Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:00:01 (3925705): wrapper (7.7.26015): starting
05:00:01 (3925705): wrapper: running run_atlas (--nthreads 8)
[2025-04-15 05:00:01] Arguments: --nthreads 8
[2025-04-15 05:00:01] Threads: 8
[2025-04-15 05:00:01] Checking for CVMFS
[2025-04-15 05:00:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 05:00:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 05:00:01] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 05:00:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 05:00:02] 2.12.6.0 148671 69792 305744 144880 3 262 27250396 32947200 25731 130560 0 71590710 99.588 81049085 22202 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-15 05:00:02] CVMFS is ok
[2025-04-15 05:00:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 05:00:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 05:00:02] Further information can be found at the LHC@home message board.
[2025-04-15 05:00:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 05:00:02] Checking for apptainer binary...
[2025-04-15 05:00:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 05:00:02] Running /usr/bin/apptainer --version
[2025-04-15 05:00:02] apptainer version 1.4.0-1.el9
[2025-04-15 05:00:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 05:00:03] c6-6-8-1.aglt2.org
[2025-04-15 05:00:03] apptainer works
[2025-04-15 05:00:03] Set ATHENA_PROC_NUMBER=8
[2025-04-15 05:00:03] Set ATHENA_CORE_NUMBER=8
[2025-04-15 05:00:03] Starting ATLAS job with PandaID=6602375659
[2025-04-15 05:00:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 13:54:02]  *** The last 200 lines of the pilot log: ***
[2025-04-15 13:54:02] 2025-04-15 17:53:21,519 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6602375659/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 13:54:02] 2025-04-15 17:53:21,520 | INFO     | extracted standard info from prmon json
[2025-04-15 13:54:02] 2025-04-15 17:53:21,520 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 13:54:02] 2025-04-15 17:53:21,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 13:54:02] 2025-04-15 17:53:21,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 13:54:02] 2025-04-15 17:53:21,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 13:54:02] 2025-04-15 17:53:21,592 | INFO     | fitting pss+swap vs Time
[2025-04-15 13:54:02] 2025-04-15 17:53:21,611 | INFO     | sum of square deviations: 43850489836.99049
[2025-04-15 13:54:02] 2025-04-15 17:53:21,640 | INFO     | sum of deviations: 615424717027.5408
[2025-04-15 13:54:02] 2025-04-15 17:53:21,651 | INFO     | mean x: 1744723646.6180422
[2025-04-15 13:54:02] 2025-04-15 17:53:21,652 | INFO     | mean y: 2356098.9424184263
[2025-04-15 13:54:02] 2025-04-15 17:53:21,653 | INFO     | -- intersect: -24484167552.280266
[2025-04-15 13:54:02] 2025-04-15 17:53:21,653 | INFO     | intersect: -24484167552.280266
[2025-04-15 13:54:02] 2025-04-15 17:53:21,654 | INFO     | chi2: 9.542717209613974
[2025-04-15 13:54:02] 2025-04-15 17:53:21,654 | INFO     | sum of square deviations: 42600032289.78893
[2025-04-15 13:54:02] 2025-04-15 17:53:21,701 | INFO     | sum of deviations: 676804255542.3868
[2025-04-15 13:54:02] 2025-04-15 17:53:21,701 | INFO     | mean x: 1744723494.118217
[2025-04-15 13:54:02] 2025-04-15 17:53:21,702 | INFO     | mean y: 2363536.6821705424
[2025-04-15 13:54:02] 2025-04-15 17:53:21,702 | INFO     | -- intersect: -27716777085.824677
[2025-04-15 13:54:02] 2025-04-15 17:53:21,702 | INFO     | intersect: -27716777085.824677
[2025-04-15 13:54:02] 2025-04-15 17:53:21,703 | INFO     | chi2: 7.957740177706945
[2025-04-15 13:54:02] 2025-04-15 17:53:21,703 | INFO     | current chi2=7.957740177706945 (change=16.609284306467934 %)
[2025-04-15 13:54:02] 2025-04-15 17:53:21,703 | INFO     | right removable region: 515
[2025-04-15 13:54:02] 2025-04-15 17:53:21,723 | INFO     | sum of square deviations: 42599930970.062256
[2025-04-15 13:54:02] 2025-04-15 17:53:21,773 | INFO     | sum of deviations: 468486023489.36456
[2025-04-15 13:54:02] 2025-04-15 17:53:21,773 | INFO     | mean x: 1744723799.124031
[2025-04-15 13:54:02] 2025-04-15 17:53:21,773 | INFO     | mean y: 2374003.9786821706
[2025-04-15 13:54:02] 2025-04-15 17:53:21,773 | INFO     | -- intersect: -19184950860.77989
[2025-04-15 13:54:02] 2025-04-15 17:53:21,773 | INFO     | intersect: -19184950860.77989
[2025-04-15 13:54:02] 2025-04-15 17:53:21,774 | INFO     | chi2: 6.304426850714797
[2025-04-15 13:54:02] 2025-04-15 17:53:21,774 | INFO     | current chi2=6.304426850714797 (change=33.93467801431552 %)
[2025-04-15 13:54:02] 2025-04-15 17:53:21,775 | INFO     | sum of square deviations: 41373403785.35412
[2025-04-15 13:54:02] 2025-04-15 17:53:21,814 | INFO     | sum of deviations: 358093696388.3292
[2025-04-15 13:54:02] 2025-04-15 17:53:21,814 | INFO     | mean x: 1744723951.62818
[2025-04-15 13:54:02] 2025-04-15 17:53:21,815 | INFO     | mean y: 2387726.6438356163
[2025-04-15 13:54:02] 2025-04-15 17:53:21,815 | INFO     | -- intersect: -15098488484.970959
[2025-04-15 13:54:02] 2025-04-15 17:53:21,815 | INFO     | intersect: -15098488484.970959
[2025-04-15 13:54:02] 2025-04-15 17:53:21,815 | INFO     | chi2: 4.623677138468767
[2025-04-15 13:54:02] 2025-04-15 17:53:21,816 | INFO     | current chi2=4.623677138468767 (change=26.659833669978518 %)
[2025-04-15 13:54:02] 2025-04-15 17:53:21,838 | INFO     | sum of square deviations: 40170644976.128685
[2025-04-15 13:54:02] 2025-04-15 17:53:21,861 | INFO     | sum of deviations: 266147306846.3239
[2025-04-15 13:54:02] 2025-04-15 17:53:21,861 | INFO     | mean x: 1744724104.132411
[2025-04-15 13:54:02] 2025-04-15 17:53:21,862 | INFO     | mean y: 2399384.9802371543
[2025-04-15 13:54:02] 2025-04-15 17:53:21,862 | INFO     | -- intersect: -11557126775.99247
[2025-04-15 13:54:02] 2025-04-15 17:53:21,862 | INFO     | intersect: -11557126775.99247
[2025-04-15 13:54:02] 2025-04-15 17:53:21,881 | INFO     | chi2: 3.486141600006089
[2025-04-15 13:54:02] 2025-04-15 17:53:21,881 | INFO     | current chi2=3.486141600006089 (change=24.602399873434887 %)
[2025-04-15 13:54:02] 2025-04-15 17:53:21,881 | INFO     | left removable region: 30
[2025-04-15 13:54:02] 2025-04-15 17:53:21,882 | INFO     | sum of square deviations: 35373430233.002
[2025-04-15 13:54:02] 2025-04-15 17:53:21,933 | INFO     | sum of deviations: 152619960190.7774
[2025-04-15 13:54:02] 2025-04-15 17:53:21,934 | INFO     | mean x: 1744724378.6453607
[2025-04-15 13:54:02] 2025-04-15 17:53:21,934 | INFO     | mean y: 2430963.301030928
[2025-04-15 13:54:02] 2025-04-15 17:53:21,934 | INFO     | -- intersect: -7525246263.893785
[2025-04-15 13:54:02] 2025-04-15 17:53:21,934 | INFO     | intersect: -7525246263.893785
[2025-04-15 13:54:02] 2025-04-15 17:53:21,935 | INFO     | chi2: 0.31026277460270146
[2025-04-15 13:54:02] 2025-04-15 17:53:21,935 | INFO     | -- intersect: -7525246263.893785
[2025-04-15 13:54:02] 2025-04-15 17:53:21,935 | INFO     | current memory leak: 4.31 B/s (using 485 data points, chi2=0.31)
[2025-04-15 13:54:02] 2025-04-15 17:53:21,937 | INFO     | ..............................
[2025-04-15 13:54:02] 2025-04-15 17:53:21,937 | INFO     | . Timing measurements:
[2025-04-15 13:54:02] 2025-04-15 17:53:21,937 | INFO     | . get job = 0 s
[2025-04-15 13:54:02] 2025-04-15 17:53:21,957 | INFO     | . initial setup = 5 s
[2025-04-15 13:54:02] 2025-04-15 17:53:21,958 | INFO     | . payload setup = 33 s
[2025-04-15 13:54:02] 2025-04-15 17:53:21,958 | INFO     | . stage-in = 0 s
[2025-04-15 13:54:02] 2025-04-15 17:53:21,958 | INFO     | . payload execution = 31794 s
[2025-04-15 13:54:02] 2025-04-15 17:53:21,958 | INFO     | . stage-out = 10 s
[2025-04-15 13:54:02] 2025-04-15 17:53:21,958 | INFO     | . log creation = 1 s
[2025-04-15 13:54:02] 2025-04-15 17:53:21,958 | INFO     | ..............................
[2025-04-15 13:54:02] 2025-04-15 17:53:22,430 | INFO     | 
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | job summary report
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | --------------------------------------------------
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | PanDA job id: 6602375659
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | task id: 44075483
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | errors: (none)
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | pilot state: finished 
[2025-04-15 13:54:02] 2025-04-15 17:53:22,431 | INFO     | transexitcode: 0
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | exeerrorcode: 0
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | exeerrordiag: 
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | exitcode: 0
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | exitmsg: OK
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | cpuconsumptiontime: 52230 s
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | nevents: 400
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | neventsw: 0
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | pid: 3941846
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | pgrp: 3941846
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | corecount: 8
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | event service: False
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | sizes: {0: 2417080, 1: 2417164, 2: 2417335, 3: 2417363, 14: 2417391, 24: 2417419, 32: 2417781, 35: 2417809, 31833: 2455995, 31834: 2455994, 31845: 2464991, 31846: 
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | --------------------------------------------------
[2025-04-15 13:54:02] 2025-04-15 17:53:22,432 | INFO     | 
[2025-04-15 13:54:02] 2025-04-15 17:53:22,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-15 13:54:02] 2025-04-15 17:53:22,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,555 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,555 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 13:54:02] 2025-04-15 17:53:22,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 13:54:02] 2025-04-15 17:53:22,557 | INFO     | job 6602375659 has completed (purged errors)
[2025-04-15 13:54:02] 2025-04-15 17:53:22,557 | INFO     | overall cleanup function is called
[2025-04-15 13:54:02] 2025-04-15 17:53:23,627 | INFO     | --- collectZombieJob: --- 10, [3941846]
[2025-04-15 13:54:02] 2025-04-15 17:53:23,628 | INFO     | zombie collector waiting for pid 3941846
[2025-04-15 13:54:02] 2025-04-15 17:53:23,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 13:54:02] 2025-04-15 17:53:23,628 | INFO     | collected zombie processes
[2025-04-15 13:54:02] 2025-04-15 17:53:23,628 | INFO     | will attempt to kill all subprocesses of pid=3941846
[2025-04-15 13:54:02] 2025-04-15 17:53:25,314 | INFO     | process IDs to be killed: [3941846] (in reverse order)
[2025-04-15 13:54:02] 2025-04-15 17:53:25,691 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 13:54:02] 2025-04-15 17:53:25,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 13:54:02] 2025-04-15 17:53:25,709 | INFO     | did not find any defunct processes belonging to 3941846
[2025-04-15 13:54:02] 2025-04-15 17:53:25,727 | INFO     | did not find any defunct processes belonging to 3941846
[2025-04-15 13:54:02] 2025-04-15 17:53:25,728 | INFO     | ready for new job
[2025-04-15 13:54:02] 2025-04-15 17:53:25,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 13:54:02] 2025-04-15 17:53:25,737 | INFO     | **************************************
[2025-04-15 13:54:02] 2025-04-15 17:53:25,737 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 13:54:02] 2025-04-15 17:53:25,737 | INFO     | **************************************
[2025-04-15 13:54:02] 2025-04-15 17:53:25,737 | INFO     | 
[2025-04-15 13:54:02] 2025-04-15 17:53:25,776 | INFO     | architecture information:
[2025-04-15 13:54:02] 2025-04-15 17:53:25,789 | INFO     | executing command: cat /etc/os-release
[2025-04-15 13:54:02] 2025-04-15 17:53:25,847 | INFO     | cat /etc/os-release:
[2025-04-15 13:54:02] NAME="CentOS Linux"
[2025-04-15 13:54:02] VERSION="7 (Core)"
[2025-04-15 13:54:02] ID="centos"
[2025-04-15 13:54:02] ID_LIKE="rhel fedora"
[2025-04-15 13:54:02] VERSION_ID="7"
[2025-04-15 13:54:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 13:54:02] ANSI_COLOR="0;31"
[2025-04-15 13:54:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 13:54:02] HOME_URL="https://www.centos.org/"
[2025-04-15 13:54:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 13:54:02] 
[2025-04-15 13:54:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 13:54:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 13:54:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 13:54:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 13:54:02] 
[2025-04-15 13:54:02] 2025-04-15 17:53:25,847 | INFO     | **************************************
[2025-04-15 13:54:02] 2025-04-15 17:53:26,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-15 13:54:02] 2025-04-15 17:53:26,409 | INFO     | sufficient remaining disk space (73706504192 B)
[2025-04-15 13:54:02] 2025-04-15 17:53:26,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 13:54:02] 2025-04-15 17:53:26,409 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 13:54:02] 2025-04-15 17:53:26,409 | INFO     | update_server=False
[2025-04-15 13:54:02] 2025-04-15 17:53:26,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 13:54:02] 2025-04-15 17:53:26,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 13:54:02] 2025-04-15 17:53:26,410 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 13:54:02] 2025-04-15 17:53:26,410 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 13:54:02] 2025-04-15 17:53:26,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 13:54:02] 2025-04-15 17:53:26,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 13:54:02] 2025-04-15 17:53:26,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 13:54:02] 2025-04-15 17:53:26,428 | INFO     | aborting loop
[2025-04-15 13:54:02] 2025-04-15 17:53:27,415 | INFO     | [job] retrieve thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:27,434 | INFO     | [job] job monitor thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:27,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 13:54:02] 2025-04-15 17:53:27,484 | INFO     | all data control threads have been joined
[2025-04-15 13:54:02] 2025-04-15 17:53:27,608 | INFO     | [payload] validate_post thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:27,842 | INFO     | all job control threads have been joined
[2025-04-15 13:54:02] 2025-04-15 17:53:27,957 | INFO     | all payload control threads have been joined
[2025-04-15 13:54:02] 2025-04-15 17:53:28,016 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,050 | INFO     | [job] validate thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,149 | INFO     | [payload] failed_post thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,203 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,370 | INFO     | [data] copytool_in thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,371 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,415 | INFO     | [data] copytool_out thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,441 | INFO     | [job] queue monitor thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,490 | INFO     | [data] control thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,848 | INFO     | [job] control thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:28,974 | INFO     | [payload] control thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:29,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 13:54:02] 2025-04-15 17:53:33,160 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 13:54:02] 2025-04-15 17:53:34,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418098755392)>', '<ExcThread(monitor, started 140417303570176)>']
[2025-04-15 13:54:02] 2025-04-15 17:53:34,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 13:54:02] 2025-04-15 17:53:34,489 | INFO     | [monitor] control thread has ended
[2025-04-15 13:54:02] 2025-04-15 17:53:39,420 | INFO     | all workflow threads have been joined
[2025-04-15 13:54:02] 2025-04-15 17:53:39,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 13:54:02] 2025-04-15 17:53:39,421 | INFO     | traces error code: 0
[2025-04-15 13:54:02] 2025-04-15 17:53:39,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 13:54:02] 2025-04-15 17:53:39,864 [wrapper] ==== pilot stdout END ====
[2025-04-15 13:54:02] 2025-04-15 17:53:39,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 13:54:02] 2025-04-15 17:53:39,922 [wrapper] pilotpid: 3930902
[2025-04-15 13:54:02] 2025-04-15 17:53:39,961 [wrapper] Pilot exit status: 0
[2025-04-15 13:54:02] 2025-04-15 17:53:40,120 [wrapper] pandaids: 6602375659
[2025-04-15 13:54:02] 2025-04-15 17:53:40,907 [wrapper] cleanup supervisor_pilot 2181502 3930903
[2025-04-15 13:54:02] 2025-04-15 17:53:40,921 [wrapper] Test setup, not cleaning
[2025-04-15 13:54:02] 2025-04-15 17:53:40,941 [wrapper] apfmon messages muted
[2025-04-15 13:54:02] 2025-04-15 17:53:40,960 [wrapper] ==== wrapper stdout END ====
[2025-04-15 13:54:02] 2025-04-15 17:53:40,981 [wrapper] ==== wrapper stderr END ====
[2025-04-15 13:54:02]  *** Error codes and diagnostics ***
[2025-04-15 13:54:02]     "exeErrorCode": 0,
[2025-04-15 13:54:02]     "exeErrorDiag": "",
[2025-04-15 13:54:02]     "pilotErrorCode": 0,
[2025-04-15 13:54:02]     "pilotErrorDiag": "",
[2025-04-15 13:54:02]  *** Listing of results directory ***
[2025-04-15 13:54:02] total 418696
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas    503527 Apr  3 03:42 pilot3.tar.gz
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 16:39 queuedata.json
[2025-04-15 13:54:02] -rwx------ 1 boincer umatlas     37140 Apr 14 16:39 runpilot2-wrapper.sh
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas       100 Apr 15 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 13:54:02] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 05:00 run_atlas
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas       105 Apr 15 05:00 job.xml
[2025-04-15 13:54:02] -rw-r--r-- 2 boincer umatlas 222334695 Apr 15 05:00 EVNT.44075481._000808.pool.root.1
[2025-04-15 13:54:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 05:00 start_atlas.sh
[2025-04-15 13:54:02] drwxrwx--x 2 boincer umatlas      4096 Apr 15 05:00 shared
[2025-04-15 13:54:02] -rw-r--r-- 2 boincer umatlas    517105 Apr 15 05:00 input.tar.gz
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas         0 Apr 15 05:00 boinc_lockfile
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas      2574 Apr 15 05:00 pandaJob.out
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas       467 Apr 15 05:00 setup.sh.local
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas    983969 Apr 15 05:00 agis_schedconf.cvmfs.json
[2025-04-15 13:54:02] drwx------ 4 boincer umatlas      4096 Apr 15 05:01 pilot3
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas      6856 Apr 15 13:46 init_data.xml
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas 196054666 Apr 15 13:50 HITS.44075483._020388.pool.root.1
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas       531 Apr 15 13:50 boinc_task_state.xml
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas      1058 Apr 15 13:52 memory_monitor_summary.json
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas   1603529 Apr 15 13:52 agis_ddmendpoints.agis.ALL.json
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas    546157 Apr 15 13:52 log.44075483._020388.job.log.tgz.1
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas        95 Apr 15 13:53 pilot_heartbeat.json
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas      7748 Apr 15 13:53 heartbeat.json
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas      4476 Apr 15 13:53 pilotlog.txt
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas   2704366 Apr 15 13:53 log.44075483._020388.job.log.1
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas       357 Apr 15 13:53 output.list
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas       620 Apr 15 13:53 runtime_log
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas   3266560 Apr 15 13:53 result.tar.gz
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas     11419 Apr 15 13:53 runtime_log.err
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas       662 Apr 15 13:53 dYtKDm6lfO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmbg0KDmlJOS8n.diag
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas        28 Apr 15 13:54 wrapper_checkpoint.txt
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 13:54 boinc_mmap_file
[2025-04-15 13:54:02] -rw-r--r-- 1 boincer umatlas     20986 Apr 15 13:54 stderr.txt
[2025-04-15 13:54:02] HITS file was successfully produced:
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas 196054666 Apr 15 13:50 shared/HITS.pool.root.1
[2025-04-15 13:54:02]  *** Contents of shared directory: ***
[2025-04-15 13:54:02] total 412312
[2025-04-15 13:54:02] -rw-r--r-- 2 boincer umatlas 222334695 Apr 15 05:00 ATLAS.root_0
[2025-04-15 13:54:02] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 05:00 start_atlas.sh
[2025-04-15 13:54:02] -rw-r--r-- 2 boincer umatlas    517105 Apr 15 05:00 input.tar.gz
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas 196054666 Apr 15 13:50 HITS.pool.root.1
[2025-04-15 13:54:02] -rw------- 1 boincer umatlas   3266560 Apr 15 13:53 result.tar.gz
13:54:04 (3925705): run_atlas exited; CPU time 53505.808044
13:54:04 (3925705): called boinc_finish(0)

</stderr_txt>
]]>

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