Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:40:40 (19498): wrapper (7.7.26015): starting
02:40:40 (19498): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 02:40:40] Arguments: --nthreads 12
[2025-04-15 02:40:40] Threads: 12
[2025-04-15 02:40:40] Checking for CVMFS
[2025-04-15 02:40:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 02:40:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 02:40:40] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 02:40:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 02:40:40] 2.11.2.0 13814 393271 162956 144878 2 58 14813518 20275200 1 130560 0 18621755 99.989 5651128 53374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 02:40:40] CVMFS is ok
[2025-04-15 02:40:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 02:40:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 02:40:40] Further information can be found at the LHC@home message board.
[2025-04-15 02:40:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 02:40:40] Checking for apptainer binary...
[2025-04-15 02:40:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 02:40:40] Running /usr/bin/apptainer --version
[2025-04-15 02:40:40] apptainer version 1.3.2-1.el7
[2025-04-15 02:40:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 02:40:42] c-205-7.aglt2.org
[2025-04-15 02:40:42] apptainer works
[2025-04-15 02:40:42] Set ATHENA_PROC_NUMBER=12
[2025-04-15 02:40:42] Set ATHENA_CORE_NUMBER=12
[2025-04-15 02:40:42] Starting ATLAS job with PandaID=6603669893
[2025-04-15 02:40:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 04:04:16]  *** The last 200 lines of the pilot log: ***
[2025-04-15 04:04:16]  protocol_id=None
[2025-04-15 04:04:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-15 04:04:16]  replicas=None
[2025-04-15 04:04:16]  scope=mc23_13p6TeV
[2025-04-15 04:04:16]  status=None
[2025-04-15 04:04:16]  status_code=0
[2025-04-15 04:04:16]  storage_token=
[2025-04-15 04:04:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603669893/log.44075164._057303.job.log.tgz.1
[2025-04-15 04:04:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/dd/log.44075164._057303.job.log.tgz.1
[2025-04-15 04:04:16]  workdir=None
[2025-04-15 04:04:16] ]
[2025-04-15 04:04:16] 2025-04-15 08:03:51,984 | INFO     | transferring file log.44075164._057303.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603669893/log.44075164._057303.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-15 04:04:16] 2025-04-15 08:03:51,984 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603669893/log.44075164._057303.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075164._057303.job
[2025-04-15 04:04:16] 2025-04-15 08:03:52,008 | INFO     | adding to output.list: log.44075164._057303.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/dd/log.44075164._057303.job.log.tg
[2025-04-15 04:04:16] 2025-04-15 08:03:52,009 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 04:04:16] 2025-04-15 08:03:52,009 | INFO     | summary of transferred files:
[2025-04-15 04:04:16] 2025-04-15 08:03:52,010 | INFO     |  -- lfn=log.44075164._057303.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 04:04:16] 2025-04-15 08:03:52,010 | INFO     | stage-out finished correctly
[2025-04-15 04:04:16] 2025-04-15 08:03:53,441 | INFO     | monitor loop #371: job 0:6603669893 is in state 'finished'
[2025-04-15 04:04:16] 2025-04-15 08:03:53,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 04:04:16] 2025-04-15 08:03:55,384 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 04:04:16] 2025-04-15 08:03:55,948 | INFO     | monitor loop #372: job 0:6603669893 is in state 'finished'
[2025-04-15 04:04:16] 2025-04-15 08:03:55,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 04:04:16] 2025-04-15 08:03:58,247 | INFO     | job 6603669893 has state=finished
[2025-04-15 04:04:16] 2025-04-15 08:03:58,248 | INFO     | preparing for final server update for job 6603669893 in state='finished'
[2025-04-15 04:04:16] 2025-04-15 08:03:58,248 | INFO     | this job has now completed (state=finished)
[2025-04-15 04:04:16] 2025-04-15 08:03:58,248 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 04:04:16] 2025-04-15 08:03:58,248 | INFO     | log transfer has been attempted: DONE
[2025-04-15 04:04:16] 2025-04-15 08:03:58,249 | INFO     | job 6603669893 has finished - writing final server update
[2025-04-15 04:04:16] 2025-04-15 08:03:58,249 | INFO     | total number of processed events: 400 (read)
[2025-04-15 04:04:16] 2025-04-15 08:03:58,251 | INFO     | executing command: lscpu
[2025-04-15 04:04:16] 2025-04-15 08:03:58,278 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 04:04:16] 2025-04-15 08:03:58,461 | INFO     | monitor loop #373: job 0:6603669893 is in state 'finished'
[2025-04-15 04:04:16] 2025-04-15 08:03:58,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 04:04:16] 2025-04-15 08:04:00,335 | INFO     | 4987s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-15 04:04:16] 2025-04-15 08:04:00,965 | INFO     | monitor loop #374: job 0:6603669893 is in state 'finished'
[2025-04-15 04:04:16] 2025-04-15 08:04:00,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 04:04:16] 2025-04-15 08:04:03,370 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-15 04:04:16] 2025-04-15 08:04:03,370 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603669893/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 04:04:16] 2025-04-15 08:04:03,371 | INFO     | extracted standard info from prmon json
[2025-04-15 04:04:16] 2025-04-15 08:04:03,371 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 04:04:16] 2025-04-15 08:04:03,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 04:04:16] 2025-04-15 08:04:03,372 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 04:04:16] 2025-04-15 08:04:03,372 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 04:04:16] 2025-04-15 08:04:03,375 | INFO     | fitting pss+swap vs Time
[2025-04-15 04:04:16] 2025-04-15 08:04:03,375 | INFO     | sum of square deviations: 130793150.0
[2025-04-15 04:04:16] 2025-04-15 08:04:03,376 | INFO     | sum of deviations: 18183443273.999996
[2025-04-15 04:04:16] 2025-04-15 08:04:03,376 | INFO     | mean x: 1744701846.0
[2025-04-15 04:04:16] 2025-04-15 08:04:03,376 | INFO     | mean y: 2591766.533333333
[2025-04-15 04:04:16] 2025-04-15 08:04:03,377 | INFO     | -- intersect: -242553589859.06464
[2025-04-15 04:04:16] 2025-04-15 08:04:03,377 | INFO     | intersect: -242553589859.06464
[2025-04-15 04:04:16] 2025-04-15 08:04:03,377 | INFO     | chi2: 2.2538146064927274
[2025-04-15 04:04:16] 2025-04-15 08:04:03,377 | INFO     | -- intersect: -242553589859.06464
[2025-04-15 04:04:16] 2025-04-15 08:04:03,377 | INFO     | current memory leak: 139.02 B/s (using 75 data points, chi2=2.25)
[2025-04-15 04:04:16] 2025-04-15 08:04:03,377 | INFO     | ..............................
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . Timing measurements:
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . get job = 0 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . initial setup = 2 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . payload setup = 7 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . stage-in = 0 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . payload execution = 4948 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . stage-out = 0 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | . log creation = 0 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,378 | INFO     | ..............................
[2025-04-15 04:04:16] 2025-04-15 08:04:03,844 | INFO     | 
[2025-04-15 04:04:16] 2025-04-15 08:04:03,844 | INFO     | job summary report
[2025-04-15 04:04:16] 2025-04-15 08:04:03,844 | INFO     | --------------------------------------------------
[2025-04-15 04:04:16] 2025-04-15 08:04:03,845 | INFO     | PanDA job id: 6603669893
[2025-04-15 04:04:16] 2025-04-15 08:04:03,845 | INFO     | task id: 44075164
[2025-04-15 04:04:16] 2025-04-15 08:04:03,845 | INFO     | errors: (none)
[2025-04-15 04:04:16] 2025-04-15 08:04:03,845 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 04:04:16] 2025-04-15 08:04:03,845 | INFO     | pilot state: finished 
[2025-04-15 04:04:16] 2025-04-15 08:04:03,845 | INFO     | transexitcode: 0
[2025-04-15 04:04:16] 2025-04-15 08:04:03,846 | INFO     | exeerrorcode: 0
[2025-04-15 04:04:16] 2025-04-15 08:04:03,846 | INFO     | exeerrordiag: 
[2025-04-15 04:04:16] 2025-04-15 08:04:03,846 | INFO     | exitcode: 0
[2025-04-15 04:04:16] 2025-04-15 08:04:03,846 | INFO     | exitmsg: OK
[2025-04-15 04:04:16] 2025-04-15 08:04:03,846 | INFO     | cpuconsumptiontime: 46776 s
[2025-04-15 04:04:16] 2025-04-15 08:04:03,846 | INFO     | nevents: 400
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | neventsw: 0
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | pid: 29628
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | pgrp: 29628
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | corecount: 12
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | event service: False
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | sizes: {0: 2417277, 5: 2417483, 11: 2417539, 4960: 2443654, 4961: 2452595, 4965: 2452651, 4973: 2452949}
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | --------------------------------------------------
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | 
[2025-04-15 04:04:16] 2025-04-15 08:04:03,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 04:04:16] 2025-04-15 08:04:03,873 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,874 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,876 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 04:04:16] 2025-04-15 08:04:03,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,876 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 04:04:16] 2025-04-15 08:04:03,876 | INFO     | job 6603669893 has completed (purged errors)
[2025-04-15 04:04:16] 2025-04-15 08:04:03,877 | INFO     | overall cleanup function is called
[2025-04-15 04:04:16] 2025-04-15 08:04:04,885 | INFO     | --- collectZombieJob: --- 10, [29628]
[2025-04-15 04:04:16] 2025-04-15 08:04:04,885 | INFO     | zombie collector waiting for pid 29628
[2025-04-15 04:04:16] 2025-04-15 08:04:04,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 04:04:16] 2025-04-15 08:04:04,885 | INFO     | collected zombie processes
[2025-04-15 04:04:16] 2025-04-15 08:04:04,885 | INFO     | will attempt to kill all subprocesses of pid=29628
[2025-04-15 04:04:16] 2025-04-15 08:04:04,979 | INFO     | process IDs to be killed: [29628] (in reverse order)
[2025-04-15 04:04:16] 2025-04-15 08:04:05,071 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 04:04:16] 2025-04-15 08:04:05,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 04:04:16] 2025-04-15 08:04:05,075 | INFO     | did not find any defunct processes belonging to 29628
[2025-04-15 04:04:16] 2025-04-15 08:04:05,078 | INFO     | did not find any defunct processes belonging to 29628
[2025-04-15 04:04:16] 2025-04-15 08:04:05,078 | INFO     | ready for new job
[2025-04-15 04:04:16] 2025-04-15 08:04:05,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 04:04:16] 2025-04-15 08:04:05,079 | INFO     | **************************************
[2025-04-15 04:04:16] 2025-04-15 08:04:05,079 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 04:04:16] 2025-04-15 08:04:05,079 | INFO     | **************************************
[2025-04-15 04:04:16] 2025-04-15 08:04:05,080 | INFO     | 
[2025-04-15 04:04:16] 2025-04-15 08:04:05,080 | INFO     | architecture information:
[2025-04-15 04:04:16] 2025-04-15 08:04:05,081 | INFO     | executing command: cat /etc/os-release
[2025-04-15 04:04:16] 2025-04-15 08:04:05,096 | INFO     | cat /etc/os-release:
[2025-04-15 04:04:16] NAME="CentOS Linux"
[2025-04-15 04:04:16] VERSION="7 (Core)"
[2025-04-15 04:04:16] ID="centos"
[2025-04-15 04:04:16] ID_LIKE="rhel fedora"
[2025-04-15 04:04:16] VERSION_ID="7"
[2025-04-15 04:04:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 04:04:16] ANSI_COLOR="0;31"
[2025-04-15 04:04:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 04:04:16] HOME_URL="https://www.centos.org/"
[2025-04-15 04:04:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 04:04:16] 
[2025-04-15 04:04:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 04:04:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 04:04:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 04:04:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 04:04:16] 
[2025-04-15 04:04:16] 2025-04-15 08:04:05,097 | INFO     | **************************************
[2025-04-15 04:04:16] 2025-04-15 08:04:05,460 | INFO     | PID=23100 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-15 04:04:16] 2025-04-15 08:04:05,598 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 04:04:16] 2025-04-15 08:04:05,615 | INFO     | sufficient remaining disk space (29395779584 B)
[2025-04-15 04:04:16] 2025-04-15 08:04:05,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 04:04:16] 2025-04-15 08:04:05,615 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 04:04:16] 2025-04-15 08:04:05,616 | INFO     | update_server=False
[2025-04-15 04:04:16] 2025-04-15 08:04:05,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 04:04:16] 2025-04-15 08:04:05,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 04:04:16] 2025-04-15 08:04:05,616 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 04:04:16] 2025-04-15 08:04:05,617 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 04:04:16] 2025-04-15 08:04:05,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 04:04:16] 2025-04-15 08:04:05,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 04:04:16] 2025-04-15 08:04:05,692 | INFO     | all data control threads have been joined
[2025-04-15 04:04:16] 2025-04-15 08:04:05,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 04:04:16] 2025-04-15 08:04:05,977 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-15 04:04:16] 2025-04-15 08:04:05,981 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-15 04:04:16] 2025-04-15 08:04:05,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 04:04:16] 2025-04-15 08:04:05,981 | INFO     | will abort loop
[2025-04-15 04:04:16] 2025-04-15 08:04:05,988 | INFO     | all payload control threads have been joined
[2025-04-15 04:04:16] 2025-04-15 08:04:06,621 | INFO     | [job] retrieve thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:06,698 | INFO     | [data] control thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:06,704 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:06,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:06,876 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:06,987 | INFO     | [job] job monitor thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:06,993 | INFO     | [payload] control thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:07,099 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:07,256 | INFO     | all job control threads have been joined
[2025-04-15 04:04:16] 2025-04-15 08:04:07,404 | INFO     | [data] copytool_in thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:07,622 | INFO     | [data] copytool_out thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:07,788 | INFO     | [payload] validate_post thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:07,865 | INFO     | [job] validate thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:08,160 | INFO     | [payload] failed_post thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:08,261 | INFO     | [job] control thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:08,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 04:04:16] 2025-04-15 08:04:09,475 | INFO     | [job] queue monitor thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:09,979 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 04:04:16] 2025-04-15 08:04:11,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027769050944)>', '<ExcThread(monitor, started 140026671265536)>']
[2025-04-15 04:04:16] 2025-04-15 08:04:11,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 04:04:16] 2025-04-15 08:04:11,648 | INFO     | [monitor] control thread has ended
[2025-04-15 04:04:16] 2025-04-15 08:04:16,111 | INFO     | all workflow threads have been joined
[2025-04-15 04:04:16] 2025-04-15 08:04:16,118 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 04:04:16] 2025-04-15 08:04:16,118 | INFO     | traces error code: 0
[2025-04-15 04:04:16] 2025-04-15 08:04:16,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 04:04:16] 2025-04-15 08:04:16,217 [wrapper] ==== pilot stdout END ====
[2025-04-15 04:04:16] 2025-04-15 08:04:16,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 04:04:16] 2025-04-15 08:04:16,225 [wrapper] pilotpid: 23100
[2025-04-15 04:04:16] 2025-04-15 08:04:16,229 [wrapper] Pilot exit status: 0
[2025-04-15 04:04:16] 2025-04-15 08:04:16,244 [wrapper] pandaids: 6603669893
[2025-04-15 04:04:16] 2025-04-15 08:04:16,283 [wrapper] cleanup supervisor_pilot 10135 23101
[2025-04-15 04:04:16] 2025-04-15 08:04:16,287 [wrapper] Test setup, not cleaning
[2025-04-15 04:04:16] 2025-04-15 08:04:16,291 [wrapper] apfmon messages muted
[2025-04-15 04:04:16] 2025-04-15 08:04:16,295 [wrapper] ==== wrapper stdout END ====
[2025-04-15 04:04:16] 2025-04-15 08:04:16,299 [wrapper] ==== wrapper stderr END ====
[2025-04-15 04:04:16]  *** Error codes and diagnostics ***
[2025-04-15 04:04:16]     "exeErrorCode": 0,
[2025-04-15 04:04:16]     "exeErrorDiag": "",
[2025-04-15 04:04:16]     "pilotErrorCode": 0,
[2025-04-15 04:04:16]     "pilotErrorDiag": "",
[2025-04-15 04:04:16]  *** Listing of results directory ***
[2025-04-15 04:04:16] total 413236
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 18:30 pilot3.tar.gz
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 18:35 queuedata.json
[2025-04-15 04:04:16] -rwx------ 1 boincer umatlas     37140 Apr 14 18:35 runpilot2-wrapper.sh
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas       100 Apr 15 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 04:04:16] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 02:40 run_atlas
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas       105 Apr 15 02:40 job.xml
[2025-04-15 04:04:16] -rw-r--r-- 2 boincer umatlas 222080437 Apr 15 02:40 EVNT.44075162._002122.pool.root.1
[2025-04-15 04:04:16] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 02:40 start_atlas.sh
[2025-04-15 04:04:16] drwxrwx--x 2 boincer umatlas      4096 Apr 15 02:40 shared
[2025-04-15 04:04:16] -rw-r--r-- 2 boincer umatlas    508893 Apr 15 02:40 input.tar.gz
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas         0 Apr 15 02:40 boinc_lockfile
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas      2550 Apr 15 02:40 pandaJob.out
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas       424 Apr 15 02:40 setup.sh.local
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas    983969 Apr 15 02:40 agis_schedconf.cvmfs.json
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas   1603529 Apr 15 02:40 agis_ddmendpoints.agis.ALL.json
[2025-04-15 04:04:16] drwx------ 4 boincer umatlas      4096 Apr 15 02:40 pilot3
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas      5867 Apr 15 04:01 init_data.xml
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas 195545699 Apr 15 04:03 HITS.44075164._057303.pool.root.1
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas       530 Apr 15 04:03 boinc_task_state.xml
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas      1049 Apr 15 04:03 memory_monitor_summary.json
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas    371405 Apr 15 04:03 log.44075164._057303.job.log.tgz.1
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas        95 Apr 15 04:03 pilot_heartbeat.json
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas      7753 Apr 15 04:04 heartbeat.json
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas        27 Apr 15 04:04 wrapper_checkpoint.txt
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 04:04 boinc_mmap_file
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas      4979 Apr 15 04:04 pilotlog.txt
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas    473044 Apr 15 04:04 log.44075164._057303.job.log.1
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas       357 Apr 15 04:04 output.list
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas       620 Apr 15 04:04 runtime_log
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas    860160 Apr 15 04:04 result.tar.gz
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas     11010 Apr 15 04:04 runtime_log.err
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas       657 Apr 15 04:04 mZJMDmQahO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmS2WLDmKUjjQm.diag
[2025-04-15 04:04:16] -rw-r--r-- 1 boincer umatlas     21847 Apr 15 04:04 stderr.txt
[2025-04-15 04:04:16] HITS file was successfully produced:
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas 195545699 Apr 15 04:03 shared/HITS.pool.root.1
[2025-04-15 04:04:16]  *** Contents of shared directory: ***
[2025-04-15 04:04:16] total 409208
[2025-04-15 04:04:16] -rw-r--r-- 2 boincer umatlas 222080437 Apr 15 02:40 ATLAS.root_0
[2025-04-15 04:04:16] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 02:40 start_atlas.sh
[2025-04-15 04:04:16] -rw-r--r-- 2 boincer umatlas    508893 Apr 15 02:40 input.tar.gz
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas 195545699 Apr 15 04:03 HITS.pool.root.1
[2025-04-15 04:04:16] -rw------- 1 boincer umatlas    860160 Apr 15 04:04 result.tar.gz
04:04:18 (19498): run_atlas exited; CPU time 46762.978866
04:04:18 (19498): called boinc_finish(0)

</stderr_txt>
]]>

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