Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:09:59 (1804885): wrapper (7.7.26015): starting
14:09:59 (1804885): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 14:09:59] Arguments: --nthreads 12
[2025-04-15 14:09:59] Threads: 12
[2025-04-15 14:09:59] Checking for CVMFS
[2025-04-15 14:09:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 14:10:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 14:10:00] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 14:10:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 14:10:00] 2.11.5.0 2439 17540 203476 144902 1 447 38238037 45568000 16063 130560 0 137719904 99.672 152845540 22922 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-15 14:10:00] CVMFS is ok
[2025-04-15 14:10:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 14:10:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 14:10:01] Further information can be found at the LHC@home message board.
[2025-04-15 14:10:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 14:10:01] Checking for apptainer binary...
[2025-04-15 14:10:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 14:10:01] Running /usr/bin/apptainer --version
[2025-04-15 14:10:01] apptainer version 1.3.5-1.el9
[2025-04-15 14:10:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 14:10:02] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0071.triumf.lcg
[2025-04-15 14:10:02] apptainer works
[2025-04-15 14:10:02] Set ATHENA_PROC_NUMBER=12
[2025-04-15 14:10:02] Set ATHENA_CORE_NUMBER=12
[2025-04-15 14:10:02] Starting ATLAS job with PandaID=6603678260
[2025-04-15 14:10:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 15:35:20]  *** The last 200 lines of the pilot log: ***
[2025-04-15 15:35:20]  lfn=log.44075483._024204.job.log.tgz.1
[2025-04-15 15:35:20]  mtime=0
[2025-04-15 15:35:20]  protocol_id=None
[2025-04-15 15:35:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-15 15:35:20]  replicas=None
[2025-04-15 15:35:20]  scope=mc23_13p6TeV
[2025-04-15 15:35:20]  status=None
[2025-04-15 15:35:20]  status_code=0
[2025-04-15 15:35:20]  storage_token=
[2025-04-15 15:35:20]  surl=/home/boinc/slots/0/PanDA_Pilot-6603678260/log.44075483._024204.job.log.tgz.1
[2025-04-15 15:35:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/c1/log.44075483._024204.job.log.tgz.1
[2025-04-15 15:35:20]  workdir=None
[2025-04-15 15:35:20] ]
[2025-04-15 15:35:20] 2025-04-15 22:34:52,631 | INFO     | transferring file log.44075483._024204.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6603678260/log.44075483._024204.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-15 15:35:20] 2025-04-15 22:34:52,631 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6603678260/log.44075483._024204.job.log.tgz.1 /home/boinc/slots/0/log.44075483._024204.job.log.t
[2025-04-15 15:35:20] 2025-04-15 22:34:52,643 | INFO     | adding to output.list: log.44075483._024204.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/c1/log.44075483._024204.job.log.tg
[2025-04-15 15:35:20] 2025-04-15 22:34:52,643 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 15:35:20] 2025-04-15 22:34:52,643 | INFO     | summary of transferred files:
[2025-04-15 15:35:20] 2025-04-15 22:34:52,643 | INFO     |  -- lfn=log.44075483._024204.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 15:35:20] 2025-04-15 22:34:52,644 | INFO     | stage-out finished correctly
[2025-04-15 15:35:20] 2025-04-15 22:34:53,294 | INFO     | PID=1808677 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-15 15:35:20] 2025-04-15 22:34:53,294 | INFO     | .. there are 28 such processes running
[2025-04-15 15:35:20] 2025-04-15 22:34:53,355 | WARNING  | process 1815023 can no longer be monitored (due to stat problems) - aborting
[2025-04-15 15:35:20] 2025-04-15 22:34:53,355 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6603678260/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 15:35:20] 2025-04-15 22:34:53,525 | INFO     | number of running child processes to parent process 1815023: 1
[2025-04-15 15:35:20] 2025-04-15 22:34:53,525 | INFO     | maximum number of monitored processes: 6
[2025-04-15 15:35:20] 2025-04-15 22:34:54,911 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 15:35:20] 2025-04-15 22:34:56,029 | INFO     | monitor loop #357: job 0:6603678260 is in state 'finished'
[2025-04-15 15:35:20] 2025-04-15 22:34:56,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 15:35:20] 2025-04-15 22:34:56,961 | INFO     | job 6603678260 has state=finished
[2025-04-15 15:35:20] 2025-04-15 22:34:56,961 | INFO     | preparing for final server update for job 6603678260 in state='finished'
[2025-04-15 15:35:20] 2025-04-15 22:34:56,961 | INFO     | this job has now completed (state=finished)
[2025-04-15 15:35:20] 2025-04-15 22:34:56,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 15:35:20] 2025-04-15 22:34:56,961 | INFO     | log transfer has been attempted: DONE
[2025-04-15 15:35:20] 2025-04-15 22:34:56,961 | INFO     | job 6603678260 has finished - writing final server update
[2025-04-15 15:35:20] 2025-04-15 22:34:56,962 | INFO     | total number of processed events: 400 (read)
[2025-04-15 15:35:20] 2025-04-15 22:34:56,980 | INFO     | executing command: lscpu
[2025-04-15 15:35:20] 2025-04-15 22:34:57,035 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 15:35:20] 2025-04-15 22:34:58,532 | INFO     | monitor loop #358: job 0:6603678260 is in state 'finished'
[2025-04-15 15:35:20] 2025-04-15 22:34:58,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 15:35:20] 2025-04-15 22:35:00,725 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-15 15:35:20] 2025-04-15 22:35:00,725 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6603678260/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 15:35:20] 2025-04-15 22:35:00,725 | INFO     | extracted standard info from prmon json
[2025-04-15 15:35:20] 2025-04-15 22:35:00,726 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 15:35:20] 2025-04-15 22:35:00,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 15:35:20] 2025-04-15 22:35:00,726 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 15:35:20] 2025-04-15 22:35:00,726 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 15:35:20] 2025-04-15 22:35:00,727 | INFO     | fitting pss+swap vs Time
[2025-04-15 15:35:20] 2025-04-15 22:35:00,727 | INFO     | sum of square deviations: 136095032.35526344
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | sum of deviations: 30178449507.947365
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | mean x: 1744754063.5921052
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | mean y: 2529514.5789473685
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | -- intersect: -386888685400.98114
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | intersect: -386888685400.98114
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | chi2: 2.4584530420242996
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | -- intersect: -386888685400.98114
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | current memory leak: 221.75 B/s (using 76 data points, chi2=2.46)
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | ..............................
[2025-04-15 15:35:20] 2025-04-15 22:35:00,728 | INFO     | . Timing measurements:
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | . get job = 0 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | . initial setup = 5 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | . payload setup = 11 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | . stage-in = 0 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | . payload execution = 5029 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | . stage-out = 0 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | . log creation = 0 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,729 | INFO     | ..............................
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | 
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | job summary report
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | --------------------------------------------------
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | PanDA job id: 6603678260
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | task id: 44075483
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | errors: (none)
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | pilot state: finished 
[2025-04-15 15:35:20] 2025-04-15 22:35:00,782 | INFO     | transexitcode: 0
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | exeerrorcode: 0
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | exeerrordiag: 
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | exitcode: 0
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | exitmsg: OK
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | cpuconsumptiontime: 26046 s
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | nevents: 400
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | neventsw: 0
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | pid: 1815023
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | pgrp: 1815023
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | corecount: 12
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | event service: False
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | sizes: {0: 2417189, 1: 2417388, 10: 2417594, 12: 2417622, 5044: 2443775, 5046: 2452710, 5048: 2452894, 5054: 2453064}
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | --------------------------------------------------
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | 
[2025-04-15 15:35:20] 2025-04-15 22:35:00,783 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-15 15:35:20] 2025-04-15 22:35:00,796 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 15:35:20] 2025-04-15 22:35:00,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 15:35:20] 2025-04-15 22:35:00,798 | INFO     | job 6603678260 has completed (purged errors)
[2025-04-15 15:35:20] 2025-04-15 22:35:00,798 | INFO     | overall cleanup function is called
[2025-04-15 15:35:20] 2025-04-15 22:35:01,805 | INFO     | --- collectZombieJob: --- 10, [1815023]
[2025-04-15 15:35:20] 2025-04-15 22:35:01,805 | INFO     | zombie collector waiting for pid 1815023
[2025-04-15 15:35:20] 2025-04-15 22:35:01,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 15:35:20] 2025-04-15 22:35:01,805 | INFO     | collected zombie processes
[2025-04-15 15:35:20] 2025-04-15 22:35:01,805 | INFO     | will attempt to kill all subprocesses of pid=1815023
[2025-04-15 15:35:20] 2025-04-15 22:35:01,978 | INFO     | process IDs to be killed: [1815023] (in reverse order)
[2025-04-15 15:35:20] 2025-04-15 22:35:02,046 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 15:35:20] 2025-04-15 22:35:02,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 15:35:20] 2025-04-15 22:35:02,053 | INFO     | did not find any defunct processes belonging to 1815023
[2025-04-15 15:35:20] 2025-04-15 22:35:02,061 | INFO     | did not find any defunct processes belonging to 1815023
[2025-04-15 15:35:20] 2025-04-15 22:35:02,061 | INFO     | ready for new job
[2025-04-15 15:35:20] 2025-04-15 22:35:02,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 15:35:20] 2025-04-15 22:35:02,062 | INFO     | **************************************
[2025-04-15 15:35:20] 2025-04-15 22:35:02,062 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 15:35:20] 2025-04-15 22:35:02,062 | INFO     | **************************************
[2025-04-15 15:35:20] 2025-04-15 22:35:02,063 | INFO     | 
[2025-04-15 15:35:20] 2025-04-15 22:35:02,064 | INFO     | architecture information:
[2025-04-15 15:35:20] 2025-04-15 22:35:02,065 | INFO     | executing command: cat /etc/os-release
[2025-04-15 15:35:20] 2025-04-15 22:35:02,074 | INFO     | cat /etc/os-release:
[2025-04-15 15:35:20] NAME="CentOS Linux"
[2025-04-15 15:35:20] VERSION="7 (Core)"
[2025-04-15 15:35:20] ID="centos"
[2025-04-15 15:35:20] ID_LIKE="rhel fedora"
[2025-04-15 15:35:20] VERSION_ID="7"
[2025-04-15 15:35:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 15:35:20] ANSI_COLOR="0;31"
[2025-04-15 15:35:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 15:35:20] HOME_URL="https://www.centos.org/"
[2025-04-15 15:35:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 15:35:20] 
[2025-04-15 15:35:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 15:35:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 15:35:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 15:35:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 15:35:20] 
[2025-04-15 15:35:20] 2025-04-15 22:35:02,075 | INFO     | **************************************
[2025-04-15 15:35:20] 2025-04-15 22:35:02,578 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-15 15:35:20] 2025-04-15 22:35:02,587 | INFO     | sufficient remaining disk space (1939413663744 B)
[2025-04-15 15:35:20] 2025-04-15 22:35:02,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 15:35:20] 2025-04-15 22:35:02,588 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 15:35:20] 2025-04-15 22:35:02,588 | INFO     | update_server=False
[2025-04-15 15:35:20] 2025-04-15 22:35:02,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 15:35:20] 2025-04-15 22:35:02,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:35:20] 2025-04-15 22:35:02,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:35:20] 2025-04-15 22:35:02,588 | INFO     | aborting loop
[2025-04-15 15:35:20] 2025-04-15 22:35:02,900 | INFO     | all payload control threads have been joined
[2025-04-15 15:35:20] 2025-04-15 22:35:03,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 15:35:20] 2025-04-15 22:35:03,324 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 15:35:20] 2025-04-15 22:35:03,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 15:35:20] 2025-04-15 22:35:03,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 15:35:20] 2025-04-15 22:35:03,568 | INFO     | all data control threads have been joined
[2025-04-15 15:35:20] 2025-04-15 22:35:03,594 | INFO     | [job] queue monitor thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:03,594 | INFO     | [job] retrieve thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:03,599 | INFO     | [job] job monitor thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:03,645 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:03,894 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:03,905 | INFO     | [payload] control thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:03,916 | INFO     | [job] validate thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:04,114 | INFO     | [data] copytool_in thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:04,286 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:04,294 | INFO     | all job control threads have been joined
[2025-04-15 15:35:20] 2025-04-15 22:35:04,471 | INFO     | [payload] failed_post thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:04,573 | INFO     | [data] control thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:04,781 | INFO     | [payload] validate_post thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:05,223 | INFO     | [data] copytool_out thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:05,300 | INFO     | [job] control thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:05,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 15:35:20] 2025-04-15 22:35:09,535 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:13,471 | INFO     | job.realtimelogging is not enabled
[2025-04-15 15:35:20] 2025-04-15 22:35:14,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 15:35:20] 2025-04-15 22:35:15,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952951342912)>', '<ExcThread(monitor, started 139952532723456)>']
[2025-04-15 15:35:20] 2025-04-15 22:35:15,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 15:35:20] 2025-04-15 22:35:15,386 | INFO     | [monitor] control thread has ended
[2025-04-15 15:35:20] 2025-04-15 22:35:20,210 | INFO     | all workflow threads have been joined
[2025-04-15 15:35:20] 2025-04-15 22:35:20,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 15:35:20] 2025-04-15 22:35:20,210 | INFO     | traces error code: 0
[2025-04-15 15:35:20] 2025-04-15 22:35:20,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 15:35:20] 2025-04-15 22:35:20,368 [wrapper] ==== pilot stdout END ====
[2025-04-15 15:35:20] 2025-04-15 22:35:20,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 15:35:20] 2025-04-15 22:35:20,372 [wrapper] pilotpid: 1808677
[2025-04-15 15:35:20] 2025-04-15 22:35:20,374 [wrapper] Pilot exit status: 0
[2025-04-15 15:35:20] 2025-04-15 22:35:20,382 [wrapper] pandaids: 6603678260
[2025-04-15 15:35:20] 2025-04-15 22:35:20,426 [wrapper] cleanup supervisor_pilot 2054398 1808678
[2025-04-15 15:35:20] 2025-04-15 22:35:20,428 [wrapper] Test setup, not cleaning
[2025-04-15 15:35:20] 2025-04-15 22:35:20,430 [wrapper] apfmon messages muted
[2025-04-15 15:35:20] 2025-04-15 22:35:20,433 [wrapper] ==== wrapper stdout END ====
[2025-04-15 15:35:20] 2025-04-15 22:35:20,434 [wrapper] ==== wrapper stderr END ====
[2025-04-15 15:35:20]  *** Error codes and diagnostics ***
[2025-04-15 15:35:20]     "exeErrorCode": 0,
[2025-04-15 15:35:20]     "exeErrorDiag": "",
[2025-04-15 15:35:20]     "pilotErrorCode": 0,
[2025-04-15 15:35:20]     "pilotErrorDiag": "",
[2025-04-15 15:35:20]  *** Listing of results directory ***
[2025-04-15 15:35:20] total 417460
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc    503527 Apr  3 00:42 pilot3.tar.gz
[2025-04-15 15:35:20] -rwx------. 1 boinc boinc     37140 Apr 14 21:56 runpilot2-wrapper.sh
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc      5111 Apr 14 21:56 queuedata.json
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc       100 Apr 15 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 15:35:20] -rwxr-xr-x. 1 boinc boinc      7986 Apr 15 14:09 run_atlas
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc       105 Apr 15 14:09 job.xml
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc      6602 Apr 15 14:09 init_data.xml
[2025-04-15 15:35:20] -rw-r--r--. 2 boinc boinc 226520030 Apr 15 14:09 EVNT.44075481._000942.pool.root.1
[2025-04-15 15:35:20] drwxrwx--x. 2 boinc boinc      4096 Apr 15 14:09 shared
[2025-04-15 15:35:20] -rw-r--r--. 2 boinc boinc    517104 Apr 15 14:09 input.tar.gz
[2025-04-15 15:35:20] -rw-r--r--. 2 boinc boinc     17569 Apr 15 14:09 start_atlas.sh
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc         0 Apr 15 14:09 boinc_lockfile
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc      2577 Apr 15 14:10 pandaJob.out
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc       424 Apr 15 14:10 setup.sh.local
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc    984001 Apr 15 14:10 agis_schedconf.cvmfs.json
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc   1603529 Apr 15 14:10 agis_ddmendpoints.agis.ALL.json
[2025-04-15 15:35:20] drwx------. 4 boinc boinc      4096 Apr 15 14:10 pilot3
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc 195378879 Apr 15 15:34 HITS.44075483._024204.pool.root.1
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc       529 Apr 15 15:34 boinc_task_state.xml
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc        95 Apr 15 15:34 pilot_heartbeat.json
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc      1042 Apr 15 15:34 memory_monitor_summary.json
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc    381022 Apr 15 15:34 log.44075483._024204.job.log.tgz.1
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc      7744 Apr 15 15:35 heartbeat.json
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc        27 Apr 15 15:35 wrapper_checkpoint.txt
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc      8192 Apr 15 15:35 boinc_mmap_file
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc      4424 Apr 15 15:35 pilotlog.txt
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc    480384 Apr 15 15:35 log.44075483._024204.job.log.1
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc       357 Apr 15 15:35 output.list
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc       620 Apr 15 15:35 runtime_log
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc    880640 Apr 15 15:35 result.tar.gz
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc     11144 Apr 15 15:35 runtime_log.err
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc       659 Apr 15 15:35 PJVMDmbWnO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCaXLDmA6ILKm.diag
[2025-04-15 15:35:20] -rw-r--r--. 1 boinc boinc     21833 Apr 15 15:35 stderr.txt
[2025-04-15 15:35:20] HITS file was successfully produced:
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc 195378879 Apr 15 15:34 shared/HITS.pool.root.1
[2025-04-15 15:35:20]  *** Contents of shared directory: ***
[2025-04-15 15:35:20] total 413408
[2025-04-15 15:35:20] -rw-r--r--. 2 boinc boinc 226520030 Apr 15 14:09 ATLAS.root_0
[2025-04-15 15:35:20] -rw-r--r--. 2 boinc boinc    517104 Apr 15 14:09 input.tar.gz
[2025-04-15 15:35:20] -rw-r--r--. 2 boinc boinc     17569 Apr 15 14:09 start_atlas.sh
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc 195378879 Apr 15 15:34 HITS.pool.root.1
[2025-04-15 15:35:20] -rw-------. 1 boinc boinc    880640 Apr 15 15:35 result.tar.gz
15:35:21 (1804885): run_atlas exited; CPU time 26090.642082
15:35:21 (1804885): called boinc_finish(0)

</stderr_txt>
]]>

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