_post thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:15,007 | INFO     | [job] control thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:15,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 03:39:26] 2025-04-15 18:39:15,555 | INFO     | [data] copytool_out thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:19,373 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 03:39:26] 2025-04-15 18:39:21,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591031609152)>', '<ExcThread(monitor, started 140590251505408)>']
[2025-04-16 03:39:26] 2025-04-15 18:39:21,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 03:39:26] 2025-04-15 18:39:21,905 | INFO     | [monitor] control thread has ended
[2025-04-16 03:39:26] 2025-04-15 18:39:26,031 | INFO     | all workflow threads have been joined
[2025-04-16 03:39:26] 2025-04-15 18:39:26,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 03:39:26] 2025-04-15 18:39:26,031 | INFO     | traces error code: 0
[2025-04-16 03:39:26] 2025-04-15 18:39:26,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 03:39:26] 2025-04-15 18:39:26,125 [wrapper] ==== pilot stdout END ====
[2025-04-16 03:39:26] 2025-04-15 18:39:26,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 03:39:26] 2025-04-15 18:39:26,128 [wrapper] pilotpid: 280824
[2025-04-16 03:39:26] 2025-04-15 18:39:26,130 [wrapper] Pilot exit status: 0
[2025-04-16 03:39:26] 2025-04-15 18:39:26,138 [wrapper] pandaids: 6602376334
[2025-04-16 03:39:26] 2025-04-15 18:39:26,164 [wrapper] cleanup supervisor_pilot  325681 280825
[2025-04-16 03:39:26] 2025-04-15 18:39:26,167 [wrapper] Test setup, not cleaning
[2025-04-16 03:39:26] 2025-04-15 18:39:26,169 [wrapper] apfmon messages muted
[2025-04-16 03:39:26] 2025-04-15 18:39:26,171 [wrapper] ==== wrapper stdout END ====
[2025-04-16 03:39:26] 2025-04-15 18:39:26,173 [wrapper] ==== wrapper stderr END ====
[2025-04-16 03:39:26]  *** Error codes and diagnostics ***
[2025-04-16 03:39:26]     "exeErrorCode": 0,
[2025-04-16 03:39:26]     "exeErrorDiag": "",
[2025-04-16 03:39:26]     "pilotErrorCode": 0,
[2025-04-16 03:39:26]     "pilotErrorDiag": "",
[2025-04-16 03:39:26]  *** Listing of results directory ***
[2025-04-16 03:39:26] total 421404
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc    495897 Apr 15 06:06 pilot3.tar.gz
[2025-04-16 03:39:26] -rwx------. 1 boinc boinc     37140 Apr 15 06:11 runpilot2-wrapper.sh
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc      5111 Apr 15 06:11 queuedata.json
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc       100 Apr 16 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 03:39:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 16 02:02 run_atlas
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc       105 Apr 16 02:02 job.xml
[2025-04-16 03:39:26] -rw-r--r--. 2 boinc boinc 225776160 Apr 16 02:02 EVNT.44075481._000819.pool.root.1
[2025-04-16 03:39:26] -rw-r--r--. 2 boinc boinc     17569 Apr 16 02:02 start_atlas.sh
[2025-04-16 03:39:26] drwxrwx--x. 2 boinc boinc        68 Apr 16 02:02 shared
[2025-04-16 03:39:26] -rw-r--r--. 2 boinc boinc    508891 Apr 16 02:02 input.tar.gz
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc      9465 Apr 16 02:02 init_data.xml
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc         0 Apr 16 02:02 boinc_lockfile
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc      2577 Apr 16 02:02 pandaJob.out
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc       424 Apr 16 02:02 setup.sh.local
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc    984001 Apr 16 02:03 agis_schedconf.cvmfs.json
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc   1603529 Apr 16 02:03 agis_ddmendpoints.agis.ALL.json
[2025-04-16 03:39:26] drwx------. 4 boinc boinc      4096 Apr 16 02:03 pilot3
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc 200232871 Apr 16 03:38 HITS.44075483._020678.pool.root.1
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc       529 Apr 16 03:38 boinc_task_state.xml
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc      1031 Apr 16 03:38 memory_monitor_summary.json
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc    286183 Apr 16 03:39 log.44075483._020678.job.log.tgz.1
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc      7667 Apr 16 03:39 heartbeat.json
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc        95 Apr 16 03:39 pilot_heartbeat.json
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc      8192 Apr 16 03:39 boinc_mmap_file
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc        27 Apr 16 03:39 wrapper_checkpoint.txt
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc      4353 Apr 16 03:39 pilotlog.txt
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc    551895 Apr 16 03:39 log.44075483._020678.job.log.1
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc       357 Apr 16 03:39 output.list
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc       620 Apr 16 03:39 runtime_log
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc    860160 Apr 16 03:39 result.tar.gz
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc     10971 Apr 16 03:39 runtime_log.err
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc       643 Apr 16 03:39 Bl0NDm8GgO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmyuWLDmUyrGGo.diag
[2025-04-16 03:39:26] -rw-r--r--. 1 boinc boinc     20911 Apr 16 03:39 stderr.txt
[2025-04-16 03:39:26] HITS file was successfully produced:
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc 200232871 Apr 16 03:38 shared/HITS.pool.root.1
[2025-04-16 03:39:26]  *** Contents of shared directory: ***
[2025-04-16 03:39:26] total 417388
[2025-04-16 03:39:26] -rw-r--r--. 2 boinc boinc 225776160 Apr 16 02:02 ATLAS.root_0
[2025-04-16 03:39:26] -rw-r--r--. 2 boinc boinc     17569 Apr 16 02:02 start_atlas.sh
[2025-04-16 03:39:26] -rw-r--r--. 2 boinc boinc    508891 Apr 16 02:02 input.tar.gz
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc 200232871 Apr 16 03:38 HITS.pool.root.1
[2025-04-16 03:39:26] -rw-------. 1 boinc boinc    860160 Apr 16 03:39 result.tar.gz
03:39:27 (277102): run_atlas exited; CPU time 28066.880716
03:39:27 (277102): called boinc_finish(0)

</stderr_txt>
]]>

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