Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 11:47:58 (52976): Detected: vboxwrapper 26206
2025-04-18 11:47:58 (52976): Detected: BOINC client v8.0.2
2025-04-18 11:47:58 (52976): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-18 11:47:58 (52976): Detected: Sandbox Configuration Enabled
2025-04-18 11:47:58 (52976): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 11:47:58 (52976): Create VM. (boinc_af3145416229ff26, slot#2)
2025-04-18 11:47:59 (52976): Setting Memory Size for VM. (4800MB)
2025-04-18 11:47:59 (52976): Setting CPU Count for VM. (8)
2025-04-18 11:47:59 (52976): Setting Chipset Options for VM.
2025-04-18 11:47:59 (52976): Setting Graphics Controller Options for VM.
2025-04-18 11:47:59 (52976): Setting Boot Options for VM.
2025-04-18 11:47:59 (52976): Setting Network Configuration for NAT.
2025-04-18 11:47:59 (52976): Enabling VM Network Access.
2025-04-18 11:47:59 (52976): Disabling USB Support for VM.
2025-04-18 11:47:59 (52976): Disabling COM Port Support for VM.
2025-04-18 11:47:59 (52976): Disabling Audio Support for VM.
2025-04-18 11:47:59 (52976): Disabling Clipboard Support for VM.
2025-04-18 11:47:59 (52976): Disabling Drag and Drop Support for VM.
2025-04-18 11:48:00 (52976): Adding storage controller(s) to VM.
2025-04-18 11:48:00 (52976): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 11:48:00 (52976): Adding VirtualBox Guest Additions to VM.
2025-04-18 11:48:00 (52976): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 11:48:00 (52976): forwarding host port 52283 to guest port 80
2025-04-18 11:48:00 (52976): Enabling remote desktop for VM.
2025-04-18 11:48:00 (52976): Required extension pack not installed, remote desktop not enabled.
2025-04-18 11:48:00 (52976): Enabling shared directory for VM.
2025-04-18 11:48:00 (52976): Starting VM using VBoxManage interface. (boinc_af3145416229ff26, slot#2)
2025-04-18 11:48:06 (52976): Successfully started VM. (PID = '53036')
2025-04-18 11:48:06 (52976): Reporting VM Process ID to BOINC.
2025-04-18 11:48:06 (52976): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-18 11:48:06 (52976): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 11:48:06 (52976): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 11:48:06 (52976): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 11:48:06 (52976): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 11:48:06 (52976): Detected: Web Application Enabled (http://localhost:52283)
2025-04-18 11:48:06 (52976): Preference change detected
2025-04-18 11:48:06 (52976): Setting CPU throttle for VM. (100%)
2025-04-18 11:48:06 (52976): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 11:48:08 (52976): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 11:48:08 (52976): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 11:48:11 (52976): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 11:48:11 (52976): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 11:48:11 (52976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 11:48:22 (52976): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 11:48:22 (52976): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 11:48:41 (52976): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.000603 main     Log opened 2025-04-18T15:48:39.490593000Z
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.001555 main     OS Product: Linux
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.001717 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.001862 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.001967 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.001970 main     Process ID: 1380
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.001971 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 11:48:41 (52976): Guest Log: 00:00:00.007179 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 11:48:41 (52976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 11:48:41 (52976): Guest Log: [INFO] Mounting shared directory
2025-04-18 11:48:41 (52976): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 11:48:48 (52976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 11:48:48 (52976): Guest Log: [INFO] Detected branch: prod
2025-04-18 11:48:49 (52976): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 11:48:49 (52976): Guest Log: Copying input files
2025-04-18 11:48:56 (52976): Guest Log: Copied input files into RunAtlas.
2025-04-18 11:48:57 (52976): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 11:48:57 (52976): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 11:48:57 (52976): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 11:48:57 (52976): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 11:49:08 (52976): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 11:49:09 (52976): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 11:49:09 (52976): Guest Log: 2.6.3.0 1660 0 30008 145007 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 11:49:11 (52976): Guest Log: copied the webapp to /var/www
2025-04-18 11:49:11 (52976): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-18 11:49:11 (52976): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-18 11:49:12 (52976): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 11:49:12 (52976): Guest Log:  *** Starting ATLAS job. (PandaID=6600601173 taskID=44075164) ***
2025-04-18 13:28:06 (52976): Status Report: Elapsed Time: '6000.000000'
2025-04-18 13:28:06 (52976): Status Report: CPU Time: '39346.800000'
2025-04-18 15:08:06 (52976): Status Report: Elapsed Time: '12000.000000'
2025-04-18 15:08:06 (52976): Status Report: CPU Time: '89294.090000'
2025-04-18 16:48:06 (52976): Status Report: Elapsed Time: '18000.000000'
2025-04-18 16:48:06 (52976): Status Report: CPU Time: '139283.650000'
2025-04-18 18:28:06 (52976): Status Report: Elapsed Time: '24000.000000'
2025-04-18 18:28:06 (52976): Status Report: CPU Time: '188977.140000'
2025-04-18 19:27:55 (52976): Guest Log:  *** Job finished ***
2025-04-18 19:27:55 (52976): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:43,713 | INFO     | [data] copytool_out thread has finished
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:44,473 | INFO     | [job] queue monitor thread has finished
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:46,944 | INFO     | [data] queue_monitor thread has finished
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:47,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520517076800)>', '<ExcThread(monitor, started 140519736841984)>']
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:48,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:48,181 | INFO     | [monitor] control thread has ended
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:52,694 | INFO     | all workflow threads have been joined
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:52,695 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:52,696 | INFO     | traces error code: 0
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:52,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,011 [wrapper] ==== pilot stdout END ====
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,041 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,082 [wrapper] pilotpid: 6038
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,118 [wrapper] Pilot exit status: 0
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,343 [wrapper] pandaids: 6600601173
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,604 [wrapper] cleanup supervisor_pilot 30597 6039
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,658 [wrapper] Test setup, not cleaning
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,705 [wrapper] apfmon messages muted
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,745 [wrapper] ==== wrapper stdout END ====
2025-04-18 19:27:55 (52976): Guest Log: 2025-04-18 23:27:53,784 [wrapper] ==== wrapper stderr END ====
2025-04-18 19:27:55 (52976): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 19:27:55 (52976): Guest Log:     "exeErrorCode": 0,
2025-04-18 19:27:55 (52976): Guest Log:     "exeErrorDiag": "",
2025-04-18 19:27:55 (52976): Guest Log:     "pilotErrorCode": 0,
2025-04-18 19:27:55 (52976): Guest Log:     "pilotErrorDiag": "",
2025-04-18 19:27:55 (52976): Guest Log:  *** Listing of results directory ***
2025-04-18 19:27:55 (52976): Guest Log: total 194764
2025-04-18 19:27:55 (52976): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 12 23:06 pilot3.tar.gz
2025-04-18 19:27:55 (52976): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 12 23:36 queuedata.json
2025-04-18 19:27:55 (52976): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 12 23:36 runpilot2-wrapper.sh
2025-04-18 19:27:55 (52976): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 18 15:48 start_atlas.sh
2025-04-18 19:27:55 (52976): Guest Log: -rw-r-----. 1 atlas atlas    508886 Apr 18 15:48 input.tar.gz
2025-04-18 19:27:55 (52976): Guest Log: -rw-r--r--. 1 atlas atlas      8527 Apr 18 15:48 init_data.xml
2025-04-18 19:27:55 (52976): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 15:48 EVNT.44075162._001963.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 19:27:55 (52976): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Apr 18 15:49 pandaJob.out
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 15:49 setup.sh.local
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas    990596 Apr 18 15:50 agis_schedconf.cvmfs.json
2025-04-18 19:27:55 (52976): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 15:51 pilot3
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas 190929741 Apr 18 23:25 HITS.44075164._050384.pool.root.1
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas      1040 Apr 18 23:26 memory_monitor_summary.json
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 23:26 agis_ddmendpoints.agis.ALL.json
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas    473194 Apr 18 23:26 log.44075164._050384.job.log.tgz.1
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 23:26 pilot_heartbeat.json
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas      7710 Apr 18 23:27 heartbeat.json
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 18 23:27 pilotlog.txt
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas   1880319 Apr 18 23:27 log.44075164._050384.job.log.1
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 23:27 output.list
2025-04-18 19:27:55 (52976): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 23:27 runtime_log
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas   2375680 Apr 18 23:27 result.tar.gz
2025-04-18 19:27:55 (52976): Guest Log: -rw-r--r--. 1 atlas atlas     10971 Apr 18 23:27 runtime_log.err
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas       674 Apr 18 23:27 JhSMDmqZzN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjZSLDmiuklin.diag
2025-04-18 19:27:55 (52976): Guest Log: Looking for outputfile HITS.44075164._050384.pool.root.1
2025-04-18 19:27:55 (52976): Guest Log: HITS file was successfully produced
2025-04-18 19:27:55 (52976): Guest Log: -rw-------. 1 atlas atlas 190929741 Apr 18 23:25 /home/atlas/RunAtlas/HITS.44075164._050384.pool.root.1
2025-04-18 19:27:56 (52976): Guest Log: Successfully finished the ATLAS job!
2025-04-18 19:27:56 (52976): Guest Log: Copying the results back to the shared directory!
2025-04-18 19:27:56 (52976): Guest Log:  *** Contents of shared directory: ***
2025-04-18 19:27:56 (52976): Guest Log: total 221160
2025-04-18 19:27:56 (52976): Guest Log: -rw-rw----. 1 root root 223546495 Apr 18 15:47 ATLAS.root_0
2025-04-18 19:27:56 (52976): Guest Log: -rw-rw-r--. 1 root root      8527 Apr 18 15:47 init_data.xml
2025-04-18 19:27:56 (52976): Guest Log: -rw-rw----. 1 root root    508886 Apr 18 15:47 input.tar.gz
2025-04-18 19:27:56 (52976): Guest Log: -rw-r--r--. 1 root root   2375680 Apr 18 23:27 result.tar.gz
2025-04-18 19:27:56 (52976): Guest Log: -rw-rw----. 1 root root     17569 Apr 18 15:47 start_atlas.sh
2025-04-18 19:27:56 (52976): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 19:27:56 (52976): VM Completion File Detected.
2025-04-18 19:27:56 (52976): Powering off VM.
2025-04-18 19:27:57 (52976): Successfully stopped VM.
2025-04-18 19:27:57 (52976): Deregistering VM. (boinc_af3145416229ff26, slot#2)
2025-04-18 19:27:57 (52976): Removing network bandwidth throttle group from VM.
2025-04-18 19:27:57 (52976): Removing VM from VirtualBox.
19:28:02 (52976): called boinc_finish(0)

</stderr_txt>
]]>

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