Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-15 16:45:28 (324061): Detected: vboxwrapper 26206
2025-04-15 16:45:28 (324061): Detected: BOINC client v8.0.4
2025-04-15 16:45:28 (324061): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-15 16:45:28 (324061): Successfully copied 'init_data.xml' to the shared directory.
2025-04-15 16:45:28 (324061): Create VM. (boinc_776c8e28becc6572, slot#2)
2025-04-15 16:45:28 (324061): Setting Memory Size for VM. (4300MB)
2025-04-15 16:45:28 (324061): Setting CPU Count for VM. (3)
2025-04-15 16:45:28 (324061): Setting Chipset Options for VM.
2025-04-15 16:45:28 (324061): Setting Graphics Controller Options for VM.
2025-04-15 16:45:28 (324061): Setting Boot Options for VM.
2025-04-15 16:45:28 (324061): Setting Network Configuration for NAT.
2025-04-15 16:45:28 (324061): Enabling VM Network Access.
2025-04-15 16:45:28 (324061): Disabling USB Support for VM.
2025-04-15 16:45:28 (324061): Disabling COM Port Support for VM.
2025-04-15 16:45:28 (324061): Disabling LPT Port Support for VM.
2025-04-15 16:45:28 (324061): Disabling Audio Support for VM.
2025-04-15 16:45:28 (324061): Disabling Clipboard Support for VM.
2025-04-15 16:45:28 (324061): Disabling Drag and Drop Support for VM.
2025-04-15 16:45:28 (324061): Adding storage controller(s) to VM.
2025-04-15 16:45:28 (324061): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-15 16:45:29 (324061): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-15 16:45:29 (324061): forwarding host port 45353 to guest port 80
2025-04-15 16:45:29 (324061): Enabling remote desktop for VM.
2025-04-15 16:45:29 (324061): Required extension pack not installed, remote desktop not enabled.
2025-04-15 16:45:29 (324061): Enabling shared directory for VM.
2025-04-15 16:45:29 (324061): Starting VM using VBoxManage interface. (boinc_776c8e28becc6572, slot#2)
2025-04-15 16:45:30 (324061): Successfully started VM. (PID = '324303')
2025-04-15 16:45:30 (324061): Reporting VM Process ID to BOINC.
2025-04-15 16:45:30 (324061): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-15 16:45:30 (324061): Guest Log: CPUID EDX: 0x178bfbff
2025-04-15 16:45:30 (324061): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-15 16:45:30 (324061): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-15 16:45:30 (324061): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-15 16:45:30 (324061): Detected: Web Application Enabled (http://localhost:45353)
2025-04-15 16:45:30 (324061): Preference change detected
2025-04-15 16:45:30 (324061): Setting CPU throttle for VM. (100%)
2025-04-15 16:45:30 (324061): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-15 16:45:32 (324061): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-15 16:45:32 (324061): Guest Log: BIOS: Booting from Hard Disk...
2025-04-15 16:45:35 (324061): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-15 16:45:35 (324061): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-15 16:45:35 (324061): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-15 16:45:39 (324061): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-15 16:45:39 (324061): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-15 16:45:42 (324061): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000073 main     Log opened 2025-04-15T14:45:40.950596000Z
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000138 main     OS Product: Linux
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000146 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000153 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000164 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000164 main     Process ID: 1283
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000164 main     Package type: LINUX_64BITS_GENERIC
2025-04-15 16:45:42 (324061): Guest Log: 00:00:00.000588 main     5.2.32 r132073 started. Verbose level = 0
2025-04-15 16:45:43 (324061): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-15 16:45:43 (324061): Guest Log: [INFO] Mounting shared directory
2025-04-15 16:45:43 (324061): Guest Log: [INFO] Checking for init_data.xml
2025-04-15 16:45:43 (324061): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-15 16:45:43 (324061): Guest Log: [INFO] Detected branch: prod
2025-04-15 16:45:44 (324061): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-15 16:45:44 (324061): Guest Log: Copying input files
2025-04-15 16:45:44 (324061): Guest Log: Copied input files into RunAtlas.
2025-04-15 16:45:44 (324061): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-15 16:45:44 (324061): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-15 16:45:44 (324061): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-15 16:45:44 (324061): Guest Log: Further information can be found at the LHC@home message board.
2025-04-15 16:45:53 (324061): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-15 16:45:53 (324061): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-15 16:45:53 (324061): Guest Log: 2.6.3.0 1558 0 30188 144889 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-15 16:45:53 (324061): Guest Log: copied the webapp to /var/www
2025-04-15 16:45:53 (324061): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-15 16:45:53 (324061): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-15 16:45:53 (324061): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-15 16:45:53 (324061): Guest Log:  *** Starting ATLAS job. (PandaID=6603682904 taskID=44075483) ***
2025-04-15 18:07:01 (324061): Guest Log:  *** Job finished ***
2025-04-15 18:07:01 (324061): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:35,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:35,253 | INFO     | [data] copytool_out thread has finished
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:39,260 | INFO     | [data] queue_monitor thread has finished
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:40,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660016387904)>', '<ExcThread(monitor, started 139659797952256)>']
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:41,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:41,588 | INFO     | [monitor] control thread has ended
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,841 | INFO     | all workflow threads have been joined
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,841 | INFO     | end of generic workflow (traces error code: 0)
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,841 | INFO     | traces error code: 0
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,890 [wrapper] ==== pilot stdout END ====
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,893 [wrapper] ==== wrapper stdout RESUME ====
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,896 [wrapper] pilotpid: 5871
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,898 [wrapper] Pilot exit status: 0
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,942 [wrapper] pandaids: 6603682904
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,958 [wrapper] cleanup supervisor_pilot  1566 5872
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,960 [wrapper] Test setup, not cleaning
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,962 [wrapper] apfmon messages muted
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,965 [wrapper] ==== wrapper stdout END ====
2025-04-15 18:07:01 (324061): Guest Log: 2025-04-15 16:08:45,967 [wrapper] ==== wrapper stderr END ====
2025-04-15 18:07:01 (324061): Guest Log:  *** Error codes and diagnostics ***
2025-04-15 18:07:01 (324061): Guest Log:     "exeErrorCode": 0,
2025-04-15 18:07:01 (324061): Guest Log:     "exeErrorDiag": "",
2025-04-15 18:07:01 (324061): Guest Log:     "pilotErrorCode": 0,
2025-04-15 18:07:01 (324061): Guest Log:     "pilotErrorDiag": "",
2025-04-15 18:07:01 (324061): Guest Log:  *** Listing of results directory ***
2025-04-15 18:07:01 (324061): Guest Log: total 199896
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 15 08:24 pilot3.tar.gz
2025-04-15 18:07:01 (324061): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 15 08:54 runpilot2-wrapper.sh
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 15 08:54 queuedata.json
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas    508894 Apr 15 14:45 input.tar.gz
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 15 14:45 start_atlas.sh
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas      7230 Apr 15 14:45 init_data.xml
2025-04-15 18:07:01 (324061): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 15 14:45 EVNT.44075481._001024.pool.root.1 -> /data/./ATLAS.root_0
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 15 14:45 pandaJob.out
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas       424 Apr 15 14:45 setup.sh.local
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas    984001 Apr 15 14:46 agis_schedconf.cvmfs.json
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 15 14:46 agis_ddmendpoints.agis.ALL.json
2025-04-15 18:07:01 (324061): Guest Log: drwx------. 4 atlas atlas      4096 Apr 15 14:46 pilot3
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas        95 Apr 15 16:07 pilot_heartbeat.json
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas 199542938 Apr 15 16:08 HITS.44075483._026246.pool.root.1
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas      1024 Apr 15 16:08 memory_monitor_summary.json
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas    229700 Apr 15 16:08 log.44075483._026246.job.log.tgz.1
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas      7674 Apr 15 16:08 heartbeat.json
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 15 16:08 pilotlog.txt
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas    461981 Apr 15 16:08 log.44075483._026246.job.log.1
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas       357 Apr 15 16:08 output.list
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 15 16:08 runtime_log
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas    706560 Apr 15 16:08 result.tar.gz
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 atlas atlas     10952 Apr 15 16:08 runtime_log.err
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas       659 Apr 15 16:08 56GODm7ErO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmBK1KDmH5KQ7m.diag
2025-04-15 18:07:01 (324061): Guest Log: Looking for outputfile HITS.44075483._026246.pool.root.1
2025-04-15 18:07:01 (324061): Guest Log: HITS file was successfully produced
2025-04-15 18:07:01 (324061): Guest Log: -rw-------. 1 atlas atlas 199542938 Apr 15 16:08 /home/atlas/RunAtlas/HITS.44075483._026246.pool.root.1
2025-04-15 18:07:01 (324061): Guest Log: Successfully finished the ATLAS job!
2025-04-15 18:07:01 (324061): Guest Log: Copying the results back to the shared directory!
2025-04-15 18:07:01 (324061): Guest Log:  *** Contents of shared directory: ***
2025-04-15 18:07:01 (324061): Guest Log: total 220600
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 root root 224643133 Apr 15 14:45 ATLAS.root_0
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 root root      7230 Apr 15 14:45 init_data.xml
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 root root    508894 Apr 15 14:45 input.tar.gz
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 root root    706560 Apr 15 16:07 result.tar.gz
2025-04-15 18:07:01 (324061): Guest Log: -rw-r--r--. 1 root root     17569 Apr 15 14:45 start_atlas.sh
2025-04-15 18:07:01 (324061): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-15 18:07:01 (324061): VM Completion File Detected.
2025-04-15 18:07:01 (324061): Powering off VM.
2025-04-15 18:07:01 (324061): Successfully stopped VM.
2025-04-15 18:07:01 (324061): Deregistering VM. (boinc_776c8e28becc6572, slot#2)
2025-04-15 18:07:01 (324061): Removing network bandwidth throttle group from VM.
2025-04-15 18:07:01 (324061): Removing VM from VirtualBox.
18:07:06 (324061): called boinc_finish(0)

</stderr_txt>
]]>

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