Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:25:14 (10184): wrapper (7.7.26015): starting
03:25:14 (10184): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 03:25:14] Arguments: --nthreads 12
[2025-04-15 03:25:14] Threads: 12
[2025-04-15 03:25:14] Checking for CVMFS
[2025-04-15 03:25:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 03:25:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 03:25:15] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 03:25:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 03:25:15] 2.11.2.0 11312 211092 117808 144879 3 134 17944635 18432000 3363 130560 0 20597591 99.301 41699914 29325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 03:25:15] CVMFS is ok
[2025-04-15 03:25:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 03:25:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 03:25:15] Further information can be found at the LHC@home message board.
[2025-04-15 03:25:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 03:25:15] Checking for apptainer binary...
[2025-04-15 03:25:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 03:25:15] Running /usr/bin/apptainer --version
[2025-04-15 03:25:16] apptainer version 1.3.2-1.el7
[2025-04-15 03:25:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 03:25:17] c-206-14.aglt2.org
[2025-04-15 03:25:17] apptainer works
[2025-04-15 03:25:17] Set ATHENA_PROC_NUMBER=12
[2025-04-15 03:25:17] Set ATHENA_CORE_NUMBER=12
[2025-04-15 03:25:17] Starting ATLAS job with PandaID=6600443017
[2025-04-15 03:25:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:11:47 (15661): wrapper (7.7.26015): starting
04:11:47 (15661): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 04:11:47] Arguments: --nthreads 12
[2025-04-15 04:11:47] Threads: 12
[2025-04-15 04:11:47] This job has been restarted, cleaning up previous attempt
[2025-04-15 04:11:47] Checking for CVMFS
[2025-04-15 04:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 04:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 04:11:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 04:11:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 04:11:55] 2.11.2.0 11312 211139 137308 144879 1 476 18312995 18432000 4171 130560 0 20687422 99.302 41813704 29317 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 04:11:55] CVMFS is ok
[2025-04-15 04:11:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 04:11:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 04:11:55] Further information can be found at the LHC@home message board.
[2025-04-15 04:11:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 04:11:55] Checking for apptainer binary...
[2025-04-15 04:11:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 04:11:55] Running /usr/bin/apptainer --version
[2025-04-15 04:11:57] apptainer version 1.3.2-1.el7
[2025-04-15 04:11:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 04:12:29] c-206-14.aglt2.org
[2025-04-15 04:12:29] apptainer works
[2025-04-15 04:12:29] Set ATHENA_PROC_NUMBER=12
[2025-04-15 04:12:29] Set ATHENA_CORE_NUMBER=12
[2025-04-15 04:12:29] Starting ATLAS job with PandaID=6600443017
[2025-04-15 04:12:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 13:35:08]  *** The last 200 lines of the pilot log: ***
[2025-04-15 13:35:08] 2025-04-15 17:34:47,574 | INFO     | sum of deviations: 701046806137.9495
[2025-04-15 13:35:08] 2025-04-15 17:34:47,574 | INFO     | mean x: 1744721989.3351853
[2025-04-15 13:35:08] 2025-04-15 17:34:47,574 | INFO     | mean y: 2567631.05
[2025-04-15 13:35:08] 2025-04-15 17:34:47,574 | INFO     | -- intersect: -25047018701.11068
[2025-04-15 13:35:08] 2025-04-15 17:34:47,575 | INFO     | intersect: -25047018701.11068
[2025-04-15 13:35:08] 2025-04-15 17:34:47,576 | INFO     | chi2: 10.380762785972461
[2025-04-15 13:35:08] 2025-04-15 17:34:47,576 | INFO     | current chi2=10.380762785972461 (change=31.934669171245538 %)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,577 | INFO     | sum of square deviations: 47484600284.85199
[2025-04-15 13:35:08] 2025-04-15 17:34:47,587 | INFO     | sum of deviations: 536502015500.7836
[2025-04-15 13:35:08] 2025-04-15 17:34:47,587 | INFO     | mean x: 1744722141.8373833
[2025-04-15 13:35:08] 2025-04-15 17:34:47,588 | INFO     | mean y: 2586300.3308411213
[2025-04-15 13:35:08] 2025-04-15 17:34:47,588 | INFO     | -- intersect: -19710056113.618416
[2025-04-15 13:35:08] 2025-04-15 17:34:47,588 | INFO     | intersect: -19710056113.618416
[2025-04-15 13:35:08] 2025-04-15 17:34:47,589 | INFO     | chi2: 7.236393255753829
[2025-04-15 13:35:08] 2025-04-15 17:34:47,589 | INFO     | current chi2=7.236393255753829 (change=30.29035144187692 %)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,590 | INFO     | sum of square deviations: 46165596885.5019
[2025-04-15 13:35:08] 2025-04-15 17:34:47,601 | INFO     | sum of deviations: 404608836436.2229
[2025-04-15 13:35:08] 2025-04-15 17:34:47,601 | INFO     | mean x: 1744722294.3433962
[2025-04-15 13:35:08] 2025-04-15 17:34:47,601 | INFO     | mean y: 2601547.520754717
[2025-04-15 13:35:08] 2025-04-15 17:34:47,601 | INFO     | -- intersect: -15288656554.685501
[2025-04-15 13:35:08] 2025-04-15 17:34:47,602 | INFO     | intersect: -15288656554.685501
[2025-04-15 13:35:08] 2025-04-15 17:34:47,603 | INFO     | chi2: 5.304025677327732
[2025-04-15 13:35:08] 2025-04-15 17:34:47,603 | INFO     | current chi2=5.304025677327732 (change=26.70346276288434 %)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,604 | INFO     | sum of square deviations: 44871438845.238075
[2025-04-15 13:35:08] 2025-04-15 17:34:47,614 | INFO     | sum of deviations: 289854146296.7523
[2025-04-15 13:35:08] 2025-04-15 17:34:47,614 | INFO     | mean x: 1744722446.8380952
[2025-04-15 13:35:08] 2025-04-15 17:34:47,614 | INFO     | mean y: 2615066.0323809525
[2025-04-15 13:35:08] 2025-04-15 17:34:47,614 | INFO     | -- intersect: -11267695143.926605
[2025-04-15 13:35:08] 2025-04-15 17:34:47,614 | INFO     | intersect: -11267695143.926605
[2025-04-15 13:35:08] 2025-04-15 17:34:47,615 | INFO     | chi2: 3.863098627003491
[2025-04-15 13:35:08] 2025-04-15 17:34:47,616 | INFO     | current chi2=3.863098627003491 (change=27.166668074092115 %)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,617 | INFO     | sum of square deviations: 43601540111.06933
[2025-04-15 13:35:08] 2025-04-15 17:34:47,626 | INFO     | sum of deviations: 182378226428.96155
[2025-04-15 13:35:08] 2025-04-15 17:34:47,627 | INFO     | mean x: 1744722599.3423078
[2025-04-15 13:35:08] 2025-04-15 17:34:47,627 | INFO     | mean y: 2627972.8653846155
[2025-04-15 13:35:08] 2025-04-15 17:34:47,627 | INFO     | -- intersect: -7295265919.598175
[2025-04-15 13:35:08] 2025-04-15 17:34:47,627 | INFO     | intersect: -7295265919.598175
[2025-04-15 13:35:08] 2025-04-15 17:34:47,628 | INFO     | chi2: 2.603525425247361
[2025-04-15 13:35:08] 2025-04-15 17:34:47,629 | INFO     | current chi2=2.603525425247361 (change=32.605256126560484 %)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,630 | INFO     | sum of square deviations: 42355954511.62323
[2025-04-15 13:35:08] 2025-04-15 17:34:47,640 | INFO     | sum of deviations: 116389344847.73978
[2025-04-15 13:35:08] 2025-04-15 17:34:47,640 | INFO     | mean x: 1744722751.838835
[2025-04-15 13:35:08] 2025-04-15 17:34:47,640 | INFO     | mean y: 2636041.033009709
[2025-04-15 13:35:08] 2025-04-15 17:34:47,640 | INFO     | -- intersect: -4791663612.200928
[2025-04-15 13:35:08] 2025-04-15 17:34:47,640 | INFO     | intersect: -4791663612.200928
[2025-04-15 13:35:08] 2025-04-15 17:34:47,641 | INFO     | chi2: 2.1079605949336626
[2025-04-15 13:35:08] 2025-04-15 17:34:47,642 | INFO     | current chi2=2.1079605949336626 (change=19.03437644618412 %)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,642 | INFO     | left removable region: 60
[2025-04-15 13:35:08] 2025-04-15 17:34:47,643 | INFO     | sum of square deviations: 34080943567.703373
[2025-04-15 13:35:08] 2025-04-15 17:34:47,651 | INFO     | sum of deviations: 62487571655.7954
[2025-04-15 13:35:08] 2025-04-15 17:34:47,651 | INFO     | mean x: 1744723483.789144
[2025-04-15 13:35:08] 2025-04-15 17:34:47,651 | INFO     | mean y: 2660937.037578288
[2025-04-15 13:35:08] 2025-04-15 17:34:47,652 | INFO     | -- intersect: -3196297844.612432
[2025-04-15 13:35:08] 2025-04-15 17:34:47,652 | INFO     | intersect: -3196297844.612432
[2025-04-15 13:35:08] 2025-04-15 17:34:47,653 | INFO     | chi2: 0.013838042447681243
[2025-04-15 13:35:08] 2025-04-15 17:34:47,653 | INFO     | -- intersect: -3196297844.612432
[2025-04-15 13:35:08] 2025-04-15 17:34:47,653 | INFO     | current memory leak: 1.83 B/s (using 479 data points, chi2=0.01)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,654 | INFO     | ..............................
[2025-04-15 13:35:08] 2025-04-15 17:34:47,655 | INFO     | . Timing measurements:
[2025-04-15 13:35:08] 2025-04-15 17:34:47,655 | INFO     | . get job = 2 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,655 | INFO     | . initial setup = 18 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,655 | INFO     | . payload setup = 66 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,655 | INFO     | . stage-in = 0 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,656 | INFO     | . payload execution = 33364 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,656 | INFO     | . stage-out = 4 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,656 | INFO     | . log creation = 1 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,656 | INFO     | ..............................
[2025-04-15 13:35:08] 2025-04-15 17:34:47,815 | INFO     | 
[2025-04-15 13:35:08] 2025-04-15 17:34:47,834 | INFO     | job summary report
[2025-04-15 13:35:08] 2025-04-15 17:34:47,834 | INFO     | --------------------------------------------------
[2025-04-15 13:35:08] 2025-04-15 17:34:47,835 | INFO     | PanDA job id: 6600443017
[2025-04-15 13:35:08] 2025-04-15 17:34:47,835 | INFO     | task id: 44075164
[2025-04-15 13:35:08] 2025-04-15 17:34:47,835 | INFO     | errors: (none)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,835 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 13:35:08] 2025-04-15 17:34:47,835 | INFO     | pilot state: finished 
[2025-04-15 13:35:08] 2025-04-15 17:34:47,835 | INFO     | transexitcode: 0
[2025-04-15 13:35:08] 2025-04-15 17:34:47,836 | INFO     | exeerrorcode: 0
[2025-04-15 13:35:08] 2025-04-15 17:34:47,836 | INFO     | exeerrordiag: 
[2025-04-15 13:35:08] 2025-04-15 17:34:47,836 | INFO     | exitcode: 0
[2025-04-15 13:35:08] 2025-04-15 17:34:47,836 | INFO     | exitmsg: OK
[2025-04-15 13:35:08] 2025-04-15 17:34:47,836 | INFO     | cpuconsumptiontime: 99843 s
[2025-04-15 13:35:08] 2025-04-15 17:34:47,836 | INFO     | nevents: 400
[2025-04-15 13:35:08] 2025-04-15 17:34:47,837 | INFO     | neventsw: 0
[2025-04-15 13:35:08] 2025-04-15 17:34:47,837 | INFO     | pid: 1170
[2025-04-15 13:35:08] 2025-04-15 17:34:47,837 | INFO     | pgrp: 1170
[2025-04-15 13:35:08] 2025-04-15 17:34:47,837 | INFO     | corecount: 12
[2025-04-15 13:35:08] 2025-04-15 17:34:47,837 | INFO     | event service: False
[2025-04-15 13:35:08] 2025-04-15 17:34:47,838 | INFO     | sizes: {0: 2416499, 1: 2417100, 3: 2417184, 7: 2417212, 8: 2417411, 9: 2417439, 10: 2417595, 24: 2417623, 34: 2417651, 46: 2417679, 57: 2417707, 70: 2418015, 81: 2
[2025-04-15 13:35:08] 2025-04-15 17:34:47,838 | INFO     | --------------------------------------------------
[2025-04-15 13:35:08] 2025-04-15 17:34:47,838 | INFO     | 
[2025-04-15 13:35:08] 2025-04-15 17:34:47,838 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 13:35:08] 2025-04-15 17:34:47,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 13:35:08] 2025-04-15 17:34:47,892 | INFO     | job 6600443017 has completed (purged errors)
[2025-04-15 13:35:08] 2025-04-15 17:34:47,893 | INFO     | overall cleanup function is called
[2025-04-15 13:35:08] 2025-04-15 17:34:48,897 | INFO     | --- collectZombieJob: --- 10, [1170]
[2025-04-15 13:35:08] 2025-04-15 17:34:48,897 | INFO     | zombie collector waiting for pid 1170
[2025-04-15 13:35:08] 2025-04-15 17:34:48,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 13:35:08] 2025-04-15 17:34:48,898 | INFO     | collected zombie processes
[2025-04-15 13:35:08] 2025-04-15 17:34:48,898 | INFO     | will attempt to kill all subprocesses of pid=1170
[2025-04-15 13:35:08] 2025-04-15 17:34:49,289 | INFO     | process IDs to be killed: [1170] (in reverse order)
[2025-04-15 13:35:08] 2025-04-15 17:34:49,344 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 13:35:08] 2025-04-15 17:34:49,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 13:35:08] 2025-04-15 17:34:49,349 | INFO     | did not find any defunct processes belonging to 1170
[2025-04-15 13:35:08] 2025-04-15 17:34:49,353 | INFO     | did not find any defunct processes belonging to 1170
[2025-04-15 13:35:08] 2025-04-15 17:34:49,354 | INFO     | ready for new job
[2025-04-15 13:35:08] 2025-04-15 17:34:49,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 13:35:08] 2025-04-15 17:34:49,356 | INFO     | **************************************
[2025-04-15 13:35:08] 2025-04-15 17:34:49,356 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 13:35:08] 2025-04-15 17:34:49,356 | INFO     | **************************************
[2025-04-15 13:35:08] 2025-04-15 17:34:49,356 | INFO     | 
[2025-04-15 13:35:08] 2025-04-15 17:34:49,357 | INFO     | architecture information:
[2025-04-15 13:35:08] 2025-04-15 17:34:49,358 | INFO     | executing command: cat /etc/os-release
[2025-04-15 13:35:08] 2025-04-15 17:34:49,374 | INFO     | cat /etc/os-release:
[2025-04-15 13:35:08] NAME="CentOS Linux"
[2025-04-15 13:35:08] VERSION="7 (Core)"
[2025-04-15 13:35:08] ID="centos"
[2025-04-15 13:35:08] ID_LIKE="rhel fedora"
[2025-04-15 13:35:08] VERSION_ID="7"
[2025-04-15 13:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 13:35:08] ANSI_COLOR="0;31"
[2025-04-15 13:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 13:35:08] HOME_URL="https://www.centos.org/"
[2025-04-15 13:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 13:35:08] 
[2025-04-15 13:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 13:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 13:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 13:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 13:35:08] 
[2025-04-15 13:35:08] 2025-04-15 17:34:49,374 | INFO     | **************************************
[2025-04-15 13:35:08] 2025-04-15 17:34:49,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 13:35:08] 2025-04-15 17:34:50,022 | INFO     | sufficient remaining disk space (29287776256 B)
[2025-04-15 13:35:08] 2025-04-15 17:34:50,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 13:35:08] 2025-04-15 17:34:50,023 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 13:35:08] 2025-04-15 17:34:50,023 | INFO     | update_server=False
[2025-04-15 13:35:08] 2025-04-15 17:34:50,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 13:35:08] 2025-04-15 17:34:50,024 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 13:35:08] 2025-04-15 17:34:50,024 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 13:35:08] 2025-04-15 17:34:50,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 13:35:08] 2025-04-15 17:34:50,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 13:35:08] 2025-04-15 17:34:50,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 13:35:08] 2025-04-15 17:34:50,261 | INFO     | all payload control threads have been joined
[2025-04-15 13:35:08] 2025-04-15 17:34:50,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 13:35:08] 2025-04-15 17:34:50,748 | INFO     | aborting loop
[2025-04-15 13:35:08] 2025-04-15 17:34:50,832 | INFO     | all job control threads have been joined
[2025-04-15 13:35:08] 2025-04-15 17:34:51,031 | INFO     | [job] retrieve thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:51,062 | INFO     | all data control threads have been joined
[2025-04-15 13:35:08] 2025-04-15 17:34:51,267 | INFO     | [payload] control thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:51,303 | INFO     | [payload] failed_post thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:51,753 | INFO     | [job] job monitor thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:51,826 | INFO     | [payload] validate_post thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:51,839 | INFO     | [job] control thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:51,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 13:35:08] 2025-04-15 17:34:51,907 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,033 | INFO     | [data] copytool_out thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,068 | INFO     | [data] control thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,179 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,198 | INFO     | [job] validate thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,189 | INFO     | [data] copytool_in thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,233 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:52,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 13:35:08] 2025-04-15 17:34:53,832 | INFO     | [job] queue monitor thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:55,846 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 13:35:08] 2025-04-15 17:34:57,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761777395520)>', '<ExcThread(monitor, started 139761482180352)>']
[2025-04-15 13:35:08] 2025-04-15 17:34:58,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 13:35:08] 2025-04-15 17:34:58,063 | INFO     | [monitor] control thread has ended
[2025-04-15 13:35:08] 2025-04-15 17:35:02,829 | INFO     | all workflow threads have been joined
[2025-04-15 13:35:08] 2025-04-15 17:35:02,830 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 13:35:08] 2025-04-15 17:35:02,866 | INFO     | traces error code: 0
[2025-04-15 13:35:08] 2025-04-15 17:35:02,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 13:35:08] 2025-04-15 17:35:04,600 [wrapper] ==== pilot stdout END ====
[2025-04-15 13:35:08] 2025-04-15 17:35:04,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 13:35:08] 2025-04-15 17:35:04,607 [wrapper] pilotpid: 22028
[2025-04-15 13:35:08] 2025-04-15 17:35:04,610 [wrapper] Pilot exit status: 0
[2025-04-15 13:35:08] 2025-04-15 17:35:04,679 [wrapper] pandaids: 6600443017 6600443017
[2025-04-15 13:35:08] 2025-04-15 17:35:04,814 [wrapper] cleanup supervisor_pilot  9245 22029
[2025-04-15 13:35:08] 2025-04-15 17:35:04,818 [wrapper] Test setup, not cleaning
[2025-04-15 13:35:08] 2025-04-15 17:35:04,833 [wrapper] apfmon messages muted
[2025-04-15 13:35:08] 2025-04-15 17:35:04,837 [wrapper] ==== wrapper stdout END ====
[2025-04-15 13:35:08] 2025-04-15 17:35:04,841 [wrapper] ==== wrapper stderr END ====
[2025-04-15 13:35:08]  *** Error codes and diagnostics ***
[2025-04-15 13:35:08]     "exeErrorCode": 0,
[2025-04-15 13:35:08]     "exeErrorDiag": "",
[2025-04-15 13:35:08]     "pilotErrorCode": 0,
[2025-04-15 13:35:08]     "pilotErrorDiag": "",
[2025-04-15 13:35:08]  *** Listing of results directory ***
[2025-04-15 13:35:08] total 635232
[2025-04-15 13:35:08] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas    495897 Apr 12 09:48 pilot3.tar.gz
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas      5111 Apr 12 10:11 queuedata.json
[2025-04-15 13:35:08] -rwx------ 1 boincer umatlas     37140 Apr 12 10:12 runpilot2-wrapper.sh
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas       100 Apr 15 03:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 13:35:08] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 03:25 run_atlas
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas       105 Apr 15 03:25 job.xml
[2025-04-15 13:35:08] -rw-r--r-- 3 boincer umatlas 218524947 Apr 15 03:25 EVNT.44075162._001762.pool.root.1
[2025-04-15 13:35:08] -rw-r--r-- 3 boincer umatlas 218524947 Apr 15 03:25 ATLAS.root_0
[2025-04-15 13:35:08] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 03:25 start_atlas.sh
[2025-04-15 13:35:08] drwxrwx--x 2 boincer umatlas      4096 Apr 15 03:25 shared
[2025-04-15 13:35:08] -rw-r--r-- 2 boincer umatlas    508888 Apr 15 03:25 input.tar.gz
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas         0 Apr 15 03:25 boinc_lockfile
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas      2550 Apr 15 04:12 pandaJob.out
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas       424 Apr 15 04:12 setup.sh.local
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas    983969 Apr 15 04:15 agis_schedconf.cvmfs.json
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas      5868 Apr 15 13:27 init_data.xml
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas 203003788 Apr 15 13:29 HITS.44075164._045341.pool.root.1
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas       532 Apr 15 13:32 boinc_task_state.xml
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas      1066 Apr 15 13:34 memory_monitor_summary.json
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas        96 Apr 15 13:34 pilot_heartbeat.json
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas   1603529 Apr 15 13:34 agis_ddmendpoints.agis.ALL.json
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas    631271 Apr 15 13:34 log.44075164._045341.job.log.tgz.1
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas      7788 Apr 15 13:34 heartbeat.json
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas      4476 Apr 15 13:35 pilotlog.txt
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas        29 Apr 15 13:35 wrapper_checkpoint.txt
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 13:35 boinc_mmap_file
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas   2658444 Apr 15 13:35 log.44075164._045341.job.log.1
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas       357 Apr 15 13:35 output.list
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas       620 Apr 15 13:35 runtime_log
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas   3307520 Apr 15 13:35 result.tar.gz
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas     11101 Apr 15 13:35 runtime_log.err
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas       790 Apr 15 13:35 cXBMDm1lqN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm7dRLDmzNek6m.diag
[2025-04-15 13:35:08] -rw-r--r-- 1 boincer umatlas     23049 Apr 15 13:35 stderr.txt
[2025-04-15 13:35:08] HITS file was successfully produced:
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas 203003788 Apr 15 13:29 shared/HITS.pool.root.1
[2025-04-15 13:35:08]  *** Contents of shared directory: ***
[2025-04-15 13:35:08] total 415408
[2025-04-15 13:35:08] -rw-r--r-- 3 boincer umatlas 218524947 Apr 15 03:25 ATLAS.root_0
[2025-04-15 13:35:08] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 03:25 start_atlas.sh
[2025-04-15 13:35:08] -rw-r--r-- 2 boincer umatlas    508888 Apr 15 03:25 input.tar.gz
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas 203003788 Apr 15 13:29 HITS.pool.root.1
[2025-04-15 13:35:08] -rw------- 1 boincer umatlas   3307520 Apr 15 13:35 result.tar.gz
13:35:09 (15661): run_atlas exited; CPU time 100301.751049
13:35:09 (15661): called boinc_finish(0)

</stderr_txt>
]]>

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