Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:17:23 (18624): wrapper (7.7.26015): starting
08:17:23 (18624): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 08:17:24] Arguments: --nthreads 12
[2025-04-15 08:17:24] Threads: 12
[2025-04-15 08:17:24] Checking for CVMFS
[2025-04-15 08:17:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 08:17:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 08:17:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 08:17:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 08:17:24] 2.11.2.0 13814 393608 162856 144888 2 55 15056114 20275201 1 130560 0 18925683 99.990 5726231 53438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 08:17:24] CVMFS is ok
[2025-04-15 08:17:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 08:17:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 08:17:24] Further information can be found at the LHC@home message board.
[2025-04-15 08:17:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 08:17:24] Checking for apptainer binary...
[2025-04-15 08:17:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 08:17:24] Running /usr/bin/apptainer --version
[2025-04-15 08:17:24] apptainer version 1.3.2-1.el7
[2025-04-15 08:17:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 08:17:25] c-205-7.aglt2.org
[2025-04-15 08:17:25] apptainer works
[2025-04-15 08:17:25] Set ATHENA_PROC_NUMBER=12
[2025-04-15 08:17:25] Set ATHENA_CORE_NUMBER=12
[2025-04-15 08:17:25] Starting ATLAS job with PandaID=6603681356
[2025-04-15 08:17:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 09:43:02]  *** The last 200 lines of the pilot log: ***
[2025-04-15 09:43:02]  is_altstaged=None
[2025-04-15 09:43:02]  is_tar=False
[2025-04-15 09:43:02]  lfn=log.44075483._025844.job.log.tgz.1
[2025-04-15 09:43:02]  mtime=0
[2025-04-15 09:43:02]  protocol_id=None
[2025-04-15 09:43:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-15 09:43:02]  replicas=None
[2025-04-15 09:43:02]  scope=mc23_13p6TeV
[2025-04-15 09:43:02]  status=None
[2025-04-15 09:43:02]  status_code=0
[2025-04-15 09:43:02]  storage_token=
[2025-04-15 09:43:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603681356/log.44075483._025844.job.log.tgz.1
[2025-04-15 09:43:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/cc/log.44075483._025844.job.log.tgz.1
[2025-04-15 09:43:02]  workdir=None
[2025-04-15 09:43:02] ]
[2025-04-15 09:43:02] 2025-04-15 13:42:35,395 | INFO     | transferring file log.44075483._025844.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603681356/log.44075483._025844.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-15 09:43:02] 2025-04-15 13:42:35,395 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603681356/log.44075483._025844.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._025844.job
[2025-04-15 09:43:02] 2025-04-15 13:42:35,418 | INFO     | adding to output.list: log.44075483._025844.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/cc/log.44075483._025844.job.log.tg
[2025-04-15 09:43:02] 2025-04-15 13:42:35,419 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 09:43:02] 2025-04-15 13:42:35,420 | INFO     | summary of transferred files:
[2025-04-15 09:43:02] 2025-04-15 13:42:35,420 | INFO     |  -- lfn=log.44075483._025844.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 09:43:02] 2025-04-15 13:42:35,420 | INFO     | stage-out finished correctly
[2025-04-15 09:43:02] 2025-04-15 13:42:36,139 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 09:43:02] 2025-04-15 13:42:37,473 | INFO     | monitor loop #381: job 0:6603681356 is in state 'finished'
[2025-04-15 09:43:02] 2025-04-15 13:42:37,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 09:43:02] 2025-04-15 13:42:38,034 | INFO     | job 6603681356 has state=finished
[2025-04-15 09:43:02] 2025-04-15 13:42:38,034 | INFO     | preparing for final server update for job 6603681356 in state='finished'
[2025-04-15 09:43:02] 2025-04-15 13:42:38,035 | INFO     | this job has now completed (state=finished)
[2025-04-15 09:43:02] 2025-04-15 13:42:38,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 09:43:02] 2025-04-15 13:42:38,035 | INFO     | log transfer has been attempted: DONE
[2025-04-15 09:43:02] 2025-04-15 13:42:38,035 | INFO     | job 6603681356 has finished - writing final server update
[2025-04-15 09:43:02] 2025-04-15 13:42:38,036 | INFO     | total number of processed events: 400 (read)
[2025-04-15 09:43:02] 2025-04-15 13:42:38,037 | INFO     | executing command: lscpu
[2025-04-15 09:43:02] 2025-04-15 13:42:38,065 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 09:43:02] 2025-04-15 13:42:39,591 | INFO     | PID=22222 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-15 09:43:02] 2025-04-15 13:42:39,976 | INFO     | monitor loop #382: job 0:6603681356 is in state 'finished'
[2025-04-15 09:43:02] 2025-04-15 13:42:39,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 09:43:02] 2025-04-15 13:42:42,479 | INFO     | monitor loop #383: job 0:6603681356 is in state 'finished'
[2025-04-15 09:43:02] 2025-04-15 13:42:42,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 09:43:02] 2025-04-15 13:42:42,940 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-15 09:43:02] 2025-04-15 13:42:42,941 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603681356/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 09:43:02] 2025-04-15 13:42:42,941 | INFO     | extracted standard info from prmon json
[2025-04-15 09:43:02] 2025-04-15 13:42:42,941 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 09:43:02] 2025-04-15 13:42:42,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 09:43:02] 2025-04-15 13:42:42,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 09:43:02] 2025-04-15 13:42:42,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 09:43:02] 2025-04-15 13:42:42,944 | INFO     | fitting pss+swap vs Time
[2025-04-15 09:43:02] 2025-04-15 13:42:42,944 | INFO     | sum of square deviations: 136095575.0
[2025-04-15 09:43:02] 2025-04-15 13:42:42,945 | INFO     | sum of deviations: 22593762824.5
[2025-04-15 09:43:02] 2025-04-15 13:42:42,945 | INFO     | mean x: 1744722080.5
[2025-04-15 09:43:02] 2025-04-15 13:42:42,945 | INFO     | mean y: 2689430.6710526315
[2025-04-15 09:43:02] 2025-04-15 13:42:42,945 | INFO     | -- intersect: -289645499950.1019
[2025-04-15 09:43:02] 2025-04-15 13:42:42,945 | INFO     | intersect: -289645499950.1019
[2025-04-15 09:43:02] 2025-04-15 13:42:42,945 | INFO     | chi2: 2.4053584461644237
[2025-04-15 09:43:02] 2025-04-15 13:42:42,945 | INFO     | -- intersect: -289645499950.1019
[2025-04-15 09:43:02] 2025-04-15 13:42:42,946 | INFO     | current memory leak: 166.01 B/s (using 76 data points, chi2=2.41)
[2025-04-15 09:43:02] 2025-04-15 13:42:42,946 | INFO     | ..............................
[2025-04-15 09:43:02] 2025-04-15 13:42:42,946 | INFO     | . Timing measurements:
[2025-04-15 09:43:02] 2025-04-15 13:42:42,946 | INFO     | . get job = 0 s
[2025-04-15 09:43:02] 2025-04-15 13:42:42,946 | INFO     | . initial setup = 2 s
[2025-04-15 09:43:02] 2025-04-15 13:42:42,947 | INFO     | . payload setup = 7 s
[2025-04-15 09:43:02] 2025-04-15 13:42:42,947 | INFO     | . stage-in = 0 s
[2025-04-15 09:43:02] 2025-04-15 13:42:42,947 | INFO     | . payload execution = 5067 s
[2025-04-15 09:43:02] 2025-04-15 13:42:42,947 | INFO     | . stage-out = 0 s
[2025-04-15 09:43:02] 2025-04-15 13:42:42,947 | INFO     | . log creation = 0 s
[2025-04-15 09:43:02] 2025-04-15 13:42:42,947 | INFO     | ..............................
[2025-04-15 09:43:02] 2025-04-15 13:42:43,211 | INFO     | 
[2025-04-15 09:43:02] 2025-04-15 13:42:43,212 | INFO     | job summary report
[2025-04-15 09:43:02] 2025-04-15 13:42:43,212 | INFO     | --------------------------------------------------
[2025-04-15 09:43:02] 2025-04-15 13:42:43,212 | INFO     | PanDA job id: 6603681356
[2025-04-15 09:43:02] 2025-04-15 13:42:43,212 | INFO     | task id: 44075483
[2025-04-15 09:43:02] 2025-04-15 13:42:43,212 | INFO     | errors: (none)
[2025-04-15 09:43:02] 2025-04-15 13:42:43,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 09:43:02] 2025-04-15 13:42:43,213 | INFO     | pilot state: finished 
[2025-04-15 09:43:02] 2025-04-15 13:42:43,213 | INFO     | transexitcode: 0
[2025-04-15 09:43:02] 2025-04-15 13:42:43,213 | INFO     | exeerrorcode: 0
[2025-04-15 09:43:02] 2025-04-15 13:42:43,213 | INFO     | exeerrordiag: 
[2025-04-15 09:43:02] 2025-04-15 13:42:43,213 | INFO     | exitcode: 0
[2025-04-15 09:43:02] 2025-04-15 13:42:43,213 | INFO     | exitmsg: OK
[2025-04-15 09:43:02] 2025-04-15 13:42:43,214 | INFO     | cpuconsumptiontime: 47372 s
[2025-04-15 09:43:02] 2025-04-15 13:42:43,214 | INFO     | nevents: 400
[2025-04-15 09:43:02] 2025-04-15 13:42:43,214 | INFO     | neventsw: 0
[2025-04-15 09:43:02] 2025-04-15 13:42:43,214 | INFO     | pid: 29627
[2025-04-15 09:43:02] 2025-04-15 13:42:43,214 | INFO     | pgrp: 29627
[2025-04-15 09:43:02] 2025-04-15 13:42:43,214 | INFO     | corecount: 12
[2025-04-15 09:43:02] 2025-04-15 13:42:43,215 | INFO     | event service: False
[2025-04-15 09:43:02] 2025-04-15 13:42:43,215 | INFO     | sizes: {0: 2417365, 1: 2417393, 5: 2417599, 11: 2417655, 5078: 2443781, 5081: 2452906, 5088: 2453020}
[2025-04-15 09:43:02] 2025-04-15 13:42:43,215 | INFO     | --------------------------------------------------
[2025-04-15 09:43:02] 2025-04-15 13:42:43,215 | INFO     | 
[2025-04-15 09:43:02] 2025-04-15 13:42:43,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 09:43:02] 2025-04-15 13:42:43,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 09:43:02] 2025-04-15 13:42:43,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,326 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 09:43:02] 2025-04-15 13:42:43,326 | INFO     | job 6603681356 has completed (purged errors)
[2025-04-15 09:43:02] 2025-04-15 13:42:43,326 | INFO     | overall cleanup function is called
[2025-04-15 09:43:02] 2025-04-15 13:42:44,334 | INFO     | --- collectZombieJob: --- 10, [29627]
[2025-04-15 09:43:02] 2025-04-15 13:42:44,334 | INFO     | zombie collector waiting for pid 29627
[2025-04-15 09:43:02] 2025-04-15 13:42:44,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 09:43:02] 2025-04-15 13:42:44,334 | INFO     | collected zombie processes
[2025-04-15 09:43:02] 2025-04-15 13:42:44,335 | INFO     | will attempt to kill all subprocesses of pid=29627
[2025-04-15 09:43:02] 2025-04-15 13:42:44,425 | INFO     | process IDs to be killed: [29627] (in reverse order)
[2025-04-15 09:43:02] 2025-04-15 13:42:44,479 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 09:43:02] 2025-04-15 13:42:44,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 09:43:02] 2025-04-15 13:42:44,483 | INFO     | did not find any defunct processes belonging to 29627
[2025-04-15 09:43:02] 2025-04-15 13:42:44,486 | INFO     | did not find any defunct processes belonging to 29627
[2025-04-15 09:43:02] 2025-04-15 13:42:44,486 | INFO     | ready for new job
[2025-04-15 09:43:02] 2025-04-15 13:42:44,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 09:43:02] 2025-04-15 13:42:44,488 | INFO     | **************************************
[2025-04-15 09:43:02] 2025-04-15 13:42:44,488 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 09:43:02] 2025-04-15 13:42:44,488 | INFO     | **************************************
[2025-04-15 09:43:02] 2025-04-15 13:42:44,488 | INFO     | 
[2025-04-15 09:43:02] 2025-04-15 13:42:44,489 | INFO     | architecture information:
[2025-04-15 09:43:02] 2025-04-15 13:42:44,489 | INFO     | executing command: cat /etc/os-release
[2025-04-15 09:43:02] 2025-04-15 13:42:44,505 | INFO     | cat /etc/os-release:
[2025-04-15 09:43:02] NAME="CentOS Linux"
[2025-04-15 09:43:02] VERSION="7 (Core)"
[2025-04-15 09:43:02] ID="centos"
[2025-04-15 09:43:02] ID_LIKE="rhel fedora"
[2025-04-15 09:43:02] VERSION_ID="7"
[2025-04-15 09:43:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 09:43:02] ANSI_COLOR="0;31"
[2025-04-15 09:43:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 09:43:02] HOME_URL="https://www.centos.org/"
[2025-04-15 09:43:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 09:43:02] 
[2025-04-15 09:43:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 09:43:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 09:43:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 09:43:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 09:43:02] 
[2025-04-15 09:43:02] 2025-04-15 13:42:44,505 | INFO     | **************************************
[2025-04-15 09:43:02] 2025-04-15 13:42:44,603 | INFO     | 5108s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-15 09:43:02] 2025-04-15 13:42:45,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 09:43:02] 2025-04-15 13:42:45,025 | INFO     | sufficient remaining disk space (29384245248 B)
[2025-04-15 09:43:02] 2025-04-15 13:42:45,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 09:43:02] 2025-04-15 13:42:45,026 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 09:43:02] 2025-04-15 13:42:45,026 | INFO     | update_server=False
[2025-04-15 09:43:02] 2025-04-15 13:42:45,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 09:43:02] 2025-04-15 13:42:45,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 09:43:02] 2025-04-15 13:42:45,040 | INFO     | all payload control threads have been joined
[2025-04-15 09:43:02] 2025-04-15 13:42:45,398 | INFO     | all data control threads have been joined
[2025-04-15 09:43:02] 2025-04-15 13:42:45,608 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 09:43:02] 2025-04-15 13:42:45,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 09:43:02] 2025-04-15 13:42:45,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 09:43:02] 2025-04-15 13:42:45,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 09:43:02] 2025-04-15 13:42:45,987 | INFO     | aborting loop
[2025-04-15 09:43:02] 2025-04-15 13:42:46,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 09:43:02] 2025-04-15 13:42:46,031 | INFO     | [job] retrieve thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,032 | INFO     | [job] queue monitor thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,045 | INFO     | [payload] control thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,105 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,106 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,140 | INFO     | all job control threads have been joined
[2025-04-15 09:43:02] 2025-04-15 13:42:46,178 | INFO     | [payload] failed_post thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,362 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,403 | INFO     | [data] control thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,719 | INFO     | [data] copytool_in thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:46,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 09:43:02] 2025-04-15 13:42:46,991 | INFO     | [job] job monitor thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:47,005 | INFO     | [payload] validate_post thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:47,145 | INFO     | [job] control thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:47,297 | INFO     | [job] validate thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:48,031 | INFO     | [data] copytool_out thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:50,739 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:55,563 | INFO     | job.realtimelogging is not enabled
[2025-04-15 09:43:02] 2025-04-15 13:42:56,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 09:43:02] 2025-04-15 13:42:57,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622558066496)>', '<ExcThread(monitor, started 140621943641856)>']
[2025-04-15 09:43:02] 2025-04-15 13:42:57,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 09:43:02] 2025-04-15 13:42:57,657 | INFO     | [monitor] control thread has ended
[2025-04-15 09:43:02] 2025-04-15 13:43:02,026 | INFO     | all workflow threads have been joined
[2025-04-15 09:43:02] 2025-04-15 13:43:02,030 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 09:43:02] 2025-04-15 13:43:02,031 | INFO     | traces error code: 0
[2025-04-15 09:43:02] 2025-04-15 13:43:02,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 09:43:02] 2025-04-15 13:43:02,128 [wrapper] ==== pilot stdout END ====
[2025-04-15 09:43:02] 2025-04-15 13:43:02,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 09:43:02] 2025-04-15 13:43:02,136 [wrapper] pilotpid: 22222
[2025-04-15 09:43:02] 2025-04-15 13:43:02,139 [wrapper] Pilot exit status: 0
[2025-04-15 09:43:02] 2025-04-15 13:43:02,154 [wrapper] pandaids: 6603681356
[2025-04-15 09:43:02] 2025-04-15 13:43:02,191 [wrapper] cleanup supervisor_pilot 19295 22223
[2025-04-15 09:43:02] 2025-04-15 13:43:02,195 [wrapper] Test setup, not cleaning
[2025-04-15 09:43:02] 2025-04-15 13:43:02,199 [wrapper] apfmon messages muted
[2025-04-15 09:43:02] 2025-04-15 13:43:02,203 [wrapper] ==== wrapper stdout END ====
[2025-04-15 09:43:02] 2025-04-15 13:43:02,207 [wrapper] ==== wrapper stderr END ====
[2025-04-15 09:43:02]  *** Error codes and diagnostics ***
[2025-04-15 09:43:02]     "exeErrorCode": 0,
[2025-04-15 09:43:02]     "exeErrorDiag": "",
[2025-04-15 09:43:02]     "pilotErrorCode": 0,
[2025-04-15 09:43:02]     "pilotErrorDiag": "",
[2025-04-15 09:43:02]  *** Listing of results directory ***
[2025-04-15 09:43:02] total 421788
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 03:47 pilot3.tar.gz
[2025-04-15 09:43:02] -rwx------ 1 boincer umatlas     37140 Apr 15 04:02 runpilot2-wrapper.sh
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 04:02 queuedata.json
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas       100 Apr 15 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 09:43:02] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 08:17 run_atlas
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas       105 Apr 15 08:17 job.xml
[2025-04-15 09:43:02] -rw-r--r-- 2 boincer umatlas 224585266 Apr 15 08:17 EVNT.44075481._001008.pool.root.1
[2025-04-15 09:43:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 08:17 start_atlas.sh
[2025-04-15 09:43:02] drwxrwx--x 2 boincer umatlas      4096 Apr 15 08:17 shared
[2025-04-15 09:43:02] -rw-r--r-- 2 boincer umatlas    508884 Apr 15 08:17 input.tar.gz
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas         0 Apr 15 08:17 boinc_lockfile
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas      2578 Apr 15 08:17 pandaJob.out
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas       424 Apr 15 08:17 setup.sh.local
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas    984001 Apr 15 08:17 agis_schedconf.cvmfs.json
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas   1603529 Apr 15 08:17 agis_ddmendpoints.agis.ALL.json
[2025-04-15 09:43:02] drwx------ 4 boincer umatlas      4096 Apr 15 08:17 pilot3
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas      5867 Apr 15 09:37 init_data.xml
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas 201777719 Apr 15 09:42 HITS.44075483._025844.pool.root.1
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas       530 Apr 15 09:42 boinc_task_state.xml
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas      1047 Apr 15 09:42 memory_monitor_summary.json
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas    367494 Apr 15 09:42 log.44075483._025844.job.log.tgz.1
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas        95 Apr 15 09:42 pilot_heartbeat.json
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas      7748 Apr 15 09:42 heartbeat.json
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas        27 Apr 15 09:42 wrapper_checkpoint.txt
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 09:42 boinc_mmap_file
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas      4540 Apr 15 09:43 pilotlog.txt
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas    483466 Apr 15 09:43 log.44075483._025844.job.log.1
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas       357 Apr 15 09:43 output.list
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas       620 Apr 15 09:43 runtime_log
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas    870400 Apr 15 09:43 result.tar.gz
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas     11010 Apr 15 09:43 runtime_log.err
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas       657 Apr 15 09:43 kAuLDmKQqO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmtH1KDmY114Eo.diag
[2025-04-15 09:43:02] -rw-r--r-- 1 boincer umatlas     21469 Apr 15 09:43 stderr.txt
[2025-04-15 09:43:02] HITS file was successfully produced:
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas 201777719 Apr 15 09:42 shared/HITS.pool.root.1
[2025-04-15 09:43:02]  *** Contents of shared directory: ***
[2025-04-15 09:43:02] total 417752
[2025-04-15 09:43:02] -rw-r--r-- 2 boincer umatlas 224585266 Apr 15 08:17 ATLAS.root_0
[2025-04-15 09:43:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 08:17 start_atlas.sh
[2025-04-15 09:43:02] -rw-r--r-- 2 boincer umatlas    508884 Apr 15 08:17 input.tar.gz
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas 201777719 Apr 15 09:42 HITS.pool.root.1
[2025-04-15 09:43:02] -rw------- 1 boincer umatlas    870400 Apr 15 09:43 result.tar.gz
09:43:03 (18624): run_atlas exited; CPU time 47358.057556
09:43:03 (18624): called boinc_finish(0)

</stderr_txt>
]]>

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