Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:48:28 (14886): wrapper (7.7.26015): starting
10:48:28 (14886): wrapper: running run_atlas (--nthreads 8)
[2025-04-15 10:48:28] Arguments: --nthreads 8
[2025-04-15 10:48:28] Threads: 8
[2025-04-15 10:48:28] Checking for CVMFS
[2025-04-15 10:48:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 10:48:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 10:48:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 10:48:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 10:48:29] 2.11.2.0 66527 14779 135480 144892 0 332 10572508 18432001 23310 130560 0 80160332 98.719 210252336 57186 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 10:48:29] CVMFS is ok
[2025-04-15 10:48:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 10:48:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 10:48:29] Further information can be found at the LHC@home message board.
[2025-04-15 10:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 10:48:29] Checking for apptainer binary...
[2025-04-15 10:48:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 10:48:29] Running /usr/bin/apptainer --version
[2025-04-15 10:48:29] apptainer version 1.3.2-1.el7
[2025-04-15 10:48:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 10:48:32] c-212-3.aglt2.org
[2025-04-15 10:48:32] apptainer works
[2025-04-15 10:48:32] Set ATHENA_PROC_NUMBER=8
[2025-04-15 10:48:32] Set ATHENA_CORE_NUMBER=8
[2025-04-15 10:48:32] Starting ATLAS job with PandaID=6603679705
[2025-04-15 10:48:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:30:49 (61757): wrapper (7.7.26015): starting
14:30:49 (61757): wrapper: running run_atlas (--nthreads 8)
[2025-04-15 14:30:49] Arguments: --nthreads 8
[2025-04-15 14:30:49] Threads: 8
[2025-04-15 14:30:49] This job has been restarted, cleaning up previous attempt
[2025-04-15 14:30:49] Checking for CVMFS
[2025-04-15 14:30:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 14:30:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 14:30:49] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 14:30:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 14:30:50] 2.11.2.0 66527 15002 141716 144899 2 580 13194233 18432001 21362 130560 0 84086390 98.760 214065171 56654 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 14:30:50] CVMFS is ok
[2025-04-15 14:30:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 14:30:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 14:30:50] Further information can be found at the LHC@home message board.
[2025-04-15 14:30:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 14:30:50] Checking for apptainer binary...
[2025-04-15 14:30:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 14:30:50] Running /usr/bin/apptainer --version
[2025-04-15 14:30:50] apptainer version 1.3.2-1.el7
[2025-04-15 14:30:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 14:30:52] c-212-3.aglt2.org
[2025-04-15 14:30:52] apptainer works
[2025-04-15 14:30:52] Set ATHENA_PROC_NUMBER=8
[2025-04-15 14:30:52] Set ATHENA_CORE_NUMBER=8
[2025-04-15 14:30:52] Starting ATLAS job with PandaID=6603679705
[2025-04-15 14:30:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 17:47:17]  *** The last 200 lines of the pilot log: ***
[2025-04-15 17:47:17] 2025-04-15 21:47:02,051 | INFO     | sum of deviations: 108003505723.53394
[2025-04-15 17:47:17] 2025-04-15 21:47:02,051 | INFO     | mean x: 1744747759.0366492
[2025-04-15 17:47:17] 2025-04-15 21:47:02,051 | INFO     | mean y: 2358470.2094240836
[2025-04-15 17:47:17] 2025-04-15 21:47:02,051 | INFO     | -- intersect: -87214644207.781
[2025-04-15 17:47:17] 2025-04-15 21:47:02,051 | INFO     | intersect: -87214644207.781
[2025-04-15 17:47:17] 2025-04-15 21:47:02,051 | INFO     | chi2: 6.413224880338903
[2025-04-15 17:47:17] 2025-04-15 21:47:02,052 | INFO     | sum of square deviations: 1995299606.236562
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | sum of deviations: 117180284091.2258
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | mean x: 1744747606.5376344
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | mean y: 2366690.9677419355
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | -- intersect: -102463458272.1264
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | intersect: -102463458272.1264
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | chi2: 5.659484122431049
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | current chi2=5.659484122431049 (change=11.752913268620988 %)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | right removable region: 185
[2025-04-15 17:47:17] 2025-04-15 21:47:02,053 | INFO     | sum of square deviations: 1995295336.236562
[2025-04-15 17:47:17] 2025-04-15 21:47:02,057 | INFO     | sum of deviations: 56493977247.77422
[2025-04-15 17:47:17] 2025-04-15 21:47:02,057 | INFO     | mean x: 1744747911.5376344
[2025-04-15 17:47:17] 2025-04-15 21:47:02,058 | INFO     | mean y: 2405885.5322580645
[2025-04-15 17:47:17] 2025-04-15 21:47:02,058 | INFO     | -- intersect: -49397673905.87489
[2025-04-15 17:47:17] 2025-04-15 21:47:02,058 | INFO     | intersect: -49397673905.87489
[2025-04-15 17:47:17] 2025-04-15 21:47:02,058 | INFO     | chi2: 3.2633667674276134
[2025-04-15 17:47:17] 2025-04-15 21:47:02,058 | INFO     | current chi2=3.2633667674276134 (change=49.11504230216292 %)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,058 | INFO     | sum of square deviations: 1838667008.7292817
[2025-04-15 17:47:17] 2025-04-15 21:47:02,059 | INFO     | sum of deviations: 17371746481.729267
[2025-04-15 17:47:17] 2025-04-15 21:47:02,059 | INFO     | mean x: 1744748064.038674
[2025-04-15 17:47:17] 2025-04-15 21:47:02,059 | INFO     | mean y: 2443983.0386740332
[2025-04-15 17:47:17] 2025-04-15 21:47:02,059 | INFO     | -- intersect: -16481955257.862926
[2025-04-15 17:47:17] 2025-04-15 21:47:02,059 | INFO     | intersect: -16481955257.862926
[2025-04-15 17:47:17] 2025-04-15 21:47:02,060 | INFO     | chi2: 1.5926647343092624
[2025-04-15 17:47:17] 2025-04-15 21:47:02,060 | INFO     | current chi2=1.5926647343092624 (change=51.1956562711246 %)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,060 | INFO     | sum of square deviations: 1690457443.721596
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | sum of deviations: -6067578184.397725
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | mean x: 1744748216.5397727
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | mean y: 2467904.0568181816
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | -- intersect: 6264912578.5807
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | intersect: 6264912578.5807
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | chi2: 0.8128883357113791
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | current chi2=0.8128883357113791 (change=48.960486271837475 %)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,061 | INFO     | sum of square deviations: 1550434078.7134514
[2025-04-15 17:47:17] 2025-04-15 21:47:02,062 | INFO     | sum of deviations: -7712706681.906433
[2025-04-15 17:47:17] 2025-04-15 21:47:02,062 | INFO     | mean x: 1744748369.0409358
[2025-04-15 17:47:17] 2025-04-15 21:47:02,062 | INFO     | mean y: 2469652.415204678
[2025-04-15 17:47:17] 2025-04-15 21:47:02,062 | INFO     | -- intersect: 8681801840.026665
[2025-04-15 17:47:17] 2025-04-15 21:47:02,062 | INFO     | intersect: 8681801840.026665
[2025-04-15 17:47:17] 2025-04-15 21:47:02,063 | INFO     | chi2: 0.7986246400733922
[2025-04-15 17:47:17] 2025-04-15 21:47:02,063 | INFO     | current chi2=0.7986246400733922 (change=1.7546931123700265 %)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,063 | INFO     | left removable region: 40
[2025-04-15 17:47:17] 2025-04-15 21:47:02,063 | INFO     | sum of square deviations: 945292361.751725
[2025-04-15 17:47:17] 2025-04-15 21:47:02,064 | INFO     | sum of deviations: 2163050070.9586205
[2025-04-15 17:47:17] 2025-04-15 21:47:02,064 | INFO     | mean x: 1744748796.0413792
[2025-04-15 17:47:17] 2025-04-15 21:47:02,064 | INFO     | mean y: 2483899.0068965517
[2025-04-15 17:47:17] 2025-04-15 21:47:02,064 | INFO     | -- intersect: -3989909523.1600804
[2025-04-15 17:47:17] 2025-04-15 21:47:02,064 | INFO     | intersect: -3989909523.1600804
[2025-04-15 17:47:17] 2025-04-15 21:47:02,064 | INFO     | chi2: 9.251880528248858e-05
[2025-04-15 17:47:17] 2025-04-15 21:47:02,064 | INFO     | -- intersect: -3989909523.1600804
[2025-04-15 17:47:17] 2025-04-15 21:47:02,065 | INFO     | current memory leak: 2.29 B/s (using 145 data points, chi2=0.00)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,065 | INFO     | ..............................
[2025-04-15 17:47:17] 2025-04-15 21:47:02,065 | INFO     | . Timing measurements:
[2025-04-15 17:47:17] 2025-04-15 21:47:02,065 | INFO     | . get job = 0 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,065 | INFO     | . initial setup = 2 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,065 | INFO     | . payload setup = 19 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,065 | INFO     | . stage-in = 0 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,066 | INFO     | . payload execution = 11646 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,066 | INFO     | . stage-out = 3 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,066 | INFO     | . log creation = 0 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,066 | INFO     | ..............................
[2025-04-15 17:47:17] 2025-04-15 21:47:02,151 | INFO     | 
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | job summary report
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | --------------------------------------------------
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | PanDA job id: 6603679705
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | task id: 44075483
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | errors: (none)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | pilot state: finished 
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | transexitcode: 0
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | exeerrorcode: 0
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | exeerrordiag: 
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | exitcode: 0
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | exitmsg: OK
[2025-04-15 17:47:17] 2025-04-15 21:47:02,152 | INFO     | cpuconsumptiontime: 38410 s
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | nevents: 400
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | neventsw: 0
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | pid: 49866
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | pgrp: 49866
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | corecount: 8
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | event service: False
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | sizes: {0: 2417142, 1: 2417341, 11: 2417341, 14: 2417575, 22: 2417603, 11670: 2447220, 11673: 2456161, 11674: 2456217, 11705: 2456415}
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | --------------------------------------------------
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | 
[2025-04-15 17:47:17] 2025-04-15 21:47:02,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-15 17:47:17] 2025-04-15 21:47:02,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,260 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 17:47:17] 2025-04-15 21:47:02,262 | INFO     | job 6603679705 has completed (purged errors)
[2025-04-15 17:47:17] 2025-04-15 21:47:02,263 | INFO     | overall cleanup function is called
[2025-04-15 17:47:17] 2025-04-15 21:47:03,270 | INFO     | --- collectZombieJob: --- 10, [49866]
[2025-04-15 17:47:17] 2025-04-15 21:47:03,270 | INFO     | zombie collector waiting for pid 49866
[2025-04-15 17:47:17] 2025-04-15 21:47:03,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 17:47:17] 2025-04-15 21:47:03,271 | INFO     | collected zombie processes
[2025-04-15 17:47:17] 2025-04-15 21:47:03,271 | INFO     | will attempt to kill all subprocesses of pid=49866
[2025-04-15 17:47:17] 2025-04-15 21:47:03,702 | INFO     | process IDs to be killed: [49866] (in reverse order)
[2025-04-15 17:47:17] 2025-04-15 21:47:03,917 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 17:47:17] 2025-04-15 21:47:03,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 17:47:17] 2025-04-15 21:47:03,941 | INFO     | did not find any defunct processes belonging to 49866
[2025-04-15 17:47:17] 2025-04-15 21:47:03,962 | INFO     | did not find any defunct processes belonging to 49866
[2025-04-15 17:47:17] 2025-04-15 21:47:03,962 | INFO     | ready for new job
[2025-04-15 17:47:17] 2025-04-15 21:47:03,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 17:47:17] 2025-04-15 21:47:03,968 | INFO     | **************************************
[2025-04-15 17:47:17] 2025-04-15 21:47:03,968 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 17:47:17] 2025-04-15 21:47:03,968 | INFO     | **************************************
[2025-04-15 17:47:17] 2025-04-15 21:47:03,968 | INFO     | 
[2025-04-15 17:47:17] 2025-04-15 21:47:03,973 | INFO     | architecture information:
[2025-04-15 17:47:17] 2025-04-15 21:47:03,981 | INFO     | executing command: cat /etc/os-release
[2025-04-15 17:47:17] 2025-04-15 21:47:04,071 | INFO     | cat /etc/os-release:
[2025-04-15 17:47:17] NAME="CentOS Linux"
[2025-04-15 17:47:17] VERSION="7 (Core)"
[2025-04-15 17:47:17] ID="centos"
[2025-04-15 17:47:17] ID_LIKE="rhel fedora"
[2025-04-15 17:47:17] VERSION_ID="7"
[2025-04-15 17:47:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 17:47:17] ANSI_COLOR="0;31"
[2025-04-15 17:47:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 17:47:17] HOME_URL="https://www.centos.org/"
[2025-04-15 17:47:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 17:47:17] 
[2025-04-15 17:47:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 17:47:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 17:47:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 17:47:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 17:47:17] 
[2025-04-15 17:47:17] 2025-04-15 21:47:04,072 | INFO     | **************************************
[2025-04-15 17:47:17] 2025-04-15 21:47:04,575 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-15 17:47:17] 2025-04-15 21:47:04,651 | INFO     | sufficient remaining disk space (103174635520 B)
[2025-04-15 17:47:17] 2025-04-15 21:47:04,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 17:47:17] 2025-04-15 21:47:04,651 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 17:47:17] 2025-04-15 21:47:04,651 | INFO     | update_server=False
[2025-04-15 17:47:17] 2025-04-15 21:47:04,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 17:47:17] 2025-04-15 21:47:04,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 17:47:17] 2025-04-15 21:47:04,652 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 17:47:17] 2025-04-15 21:47:04,653 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 17:47:17] 2025-04-15 21:47:04,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 17:47:17] 2025-04-15 21:47:04,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 17:47:17] 2025-04-15 21:47:04,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 17:47:17] 2025-04-15 21:47:04,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 17:47:17] 2025-04-15 21:47:04,817 | INFO     | aborting loop
[2025-04-15 17:47:17] 2025-04-15 21:47:05,209 | INFO     | all payload control threads have been joined
[2025-04-15 17:47:17] 2025-04-15 21:47:05,209 | INFO     | all data control threads have been joined
[2025-04-15 17:47:17] 2025-04-15 21:47:05,220 | INFO     | all job control threads have been joined
[2025-04-15 17:47:17] 2025-04-15 21:47:05,657 | INFO     | [job] retrieve thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:05,689 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:05,726 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:05,823 | INFO     | [job] job monitor thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:05,956 | INFO     | [job] validate thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,215 | INFO     | [payload] control thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,223 | INFO     | [data] control thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,225 | INFO     | [job] control thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,369 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,658 | INFO     | [data] copytool_out thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,905 | INFO     | [payload] validate_post thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,914 | INFO     | [payload] failed_post thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,916 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:06,921 | INFO     | [data] copytool_in thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:07,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 17:47:17] 2025-04-15 21:47:08,173 | INFO     | [job] queue monitor thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:08,662 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 17:47:17] 2025-04-15 21:47:10,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248462276416)>', '<ExcThread(monitor, started 140248164054784)>']
[2025-04-15 17:47:17] 2025-04-15 21:47:11,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 17:47:17] 2025-04-15 21:47:11,694 | INFO     | [monitor] control thread has ended
[2025-04-15 17:47:17] 2025-04-15 21:47:15,757 | INFO     | all workflow threads have been joined
[2025-04-15 17:47:17] 2025-04-15 21:47:15,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 17:47:17] 2025-04-15 21:47:15,765 | INFO     | traces error code: 0
[2025-04-15 17:47:17] 2025-04-15 21:47:15,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 17:47:17] 2025-04-15 21:47:16,004 [wrapper] ==== pilot stdout END ====
[2025-04-15 17:47:17] 2025-04-15 21:47:16,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 17:47:17] 2025-04-15 21:47:16,021 [wrapper] pilotpid: 93421
[2025-04-15 17:47:17] 2025-04-15 21:47:16,067 [wrapper] Pilot exit status: 0
[2025-04-15 17:47:17] 2025-04-15 21:47:16,239 [wrapper] pandaids: 6603679705 6603679705
[2025-04-15 17:47:17] 2025-04-15 21:47:16,407 [wrapper] cleanup supervisor_pilot 93498 93422
[2025-04-15 17:47:17] 2025-04-15 21:47:16,428 [wrapper] Test setup, not cleaning
[2025-04-15 17:47:17] 2025-04-15 21:47:16,437 [wrapper] apfmon messages muted
[2025-04-15 17:47:17] 2025-04-15 21:47:16,466 [wrapper] ==== wrapper stdout END ====
[2025-04-15 17:47:17] 2025-04-15 21:47:16,496 [wrapper] ==== wrapper stderr END ====
[2025-04-15 17:47:17]  *** Error codes and diagnostics ***
[2025-04-15 17:47:17]     "exeErrorCode": 0,
[2025-04-15 17:47:17]     "exeErrorDiag": "",
[2025-04-15 17:47:17]     "pilotErrorCode": 0,
[2025-04-15 17:47:17]     "pilotErrorDiag": "",
[2025-04-15 17:47:17]  *** Listing of results directory ***
[2025-04-15 17:47:17] total 630080
[2025-04-15 17:47:17] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 02:10 pilot3.tar.gz
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 02:28 queuedata.json
[2025-04-15 17:47:17] -rwx------ 1 boincer umatlas     37140 Apr 15 02:28 runpilot2-wrapper.sh
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas       100 Apr 15 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 17:47:17] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 10:48 run_atlas
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas       105 Apr 15 10:48 job.xml
[2025-04-15 17:47:17] -rw-r--r-- 3 boincer umatlas 222692244 Apr 15 10:48 EVNT.44075481._000974.pool.root.1
[2025-04-15 17:47:17] -rw-r--r-- 3 boincer umatlas 222692244 Apr 15 10:48 ATLAS.root_0
[2025-04-15 17:47:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 10:48 start_atlas.sh
[2025-04-15 17:47:17] drwxrwx--x 2 boincer umatlas      4096 Apr 15 10:48 shared
[2025-04-15 17:47:17] -rw-r--r-- 2 boincer umatlas    508895 Apr 15 10:48 input.tar.gz
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas         0 Apr 15 10:48 boinc_lockfile
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas      2577 Apr 15 14:30 pandaJob.out
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas       467 Apr 15 14:30 setup.sh.local
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas    983993 Apr 15 14:31 agis_schedconf.cvmfs.json
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas      6388 Apr 15 17:38 init_data.xml
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas 193145244 Apr 15 17:45 HITS.44075483._024989.pool.root.1
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas       531 Apr 15 17:45 boinc_task_state.xml
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas      1089 Apr 15 17:46 memory_monitor_summary.json
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas   1603529 Apr 15 17:46 agis_ddmendpoints.agis.ALL.json
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas    371582 Apr 15 17:46 log.44075483._024989.job.log.tgz.1
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas        96 Apr 15 17:46 pilot_heartbeat.json
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas      7762 Apr 15 17:47 heartbeat.json
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas      4477 Apr 15 17:47 pilotlog.txt
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas        28 Apr 15 17:47 wrapper_checkpoint.txt
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 17:47 boinc_mmap_file
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas   1042593 Apr 15 17:47 log.44075483._024989.job.log.1
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas       357 Apr 15 17:47 output.list
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas       620 Apr 15 17:47 runtime_log
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas   1433600 Apr 15 17:47 result.tar.gz
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas     11499 Apr 15 17:47 runtime_log.err
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas       788 Apr 15 17:47 PFCLDmvxoO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm8fXLDm3tRPmn.diag
[2025-04-15 17:47:17] -rw-r--r-- 1 boincer umatlas     22991 Apr 15 17:47 stderr.txt
[2025-04-15 17:47:17] HITS file was successfully produced:
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas 193145244 Apr 15 17:45 shared/HITS.pool.root.1
[2025-04-15 17:47:17]  *** Contents of shared directory: ***
[2025-04-15 17:47:17] total 408020
[2025-04-15 17:47:17] -rw-r--r-- 3 boincer umatlas 222692244 Apr 15 10:48 ATLAS.root_0
[2025-04-15 17:47:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 10:48 start_atlas.sh
[2025-04-15 17:47:17] -rw-r--r-- 2 boincer umatlas    508895 Apr 15 10:48 input.tar.gz
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas 193145244 Apr 15 17:45 HITS.pool.root.1
[2025-04-15 17:47:17] -rw------- 1 boincer umatlas   1433600 Apr 15 17:47 result.tar.gz
17:47:19 (61757): run_atlas exited; CPU time 37869.880546
17:47:19 (61757): called boinc_finish(0)

</stderr_txt>
]]>

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