Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
18:13:35 (211134): wrapper (7.7.26015): starting
18:13:35 (211134): wrapper: running run_atlas (--nthreads 2)
[2025-04-15 18:13:35] Arguments: --nthreads 2
[2025-04-15 18:13:35] Threads: 2
[2025-04-15 18:13:35] Checking for CVMFS
[2025-04-15 18:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 18:13:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 18:13:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 18:13:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 18:13:43] 2.11.0.0 211346 0 25540 144894 3 1 3355718 6144001 0 130560 0 0 0.000 1170 386 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-15 18:13:43] CVMFS is ok
[2025-04-15 18:13:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 18:13:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-15 18:13:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-15 18:13:43] Further information can be found at the LHC@home message board.
[2025-04-15 18:13:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 18:13:43] Checking for apptainer binary...
[2025-04-15 18:13:43] apptainer is not installed, using version from CVMFS
[2025-04-15 18:13:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 18:13:46] charm
[2025-04-15 18:13:46] apptainer works
[2025-04-15 18:13:46] Set ATHENA_PROC_NUMBER=2
[2025-04-15 18:13:46] Set ATHENA_CORE_NUMBER=2
[2025-04-15 18:13:46] Starting ATLAS job with PandaID=6603684955
[2025-04-15 18:13:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 18:22:43]  *** The last 200 lines of the pilot log: ***
[2025-04-15 18:22:43] 2025-04-15 16:22:28,933 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-15 18:22:43] 2025-04-15 16:22:29,677 | INFO     | PID=215280 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | WARNING  | file does not exist either: /var/lib/boinc-client/slots/2/PanDA_Pilot-6603684955/memory_monitor_output.txt
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | INFO     | memory summary dictionary not yet available
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | INFO     | ..............................
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . Timing measurements:
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . get job = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . initial setup = 5 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . payload setup = 8 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . stage-in = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . payload execution = 160 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . stage-out = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . log creation = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | ..............................
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-6603684955/pilotlog.txt
[2025-04-15 18:22:43] 2025-04-15 16:22:30,270 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-15 18:22:43] - Log from pilotlog.txt -
[2025-04-15 18:22:43] 2025-04-15 16:22:28,933 | INFO     | monitor loop #115: job 0:6603684955 is in state 'failed'
[2025-04-15 18:22:43] 2025-04-15 16:22:28,933 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-15 18:22:43] 2025-04-15 16:22:29,677 | INFO     | PID=215280 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | WARNING  | file does not exist either: /var/lib/boinc-client/slots/2/PanDA_Pilot-6603684955/memory_monitor_output.txt
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | INFO     | memory summary dictionary not yet available
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | INFO     | ..............................
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . Timing measurements:
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . get job = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . initial setup = 5 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . payload setup = 8 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . stage-in = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . payload execution = 160 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . stage-out = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . log creation = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | ..............................
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-6603684955/pilotlog.txt
[2025-04-15 18:22:43] 2025-04-15 16:22:30,271 | WARNING  | 
[2025-04-15 18:22:43] [begin log extracts]
[2025-04-15 18:22:43] - Log from pilotlog.txt -
[2025-04-15 18:22:43] 2025-04-15 16:22:28,933 | INFO     | monitor loop #115: job 0:6603684955 is in state 'failed'
[2025-04-15 18:22:43] 2025-04-15 16:22:28,933 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-15 18:22:43] 2025-04-15 16:22:29,677 | INFO     | PID=215280 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | WARNING  | file does not exist either: /var/lib/boinc-client/slots/2/PanDA_Pilot-6603684955/memory_monitor_output.txt
[2025-04-15 18:22:43] 2025-04-15 16:22:30,251 | INFO     | memory summary dictionary not yet available
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 18:22:43] 2025-04-15 16:22:30,252 | INFO     | ..............................
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . Timing measurements:
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . get job = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . initial setup = 5 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . payload setup = 8 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . stage-in = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . payload execution = 160 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . stage-out = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,253 | INFO     | . log creation = 0 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | ..............................
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-15 18:22:43] 2025-04-15 16:22:30,254 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-6603684955/pilotlog.txt
[2025-04-15 18:22:43] [end log extracts]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,271 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-15 18:22:43] 2025-04-15 16:22:30,273 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-15 18:22:43] 2025-04-15 16:22:30,386 | INFO     | 
[2025-04-15 18:22:43] 2025-04-15 16:22:30,386 | INFO     | job summary report
[2025-04-15 18:22:43] 2025-04-15 16:22:30,386 | INFO     | --------------------------------------------------
[2025-04-15 18:22:43] 2025-04-15 16:22:30,386 | INFO     | PanDA job id: 6603684955
[2025-04-15 18:22:43] 2025-04-15 16:22:30,386 | INFO     | task id: 44075483
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-15 18:19:16,553 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | pilot state: failed 
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | transexitcode: 65
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | exeerrorcode: 65
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | exitcode: 65
[2025-04-15 18:22:43] 2025-04-15 16:22:30,387 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | cpuconsumptiontime: 136 s
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | nevents: 0
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | neventsw: 0
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | pid: 221615
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | pgrp: 221615
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | corecount: 2
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | event service: False
[2025-04-15 18:22:43] 2025-04-15 16:22:30,388 | INFO     | sizes: {0: 2417258, 1: 2417400, 5: 2417606, 12: 2417662, 233: 2440987, 234: 2440991, 235: 2445392, 238: 2445420, 360: 2445562}
[2025-04-15 18:22:43] 2025-04-15 16:22:30,389 | INFO     | --------------------------------------------------
[2025-04-15 18:22:43] 2025-04-15 16:22:30,389 | INFO     | 
[2025-04-15 18:22:43] 2025-04-15 16:22:30,389 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-04-15 18:22:43] 2025-04-15 16:22:30,410 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,411 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,411 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,411 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 18:22:43] 2025-04-15 16:22:30,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 18:22:43] 2025-04-15 16:22:30,414 | INFO     | job 6603684955 has completed (purged errors)
[2025-04-15 18:22:43] 2025-04-15 16:22:30,415 | INFO     | overall cleanup function is called
[2025-04-15 18:22:43] 2025-04-15 16:22:31,422 | INFO     | --- collectZombieJob: --- 10, [221615]
[2025-04-15 18:22:43] 2025-04-15 16:22:31,423 | INFO     | zombie collector waiting for pid 221615
[2025-04-15 18:22:43] 2025-04-15 16:22:31,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 18:22:43] 2025-04-15 16:22:31,423 | INFO     | collected zombie processes
[2025-04-15 18:22:43] 2025-04-15 16:22:31,424 | INFO     | will attempt to kill all subprocesses of pid=221615
[2025-04-15 18:22:43] 2025-04-15 16:22:31,485 | INFO     | process IDs to be killed: [221615] (in reverse order)
[2025-04-15 18:22:43] 2025-04-15 16:22:31,524 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 18:22:43] 2025-04-15 16:22:31,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 18:22:43] 2025-04-15 16:22:31,527 | INFO     | did not find any defunct processes belonging to 221615
[2025-04-15 18:22:43] 2025-04-15 16:22:31,530 | INFO     | did not find any defunct processes belonging to 221615
[2025-04-15 18:22:43] 2025-04-15 16:22:31,531 | INFO     | ready for new job
[2025-04-15 18:22:43] 2025-04-15 16:22:31,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 18:22:43] 2025-04-15 16:22:31,533 | INFO     | **************************************
[2025-04-15 18:22:43] 2025-04-15 16:22:31,533 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 18:22:43] 2025-04-15 16:22:31,533 | INFO     | **************************************
[2025-04-15 18:22:43] 2025-04-15 16:22:31,533 | INFO     | 
[2025-04-15 18:22:43] 2025-04-15 16:22:31,553 | INFO     | architecture information:
[2025-04-15 18:22:43] 2025-04-15 16:22:31,554 | INFO     | executing command: cat /etc/os-release
[2025-04-15 18:22:43] 2025-04-15 16:22:31,574 | INFO     | cat /etc/os-release:
[2025-04-15 18:22:43] NAME="CentOS Linux"
[2025-04-15 18:22:43] VERSION="7 (Core)"
[2025-04-15 18:22:43] ID="centos"
[2025-04-15 18:22:43] ID_LIKE="rhel fedora"
[2025-04-15 18:22:43] VERSION_ID="7"
[2025-04-15 18:22:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 18:22:43] ANSI_COLOR="0;31"
[2025-04-15 18:22:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 18:22:43] HOME_URL="https://www.centos.org/"
[2025-04-15 18:22:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 18:22:43] 
[2025-04-15 18:22:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 18:22:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 18:22:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 18:22:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 18:22:43] 
[2025-04-15 18:22:43] 2025-04-15 16:22:31,574 | INFO     | **************************************
[2025-04-15 18:22:43] 2025-04-15 16:22:32,077 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-04-15 18:22:43] 2025-04-15 16:22:32,100 | INFO     | sufficient remaining disk space (121141985280 B)
[2025-04-15 18:22:43] 2025-04-15 16:22:32,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 18:22:43] 2025-04-15 16:22:32,101 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 18:22:43] 2025-04-15 16:22:32,101 | INFO     | update_server=False
[2025-04-15 18:22:43] 2025-04-15 16:22:32,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 18:22:43] 2025-04-15 16:22:32,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 18:22:43] 2025-04-15 16:22:32,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 18:22:43] 2025-04-15 16:22:32,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 18:22:43] 2025-04-15 16:22:32,102 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 18:22:43] 2025-04-15 16:22:32,103 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 18:22:43] 2025-04-15 16:22:32,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 18:22:43] 2025-04-15 16:22:32,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 18:22:43] 2025-04-15 16:22:32,244 | INFO     | all payload control threads have been joined
[2025-04-15 18:22:43] 2025-04-15 16:22:32,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 18:22:43] 2025-04-15 16:22:32,442 | INFO     | aborting loop
[2025-04-15 18:22:43] 2025-04-15 16:22:32,873 | INFO     | all data control threads have been joined
[2025-04-15 18:22:43] 2025-04-15 16:22:33,103 | INFO     | [job] queue monitor thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,107 | INFO     | [job] retrieve thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,238 | INFO     | [payload] validate_post thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,241 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,249 | INFO     | [payload] control thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,293 | INFO     | all job control threads have been joined
[2025-04-15 18:22:43] 2025-04-15 16:22:33,448 | INFO     | [job] job monitor thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,509 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,745 | INFO     | [data] copytool_in thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,840 | INFO     | [payload] failed_post thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:33,877 | INFO     | [data] control thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:34,109 | INFO     | [data] copytool_out thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:34,217 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:34,297 | INFO     | [job] control thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:34,406 | INFO     | [job] validate thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:34,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:36,110 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 18:22:43] 2025-04-15 16:22:37,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707328272192)>', '<ExcThread(monitor, started 140706593097472)>']
[2025-04-15 18:22:43] 2025-04-15 16:22:38,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 18:22:43] 2025-04-15 16:22:38,128 | INFO     | [monitor] control thread has ended
[2025-04-15 18:22:43] 2025-04-15 16:22:42,728 | INFO     | all workflow threads have been joined
[2025-04-15 18:22:43] 2025-04-15 16:22:42,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 18:22:43] 2025-04-15 16:22:42,729 | INFO     | traces error code: 0
[2025-04-15 18:22:43] 2025-04-15 16:22:42,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 18:22:43] 2025-04-15 16:22:42,874 [wrapper] ==== pilot stdout END ====
[2025-04-15 18:22:43] 2025-04-15 16:22:42,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 18:22:43] 2025-04-15 16:22:42,880 [wrapper] pilotpid: 215280
[2025-04-15 18:22:43] 2025-04-15 16:22:42,883 [wrapper] Pilot exit status: 0
[2025-04-15 18:22:43] 2025-04-15 16:22:42,930 [wrapper] pandaids: 6603684955
[2025-04-15 18:22:43] 2025-04-15 16:22:42,953 [wrapper] cleanup supervisor_pilot  215286 215281
[2025-04-15 18:22:43] 2025-04-15 16:22:42,956 [wrapper] Test setup, not cleaning
[2025-04-15 18:22:43] 2025-04-15 16:22:42,959 [wrapper] apfmon messages muted
[2025-04-15 18:22:43] 2025-04-15 16:22:42,962 [wrapper] ==== wrapper stdout END ====
[2025-04-15 18:22:43] 2025-04-15 16:22:42,966 [wrapper] ==== wrapper stderr END ====
[2025-04-15 18:22:43]  *** Error codes and diagnostics ***
[2025-04-15 18:22:43]     "exeErrorCode": 65,
[2025-04-15 18:22:43]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-15 18:22:43]     "pilotErrorCode": 1305,
[2025-04-15 18:22:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-15 18:22:43]  *** Listing of results directory ***
[2025-04-15 18:22:43] total 221716
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc    495897 apr 15 13:22 pilot3.tar.gz
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc      5111 apr 15 13:39 queuedata.json
[2025-04-15 18:22:43] -rwx------ 1 boinc boinc     37140 apr 15 13:42 runpilot2-wrapper.sh
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc       100 apr 15 18:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 18:22:43] -rwxr-xr-x 1 boinc boinc      7986 apr 15 18:13 run_atlas
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc       105 apr 15 18:13 job.xml
[2025-04-15 18:22:43] -rw-r--r-- 2 boinc boinc     17569 apr 15 18:13 start_atlas.sh
[2025-04-15 18:22:43] drwxrwx--x 2 boinc boinc      4096 apr 15 18:13 shared
[2025-04-15 18:22:43] -rw-r--r-- 2 boinc boinc    508898 apr 15 18:13 input.tar.gz
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc      6210 apr 15 18:13 init_data.xml
[2025-04-15 18:22:43] -rw-r--r-- 2 boinc boinc 222851376 apr 15 18:13 EVNT.44075481._001072.pool.root.1
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc         0 apr 15 18:13 boinc_lockfile
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc      2578 apr 15 18:13 pandaJob.out
[2025-04-15 18:22:43] -rw------- 1 boinc boinc       424 apr 15 18:13 setup.sh.local
[2025-04-15 18:22:43] -rw------- 1 boinc boinc    984001 apr 15 18:16 agis_schedconf.cvmfs.json
[2025-04-15 18:22:43] -rw------- 1 boinc boinc   1603529 apr 15 18:16 agis_ddmendpoints.agis.ALL.json
[2025-04-15 18:22:43] drwx------ 4 boinc boinc      4096 apr 15 18:16 pilot3
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc       524 apr 15 18:19 boinc_task_state.xml
[2025-04-15 18:22:43] -rw------- 1 boinc boinc     46906 apr 15 18:20 log.44075483._027450.job.log.tgz.1
[2025-04-15 18:22:43] -rw------- 1 boinc boinc        95 apr 15 18:22 pilot_heartbeat.json
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc      8192 apr 15 18:22 boinc_mmap_file
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc        23 apr 15 18:22 wrapper_checkpoint.txt
[2025-04-15 18:22:43] -rw------- 1 boinc boinc      7986 apr 15 18:22 heartbeat.json
[2025-04-15 18:22:43] -rw------- 1 boinc boinc      4484 apr 15 18:22 pilotlog.txt
[2025-04-15 18:22:43] -rw------- 1 boinc boinc    125068 apr 15 18:22 log.44075483._027450.job.log.1
[2025-04-15 18:22:43] -rw------- 1 boinc boinc       188 apr 15 18:22 output.list
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc       620 apr 15 18:22 runtime_log
[2025-04-15 18:22:43] -rw------- 1 boinc boinc    194560 apr 15 18:22 result.tar.gz
[2025-04-15 18:22:43] -rw------- 1 boinc boinc       640 apr 15 18:22 u9rKDm7qtO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm44XLDm6IURim.diag
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc     10936 apr 15 18:22 runtime_log.err
[2025-04-15 18:22:43] -rw-r--r-- 1 boinc boinc     22204 apr 15 18:22 stderr.txt
[2025-04-15 18:22:43] No HITS result produced
[2025-04-15 18:22:43]  *** Contents of shared directory: ***
[2025-04-15 18:22:43] total 218348
[2025-04-15 18:22:43] -rw-r--r-- 2 boinc boinc     17569 apr 15 18:13 start_atlas.sh
[2025-04-15 18:22:43] -rw-r--r-- 2 boinc boinc    508898 apr 15 18:13 input.tar.gz
[2025-04-15 18:22:43] -rw-r--r-- 2 boinc boinc 222851376 apr 15 18:13 ATLAS.root_0
[2025-04-15 18:22:43] -rw------- 1 boinc boinc    194560 apr 15 18:22 result.tar.gz
18:22:44 (211134): run_atlas exited; CPU time 134.811858
18:22:44 (211134): called boinc_finish(0)

</stderr_txt>
]]>

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