Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 22:45:05 (1236): Detected: vboxwrapper 26206
2025-04-18 22:45:05 (1236): Detected: BOINC client v8.0.2
2025-04-18 22:45:06 (1236): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-18 22:45:06 (1236): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 22:45:06 (1236): Create VM. (boinc_8cc090b3b19bf7de, slot#1)
2025-04-18 22:45:07 (1236): Setting Memory Size for VM. (4800MB)
2025-04-18 22:45:07 (1236): Setting CPU Count for VM. (8)
2025-04-18 22:45:07 (1236): Setting Chipset Options for VM.
2025-04-18 22:45:08 (1236): Setting Graphics Controller Options for VM.
2025-04-18 22:45:08 (1236): Setting Boot Options for VM.
2025-04-18 22:45:08 (1236): Setting Network Configuration for NAT.
2025-04-18 22:45:09 (1236): Enabling VM Network Access.
2025-04-18 22:45:09 (1236): Disabling USB Support for VM.
2025-04-18 22:45:09 (1236): Disabling COM Port Support for VM.
2025-04-18 22:45:09 (1236): Disabling LPT Port Support for VM.
2025-04-18 22:45:10 (1236): Disabling Audio Support for VM.
2025-04-18 22:45:10 (1236): Disabling Clipboard Support for VM.
2025-04-18 22:45:10 (1236): Disabling Drag and Drop Support for VM.
2025-04-18 22:45:10 (1236): Adding storage controller(s) to VM.
2025-04-18 22:45:11 (1236): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 22:45:13 (1236): Adding VirtualBox Guest Additions to VM.
2025-04-18 22:45:14 (1236): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 22:45:14 (1236): forwarding host port 54834 to guest port 80
2025-04-18 22:45:14 (1236): Enabling remote desktop for VM.
2025-04-18 22:45:15 (1236): Required extension pack not installed, remote desktop not enabled.
2025-04-18 22:45:15 (1236): Enabling shared directory for VM.
2025-04-18 22:45:15 (1236): Starting VM using VBoxManage interface. (boinc_8cc090b3b19bf7de, slot#1)
2025-04-18 22:45:21 (1236): Successfully started VM. (PID = '17668')
2025-04-18 22:45:21 (1236): Reporting VM Process ID to BOINC.
2025-04-18 22:45:21 (1236): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-18 22:45:21 (1236): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 22:45:21 (1236): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 22:45:21 (1236): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 22:45:21 (1236): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 22:45:21 (1236): Detected: Web Application Enabled (http://localhost:54834)
2025-04-18 22:45:21 (1236): Preference change detected
2025-04-18 22:45:21 (1236): Setting CPU throttle for VM. (100%)
2025-04-18 22:45:21 (1236): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 22:45:23 (1236): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 22:45:23 (1236): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 22:45:26 (1236): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 22:45:26 (1236): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 22:45:26 (1236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 22:45:32 (1236): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 22:45:32 (1236): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 22:45:38 (1236): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.000120 main     Log opened 2025-04-18T22:45:36.341872000Z
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.000195 main     OS Product: Linux
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.000225 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.000282 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.000317 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.000318 main     Process ID: 1364
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.000318 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 22:45:38 (1236): Guest Log: 00:00:00.001730 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 22:45:38 (1236): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 22:45:38 (1236): Guest Log: [INFO] Mounting shared directory
2025-04-18 22:45:38 (1236): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 22:45:44 (1236): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 22:45:44 (1236): Guest Log: [INFO] Detected branch: prod
2025-04-18 22:45:45 (1236): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 22:45:45 (1236): Guest Log: Copying input files
2025-04-18 22:45:46 (1236): Guest Log: Copied input files into RunAtlas.
2025-04-18 22:45:46 (1236): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 22:45:46 (1236): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 22:45:46 (1236): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 22:45:46 (1236): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 22:45:48 (1236): Guest Log: 00:00:10.021074 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 634 883 000ns (GuestNow=1 745 009 147 710 449 000 ns GuestLast=1 745 016 336 345 332 000 ns fSetTimeLastLoop=true )
2025-04-18 22:45:56 (1236): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 22:45:57 (1236): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 22:45:57 (1236): Guest Log: 2.6.3.0 1643 0 30000 145014 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 22:45:57 (1236): Guest Log: copied the webapp to /var/www
2025-04-18 22:45:57 (1236): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 22:45:57 (1236): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 22:45:58 (1236): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 22:45:58 (1236): Guest Log:  *** Starting ATLAS job. (PandaID=6603683924 taskID=44075483) ***
2025-04-18 23:29:53 (1236): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 10:42:01 (1236): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 10:42:07 (1236): Guest Log: 00:44:21.659998 timesync vgsvcTimeSyncWorker: Radical host time change: 40 337 823 000 000ns (HostNow=1 745 052 127 170 000 000 ns HostLast=1 745 011 789 347 000 000 ns)
2025-04-19 10:42:17 (1236): Guest Log: 00:44:31.660309 timesync vgsvcTimeSyncWorker: Radical guest time change: 40 337 821 896 000ns (GuestNow=1 745 052 137 170 658 000 ns GuestLast=1 745 011 799 348 762 000 ns fSetTimeLastLoop=true )
2025-04-19 10:43:04 (1236): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 10:45:21 (1236): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 10:54:37 (1236): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 10:56:37 (1236): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 11:42:00 (1236): Status Report: Elapsed Time: '6000.983557'
2025-04-19 11:42:00 (1236): Status Report: CPU Time: '33452.421875'
2025-04-19 12:35:28 (1236): Guest Log:  *** Job finished ***
2025-04-19 12:35:28 (1236): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:02,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:02,928 | INFO     | [job] queue monitor thread has finished
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:06,317 | INFO     | [data] queue_monitor thread has finished
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:08,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888445949760)>', '<ExcThread(monitor, started 139887848171264)>']
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:08,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:08,082 | INFO     | [monitor] control thread has ended
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,004 | INFO     | all workflow threads have been joined
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,004 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,005 | INFO     | traces error code: 0
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,084 [wrapper] ==== pilot stdout END ====
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,089 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,092 [wrapper] pilotpid: 6039
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,096 [wrapper] Pilot exit status: 0
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,359 [wrapper] pandaids: 6603683924
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,408 [wrapper] cleanup supervisor_pilot 10078 6040
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,413 [wrapper] Test setup, not cleaning
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,419 [wrapper] apfmon messages muted
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,423 [wrapper] ==== wrapper stdout END ====
2025-04-19 12:35:28 (1236): Guest Log: 2025-04-19 10:31:13,428 [wrapper] ==== wrapper stderr END ====
2025-04-19 12:35:28 (1236): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 12:35:28 (1236): Guest Log:     "exeErrorCode": 0,
2025-04-19 12:35:28 (1236): Guest Log:     "exeErrorDiag": "",
2025-04-19 12:35:28 (1236): Guest Log:     "pilotErrorCode": 0,
2025-04-19 12:35:28 (1236): Guest Log:     "pilotErrorDiag": "",
2025-04-19 12:35:28 (1236): Guest Log:  *** Listing of results directory ***
2025-04-19 12:35:28 (1236): Guest Log: total 195392
2025-04-19 12:35:28 (1236): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 15 09:34 pilot3.tar.gz
2025-04-19 12:35:28 (1236): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 15 09:37 runpilot2-wrapper.sh
2025-04-19 12:35:28 (1236): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 15 09:37 queuedata.json
2025-04-19 12:35:28 (1236): Guest Log: -rwxr-xr-x. 1 atlas atlas      9117 Apr 18 20:45 init_data.xml
2025-04-19 12:35:28 (1236): Guest Log: -rwxr-xr-x. 1 atlas atlas    508891 Apr 18 20:45 input.tar.gz
2025-04-19 12:35:28 (1236): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 18 20:45 start_atlas.sh
2025-04-19 12:35:28 (1236): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 20:45 EVNT.44075481._001037.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 12:35:28 (1236): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 18 20:45 pandaJob.out
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 20:46 setup.sh.local
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 18 20:49 agis_schedconf.cvmfs.json
2025-04-19 12:35:28 (1236): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 20:50 pilot3
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas        98 Apr 19 10:30 pilot_heartbeat.json
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas 194151560 Apr 19 10:30 HITS.44075483._026564.pool.root.1
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 19 10:30 memory_monitor_summary.json
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 10:30 agis_ddmendpoints.agis.ALL.json
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas    325500 Apr 19 10:30 log.44075483._026564.job.log.tgz.1
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas      7729 Apr 19 10:30 heartbeat.json
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas      4722 Apr 19 10:31 pilotlog.txt
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas    737068 Apr 19 10:31 log.44075483._026564.job.log.1
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 10:31 output.list
2025-04-19 12:35:28 (1236): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 10:31 runtime_log
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas   1085440 Apr 19 10:31 result.tar.gz
2025-04-19 12:35:28 (1236): Guest Log: -rw-r--r--. 1 atlas atlas     10969 Apr 19 10:31 runtime_log.err
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas       667 Apr 19 10:31 kNwMDmvurO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQvXLDmE3u4Bn.diag
2025-04-19 12:35:28 (1236): Guest Log: Looking for outputfile HITS.44075483._026564.pool.root.1
2025-04-19 12:35:28 (1236): Guest Log: HITS file was successfully produced
2025-04-19 12:35:28 (1236): Guest Log: -rw-------. 1 atlas atlas 194151560 Apr 19 10:30 /home/atlas/RunAtlas/HITS.44075483._026564.pool.root.1
2025-04-19 12:35:29 (1236): Guest Log: Successfully finished the ATLAS job!
2025-04-19 12:35:29 (1236): Guest Log: Copying the results back to the shared directory!
2025-04-19 12:35:29 (1236): Guest Log:  *** Contents of shared directory: ***
2025-04-19 12:35:29 (1236): Guest Log: total 409396
2025-04-19 12:35:29 (1236): Guest Log: -rwxrwxrwx. 1 root root 223433066 Apr 18 20:45 ATLAS.root_0
2025-04-19 12:35:29 (1236): Guest Log: -rwxrwxrwx. 1 root root 194151560 Apr 19  2025 HITS.pool.root.1
2025-04-19 12:35:29 (1236): Guest Log: -rwxrwxrwx. 1 root root      9117 Apr 18 20:45 init_data.xml
2025-04-19 12:35:29 (1236): Guest Log: -rwxrwxrwx. 1 root root    508891 Apr 15 13:36 input.tar.gz
2025-04-19 12:35:29 (1236): Guest Log: -rwxrwxrwx. 1 root root   1085440 Apr 19  2025 result.tar.gz
2025-04-19 12:35:29 (1236): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 15 13:36 start_atlas.sh
2025-04-19 12:35:29 (1236): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 12:35:29 (1236): VM Completion File Detected.
2025-04-19 12:35:29 (1236): Powering off VM.
2025-04-19 12:35:30 (1236): Successfully stopped VM.
2025-04-19 12:35:30 (1236): Deregistering VM. (boinc_8cc090b3b19bf7de, slot#1)
2025-04-19 12:35:30 (1236): Removing network bandwidth throttle group from VM.
2025-04-19 12:35:31 (1236): Removing VM from VirtualBox.
12:35:36 (1236): called boinc_finish(0)

</stderr_txt>
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