Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:38:02 (3963819): wrapper (7.7.26015): starting
10:38:02 (3963819): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 10:38:02] Arguments: --nthreads 12
[2025-04-15 10:38:02] Threads: 12
[2025-04-15 10:38:02] Checking for CVMFS
[2025-04-15 10:38:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 10:38:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 10:38:02] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 10:38:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 10:38:02] 2.11.5.0 2987 17316 200652 144897 3 112 35991377 45568001 10743 130560 0 161669522 99.757 146307192 30468 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-15 10:38:02] CVMFS is ok
[2025-04-15 10:38:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 10:38:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 10:38:02] Further information can be found at the LHC@home message board.
[2025-04-15 10:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 10:38:02] Checking for apptainer binary...
[2025-04-15 10:38:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 10:38:02] Running /usr/bin/apptainer --version
[2025-04-15 10:38:02] apptainer version 1.3.5-1.el9
[2025-04-15 10:38:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 10:38:02] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0090.triumf.lcg
[2025-04-15 10:38:02] apptainer works
[2025-04-15 10:38:02] Set ATHENA_PROC_NUMBER=12
[2025-04-15 10:38:02] Set ATHENA_CORE_NUMBER=12
[2025-04-15 10:38:02] Starting ATLAS job with PandaID=6603679519
[2025-04-15 10:38:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 11:59:08]  *** The last 200 lines of the pilot log: ***
[2025-04-15 11:59:08]  filesize=360607
[2025-04-15 11:59:08]  filetype=log
[2025-04-15 11:59:08]  guid=aa295f9b-c83e-4550-af74-51bed62c81c4
[2025-04-15 11:59:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-15 11:59:08]  is_altstaged=None
[2025-04-15 11:59:08]  is_tar=False
[2025-04-15 11:59:08]  lfn=log.44075483._024889.job.log.tgz.1
[2025-04-15 11:59:08]  mtime=0
[2025-04-15 11:59:08]  protocol_id=None
[2025-04-15 11:59:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-15 11:59:08]  replicas=None
[2025-04-15 11:59:08]  scope=mc23_13p6TeV
[2025-04-15 11:59:08]  status=None
[2025-04-15 11:59:08]  status_code=0
[2025-04-15 11:59:08]  storage_token=
[2025-04-15 11:59:08]  surl=/home/boinc/slots/0/PanDA_Pilot-6603679519/log.44075483._024889.job.log.tgz.1
[2025-04-15 11:59:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/e9/log.44075483._024889.job.log.tgz.1
[2025-04-15 11:59:08]  workdir=None
[2025-04-15 11:59:08] ]
[2025-04-15 11:59:08] 2025-04-15 18:58:41,897 | INFO     | transferring file log.44075483._024889.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6603679519/log.44075483._024889.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-15 11:59:08] 2025-04-15 18:58:41,897 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6603679519/log.44075483._024889.job.log.tgz.1 /home/boinc/slots/0/log.44075483._024889.job.log.t
[2025-04-15 11:59:08] 2025-04-15 18:58:41,909 | INFO     | adding to output.list: log.44075483._024889.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/e9/log.44075483._024889.job.log.tg
[2025-04-15 11:59:08] 2025-04-15 18:58:41,910 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 11:59:08] 2025-04-15 18:58:41,910 | INFO     | summary of transferred files:
[2025-04-15 11:59:08] 2025-04-15 18:58:41,910 | INFO     |  -- lfn=log.44075483._024889.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 11:59:08] 2025-04-15 18:58:41,910 | INFO     | stage-out finished correctly
[2025-04-15 11:59:08] 2025-04-15 18:58:43,745 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 11:59:08] 2025-04-15 18:58:45,343 | INFO     | job 6603679519 has state=finished
[2025-04-15 11:59:08] 2025-04-15 18:58:45,344 | INFO     | preparing for final server update for job 6603679519 in state='finished'
[2025-04-15 11:59:08] 2025-04-15 18:58:45,344 | INFO     | this job has now completed (state=finished)
[2025-04-15 11:59:08] 2025-04-15 18:58:45,344 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 11:59:08] 2025-04-15 18:58:45,344 | INFO     | log transfer has been attempted: DONE
[2025-04-15 11:59:08] 2025-04-15 18:58:45,344 | INFO     | job 6603679519 has finished - writing final server update
[2025-04-15 11:59:08] 2025-04-15 18:58:45,344 | INFO     | total number of processed events: 400 (read)
[2025-04-15 11:59:08] 2025-04-15 18:58:45,347 | INFO     | executing command: lscpu
[2025-04-15 11:59:08] 2025-04-15 18:58:45,386 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 11:59:08] 2025-04-15 18:58:46,631 | WARNING  | process 3975611 can no longer be monitored (due to stat problems) - aborting
[2025-04-15 11:59:08] 2025-04-15 18:58:46,632 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6603679519/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 11:59:08] 2025-04-15 18:58:46,780 | INFO     | number of running child processes to parent process 3975611: 1
[2025-04-15 11:59:08] 2025-04-15 18:58:46,780 | INFO     | maximum number of monitored processes: 6
[2025-04-15 11:59:08] 2025-04-15 18:58:48,231 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-15 11:59:08] 2025-04-15 18:58:48,231 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6603679519/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 11:59:08] 2025-04-15 18:58:48,232 | INFO     | extracted standard info from prmon json
[2025-04-15 11:59:08] 2025-04-15 18:58:48,232 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 11:59:08] 2025-04-15 18:58:48,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 11:59:08] 2025-04-15 18:58:48,232 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 11:59:08] 2025-04-15 18:58:48,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 11:59:08] 2025-04-15 18:58:48,233 | INFO     | fitting pss+swap vs Time
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | sum of square deviations: 115722857.94444431
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | sum of deviations: 12559606204.999987
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | mean x: 1744741183.5277777
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | mean y: 2689375.5
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | -- intersect: -189357153476.58817
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | intersect: -189357153476.58817
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | chi2: 2.033446129616909
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | -- intersect: -189357153476.58817
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | current memory leak: 108.53 B/s (using 72 data points, chi2=2.03)
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | ..............................
[2025-04-15 11:59:08] 2025-04-15 18:58:48,234 | INFO     | . Timing measurements:
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | . get job = 0 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | . initial setup = 2 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | . payload setup = 4 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | . stage-in = 0 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | . payload execution = 4807 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | . stage-out = 0 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | . log creation = 0 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,235 | INFO     | ..............................
[2025-04-15 11:59:08] 2025-04-15 18:58:48,287 | INFO     | 
[2025-04-15 11:59:08] 2025-04-15 18:58:48,287 | INFO     | job summary report
[2025-04-15 11:59:08] 2025-04-15 18:58:48,287 | INFO     | --------------------------------------------------
[2025-04-15 11:59:08] 2025-04-15 18:58:48,287 | INFO     | PanDA job id: 6603679519
[2025-04-15 11:59:08] 2025-04-15 18:58:48,287 | INFO     | task id: 44075483
[2025-04-15 11:59:08] 2025-04-15 18:58:48,287 | INFO     | errors: (none)
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | pilot state: finished 
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | transexitcode: 0
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | exeerrorcode: 0
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | exeerrordiag: 
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | exitcode: 0
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | exitmsg: OK
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | cpuconsumptiontime: 26298 s
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | nevents: 400
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | neventsw: 0
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | pid: 3975611
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | pgrp: 3975611
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | corecount: 12
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | event service: False
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | sizes: {0: 2417360, 3: 2417566, 11: 2417594, 4815: 2443730, 4816: 2443729, 4817: 2452720, 4819: 2452904, 4823: 2453074}
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | --------------------------------------------------
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | 
[2025-04-15 11:59:08] 2025-04-15 18:58:48,288 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-15 11:59:08] 2025-04-15 18:58:48,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,302 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 11:59:08] 2025-04-15 18:58:48,303 | INFO     | job 6603679519 has completed (purged errors)
[2025-04-15 11:59:08] 2025-04-15 18:58:48,303 | INFO     | overall cleanup function is called
[2025-04-15 11:59:08] 2025-04-15 18:58:49,310 | INFO     | --- collectZombieJob: --- 10, [3975611]
[2025-04-15 11:59:08] 2025-04-15 18:58:49,310 | INFO     | zombie collector waiting for pid 3975611
[2025-04-15 11:59:08] 2025-04-15 18:58:49,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 11:59:08] 2025-04-15 18:58:49,310 | INFO     | collected zombie processes
[2025-04-15 11:59:08] 2025-04-15 18:58:49,310 | INFO     | will attempt to kill all subprocesses of pid=3975611
[2025-04-15 11:59:08] 2025-04-15 18:58:49,455 | INFO     | process IDs to be killed: [3975611] (in reverse order)
[2025-04-15 11:59:08] 2025-04-15 18:58:49,514 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 11:59:08] 2025-04-15 18:58:49,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 11:59:08] 2025-04-15 18:58:49,521 | INFO     | did not find any defunct processes belonging to 3975611
[2025-04-15 11:59:08] 2025-04-15 18:58:49,527 | INFO     | did not find any defunct processes belonging to 3975611
[2025-04-15 11:59:08] 2025-04-15 18:58:49,527 | INFO     | ready for new job
[2025-04-15 11:59:08] 2025-04-15 18:58:49,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 11:59:08] 2025-04-15 18:58:49,528 | INFO     | **************************************
[2025-04-15 11:59:08] 2025-04-15 18:58:49,529 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 11:59:08] 2025-04-15 18:58:49,529 | INFO     | **************************************
[2025-04-15 11:59:08] 2025-04-15 18:58:49,529 | INFO     | 
[2025-04-15 11:59:08] 2025-04-15 18:58:49,530 | INFO     | architecture information:
[2025-04-15 11:59:08] 2025-04-15 18:58:49,531 | INFO     | executing command: cat /etc/os-release
[2025-04-15 11:59:08] 2025-04-15 18:58:49,541 | INFO     | cat /etc/os-release:
[2025-04-15 11:59:08] NAME="CentOS Linux"
[2025-04-15 11:59:08] VERSION="7 (Core)"
[2025-04-15 11:59:08] ID="centos"
[2025-04-15 11:59:08] ID_LIKE="rhel fedora"
[2025-04-15 11:59:08] VERSION_ID="7"
[2025-04-15 11:59:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 11:59:08] ANSI_COLOR="0;31"
[2025-04-15 11:59:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 11:59:08] HOME_URL="https://www.centos.org/"
[2025-04-15 11:59:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 11:59:08] 
[2025-04-15 11:59:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 11:59:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 11:59:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 11:59:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 11:59:08] 
[2025-04-15 11:59:08] 2025-04-15 18:58:49,542 | INFO     | **************************************
[2025-04-15 11:59:08] 2025-04-15 18:58:50,045 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-15 11:59:08] 2025-04-15 18:58:50,057 | INFO     | sufficient remaining disk space (1864503394304 B)
[2025-04-15 11:59:08] 2025-04-15 18:58:50,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 11:59:08] 2025-04-15 18:58:50,057 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 11:59:08] 2025-04-15 18:58:50,057 | INFO     | update_server=False
[2025-04-15 11:59:08] 2025-04-15 18:58:50,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 11:59:08] 2025-04-15 18:58:50,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 11:59:08] 2025-04-15 18:58:50,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 11:59:08] 2025-04-15 18:58:50,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 11:59:08] 2025-04-15 18:58:50,103 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 11:59:08] 2025-04-15 18:58:50,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 11:59:08] 2025-04-15 18:58:50,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 11:59:08] 2025-04-15 18:58:50,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 11:59:08] 2025-04-15 18:58:50,289 | INFO     | aborting loop
[2025-04-15 11:59:08] 2025-04-15 18:58:50,298 | INFO     | all data control threads have been joined
[2025-04-15 11:59:08] 2025-04-15 18:58:51,062 | INFO     | [job] retrieve thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:51,067 | INFO     | [job] queue monitor thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:51,097 | INFO     | all payload control threads have been joined
[2025-04-15 11:59:08] 2025-04-15 18:58:51,294 | INFO     | [job] job monitor thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:51,303 | INFO     | [data] control thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:51,306 | INFO     | all job control threads have been joined
[2025-04-15 11:59:08] 2025-04-15 18:58:51,386 | INFO     | [payload] validate_post thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:51,422 | INFO     | [job] validate thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:51,453 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:51,808 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:52,070 | INFO     | [data] copytool_out thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:52,102 | INFO     | [payload] control thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:52,311 | INFO     | [job] control thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:52,390 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:52,453 | INFO     | [data] copytool_in thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:52,623 | INFO     | [payload] failed_post thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:58:54,068 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:59:00,885 | INFO     | job.realtimelogging is not enabled
[2025-04-15 11:59:08] 2025-04-15 18:59:01,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 11:59:08] 2025-04-15 18:59:03,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648041133888)>', '<ExcThread(monitor, started 139647338395392)>']
[2025-04-15 11:59:08] 2025-04-15 18:59:04,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 11:59:08] 2025-04-15 18:59:04,173 | INFO     | [monitor] control thread has ended
[2025-04-15 11:59:08] 2025-04-15 18:59:08,702 | INFO     | all workflow threads have been joined
[2025-04-15 11:59:08] 2025-04-15 18:59:08,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 11:59:08] 2025-04-15 18:59:08,702 | INFO     | traces error code: 0
[2025-04-15 11:59:08] 2025-04-15 18:59:08,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 11:59:08] 2025-04-15 18:59:08,849 [wrapper] ==== pilot stdout END ====
[2025-04-15 11:59:08] 2025-04-15 18:59:08,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 11:59:08] 2025-04-15 18:59:08,852 [wrapper] pilotpid: 3967401
[2025-04-15 11:59:08] 2025-04-15 18:59:08,854 [wrapper] Pilot exit status: 0
[2025-04-15 11:59:08] 2025-04-15 18:59:08,861 [wrapper] pandaids: 6603679519
[2025-04-15 11:59:08] 2025-04-15 18:59:08,899 [wrapper] cleanup supervisor_pilot    8408 3967402
[2025-04-15 11:59:08] 2025-04-15 18:59:08,901 [wrapper] Test setup, not cleaning
[2025-04-15 11:59:08] 2025-04-15 18:59:08,903 [wrapper] apfmon messages muted
[2025-04-15 11:59:08] 2025-04-15 18:59:08,905 [wrapper] ==== wrapper stdout END ====
[2025-04-15 11:59:08] 2025-04-15 18:59:08,906 [wrapper] ==== wrapper stderr END ====
[2025-04-15 11:59:08]  *** Error codes and diagnostics ***
[2025-04-15 11:59:08]     "exeErrorCode": 0,
[2025-04-15 11:59:08]     "exeErrorDiag": "",
[2025-04-15 11:59:08]     "pilotErrorCode": 0,
[2025-04-15 11:59:08]     "pilotErrorDiag": "",
[2025-04-15 11:59:08]  *** Listing of results directory ***
[2025-04-15 11:59:08] total 413680
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc    495897 Apr 14 23:10 pilot3.tar.gz
[2025-04-15 11:59:08] -rwx------. 1 boinc boinc     37140 Apr 14 23:20 runpilot2-wrapper.sh
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc      5111 Apr 14 23:20 queuedata.json
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc       100 Apr 15 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 11:59:08] -rwxr-xr-x. 1 boinc boinc      7986 Apr 15 10:38 run_atlas
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc       105 Apr 15 10:38 job.xml
[2025-04-15 11:59:08] -rw-r--r--. 2 boinc boinc 221604156 Apr 15 10:38 EVNT.44075481._000970.pool.root.1
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc      6602 Apr 15 10:38 init_data.xml
[2025-04-15 11:59:08] drwxrwx--x. 2 boinc boinc      4096 Apr 15 10:38 shared
[2025-04-15 11:59:08] -rw-r--r--. 2 boinc boinc    508890 Apr 15 10:38 input.tar.gz
[2025-04-15 11:59:08] -rw-r--r--. 2 boinc boinc     17569 Apr 15 10:38 start_atlas.sh
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc         0 Apr 15 10:38 boinc_lockfile
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc      2577 Apr 15 10:38 pandaJob.out
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc       424 Apr 15 10:38 setup.sh.local
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc    984001 Apr 15 10:38 agis_schedconf.cvmfs.json
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc   1603529 Apr 15 10:38 agis_ddmendpoints.agis.ALL.json
[2025-04-15 11:59:08] drwx------. 4 boinc boinc      4096 Apr 15 10:38 pilot3
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc 196493660 Apr 15 11:58 HITS.44075483._024889.pool.root.1
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc       529 Apr 15 11:58 boinc_task_state.xml
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc        95 Apr 15 11:58 pilot_heartbeat.json
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc      1037 Apr 15 11:58 memory_monitor_summary.json
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc    360607 Apr 15 11:58 log.44075483._024889.job.log.tgz.1
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc      7723 Apr 15 11:58 heartbeat.json
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc        27 Apr 15 11:58 wrapper_checkpoint.txt
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc      8192 Apr 15 11:58 boinc_mmap_file
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc      4424 Apr 15 11:59 pilotlog.txt
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc    467361 Apr 15 11:59 log.44075483._024889.job.log.1
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc       357 Apr 15 11:59 output.list
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc       620 Apr 15 11:59 runtime_log
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc    849920 Apr 15 11:59 result.tar.gz
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc     11144 Apr 15 11:59 runtime_log.err
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc       658 Apr 15 11:59 2n3KDmupoO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDfXLDmFvspGo.diag
[2025-04-15 11:59:08] -rw-r--r--. 1 boinc boinc     21282 Apr 15 11:59 stderr.txt
[2025-04-15 11:59:08] HITS file was successfully produced:
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc 196493660 Apr 15 11:58 shared/HITS.pool.root.1
[2025-04-15 11:59:08]  *** Contents of shared directory: ***
[2025-04-15 11:59:08] total 409664
[2025-04-15 11:59:08] -rw-r--r--. 2 boinc boinc 221604156 Apr 15 10:38 ATLAS.root_0
[2025-04-15 11:59:08] -rw-r--r--. 2 boinc boinc    508890 Apr 15 10:38 input.tar.gz
[2025-04-15 11:59:08] -rw-r--r--. 2 boinc boinc     17569 Apr 15 10:38 start_atlas.sh
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc 196493660 Apr 15 11:58 HITS.pool.root.1
[2025-04-15 11:59:08] -rw-------. 1 boinc boinc    849920 Apr 15 11:59 result.tar.gz
11:59:10 (3963819): run_atlas exited; CPU time 26357.779869
11:59:10 (3963819): called boinc_finish(0)

</stderr_txt>
]]>

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