Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:21:17 (3131694): wrapper (7.7.26015): starting
14:21:17 (3131694): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 14:21:17] Arguments: --nthreads 12
[2025-04-15 14:21:17] Threads: 12
[2025-04-15 14:21:17] Checking for CVMFS
[2025-04-15 14:21:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 14:21:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 14:21:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 14:21:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 14:21:17] 2.12.7.0 2534634 14716 247200 144888 2 395 24355762 46080000 18308 130560 0 153365225 99.917 35632355 4430 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-15 14:21:17] CVMFS is ok
[2025-04-15 14:21:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 14:21:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 14:21:17] Further information can be found at the LHC@home message board.
[2025-04-15 14:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 14:21:17] Checking for apptainer binary...
[2025-04-15 14:21:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 14:21:17] Running /usr/bin/apptainer --version
[2025-04-15 14:21:17] apptainer version 1.3.6-1.el9
[2025-04-15 14:21:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 14:21:18] mff2103.farm.particle.cz
[2025-04-15 14:21:18] apptainer works
[2025-04-15 14:21:18] Set ATHENA_PROC_NUMBER=12
[2025-04-15 14:21:18] Set ATHENA_CORE_NUMBER=12
[2025-04-15 14:21:18] Starting ATLAS job with PandaID=6602906230
[2025-04-15 14:21:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 15:39:54]  *** The last 200 lines of the pilot log: ***
[2025-04-15 15:39:54]  is_tar=False
[2025-04-15 15:39:54]  lfn=log.44075164._057040.job.log.tgz.1
[2025-04-15 15:39:54]  mtime=0
[2025-04-15 15:39:54]  protocol_id=None
[2025-04-15 15:39:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-15 15:39:54]  replicas=None
[2025-04-15 15:39:54]  scope=mc23_13p6TeV
[2025-04-15 15:39:54]  status=None
[2025-04-15 15:39:54]  status_code=0
[2025-04-15 15:39:54]  storage_token=
[2025-04-15 15:39:54]  surl=/scratch/.boinc/slots/4/PanDA_Pilot-6602906230/log.44075164._057040.job.log.tgz.1
[2025-04-15 15:39:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/ea/log.44075164._057040.job.log.tgz.1
[2025-04-15 15:39:54]  workdir=None
[2025-04-15 15:39:54] ]
[2025-04-15 15:39:54] 2025-04-15 13:39:26,232 | INFO     | transferring file log.44075164._057040.job.log.tgz.1 from /scratch/.boinc/slots/4/PanDA_Pilot-6602906230/log.44075164._057040.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-15 15:39:54] 2025-04-15 13:39:26,233 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/4/PanDA_Pilot-6602906230/log.44075164._057040.job.log.tgz.1 /scratch/.boinc/slots/4/log.44075164._057040.j
[2025-04-15 15:39:54] 2025-04-15 13:39:26,254 | INFO     | adding to output.list: log.44075164._057040.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/ea/log.44075164._057040.job.log.tg
[2025-04-15 15:39:54] 2025-04-15 13:39:26,255 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-15 15:39:54] 2025-04-15 13:39:26,255 | INFO     | summary of transferred files:
[2025-04-15 15:39:54] 2025-04-15 13:39:26,255 | INFO     |  -- lfn=log.44075164._057040.job.log.tgz.1, status_code=0, status=transferred
[2025-04-15 15:39:54] 2025-04-15 13:39:26,255 | INFO     | stage-out finished correctly
[2025-04-15 15:39:54] 2025-04-15 13:39:27,399 | INFO     | monitor loop #327: job 0:6602906230 is in state 'finished'
[2025-04-15 15:39:54] 2025-04-15 13:39:27,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 15:39:54] 2025-04-15 13:39:27,774 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-15 15:39:54] 2025-04-15 13:39:28,433 | INFO     | job 6602906230 has state=finished
[2025-04-15 15:39:54] 2025-04-15 13:39:28,433 | INFO     | preparing for final server update for job 6602906230 in state='finished'
[2025-04-15 15:39:54] 2025-04-15 13:39:28,434 | INFO     | this job has now completed (state=finished)
[2025-04-15 15:39:54] 2025-04-15 13:39:28,434 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-15 15:39:54] 2025-04-15 13:39:28,434 | INFO     | log transfer has been attempted: DONE
[2025-04-15 15:39:54] 2025-04-15 13:39:28,434 | INFO     | job 6602906230 has finished - writing final server update
[2025-04-15 15:39:54] 2025-04-15 13:39:28,434 | INFO     | total number of processed events: 400 (read)
[2025-04-15 15:39:54] 2025-04-15 13:39:28,441 | INFO     | executing command: lscpu
[2025-04-15 15:39:54] 2025-04-15 13:39:28,536 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-15 15:39:54] 2025-04-15 13:39:29,903 | INFO     | monitor loop #328: job 0:6602906230 is in state 'finished'
[2025-04-15 15:39:54] 2025-04-15 13:39:29,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 15:39:54] 2025-04-15 13:39:32,212 | INFO     | PID=3139202 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-15 15:39:54] 2025-04-15 13:39:32,212 | INFO     | .. there are 29 such processes running
[2025-04-15 15:39:54] 2025-04-15 13:39:32,406 | INFO     | monitor loop #329: job 0:6602906230 is in state 'finished'
[2025-04-15 15:39:54] 2025-04-15 13:39:32,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 15:39:54] 2025-04-15 13:39:33,851 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-15 15:39:54] 2025-04-15 13:39:33,851 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6602906230/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 15:39:54] 2025-04-15 13:39:33,852 | INFO     | extracted standard info from prmon json
[2025-04-15 15:39:54] 2025-04-15 13:39:33,852 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 15:39:54] 2025-04-15 13:39:33,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 15:39:54] 2025-04-15 13:39:33,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 15:39:54] 2025-04-15 13:39:33,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 15:39:54] 2025-04-15 13:39:33,854 | INFO     | fitting pss+swap vs Time
[2025-04-15 15:39:54] 2025-04-15 13:39:33,854 | INFO     | sum of square deviations: 106336877.5
[2025-04-15 15:39:54] 2025-04-15 13:39:33,854 | INFO     | sum of deviations: 19354988656.0
[2025-04-15 15:39:54] 2025-04-15 13:39:33,854 | INFO     | mean x: 1744722130.5
[2025-04-15 15:39:54] 2025-04-15 13:39:33,854 | INFO     | mean y: 2591911.0
[2025-04-15 15:39:54] 2025-04-15 13:39:33,854 | INFO     | -- intersect: -317564350410.5822
[2025-04-15 15:39:54] 2025-04-15 13:39:33,854 | INFO     | intersect: -317564350410.5822
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | chi2: 1.9304421258846798
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | -- intersect: -317564350410.5822
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | current memory leak: 182.02 B/s (using 70 data points, chi2=1.93)
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | ..............................
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | . Timing measurements:
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | . get job = 0 s
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | . initial setup = 1 s
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | . payload setup = 7 s
[2025-04-15 15:39:54] 2025-04-15 13:39:33,855 | INFO     | . stage-in = 0 s
[2025-04-15 15:39:54] 2025-04-15 13:39:33,856 | INFO     | . payload execution = 4647 s
[2025-04-15 15:39:54] 2025-04-15 13:39:33,856 | INFO     | . stage-out = 0 s
[2025-04-15 15:39:54] 2025-04-15 13:39:33,856 | INFO     | . log creation = 0 s
[2025-04-15 15:39:54] 2025-04-15 13:39:33,856 | INFO     | ..............................
[2025-04-15 15:39:54] 2025-04-15 13:39:34,072 | INFO     | 
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | job summary report
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | --------------------------------------------------
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | PanDA job id: 6602906230
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | task id: 44075164
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | errors: (none)
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | pilot state: finished 
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | transexitcode: 0
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | exeerrorcode: 0
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | exeerrordiag: 
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | exitcode: 0
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | exitmsg: OK
[2025-04-15 15:39:54] 2025-04-15 13:39:34,073 | INFO     | cpuconsumptiontime: 37310 s
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | nevents: 400
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | neventsw: 0
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | pid: 3154172
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | pgrp: 3154172
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | corecount: 12
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | event service: False
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | sizes: {0: 2417227, 6: 2417433, 11: 2417461, 4658: 2443706, 4659: 2452704, 4661: 2452704, 4667: 2453002}
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | --------------------------------------------------
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | 
[2025-04-15 15:39:54] 2025-04-15 13:39:34,074 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2025-04-15 15:39:54] 2025-04-15 13:39:34,099 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,099 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,099 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 15:39:54] 2025-04-15 13:39:34,101 | INFO     | job 6602906230 has completed (purged errors)
[2025-04-15 15:39:54] 2025-04-15 13:39:34,101 | INFO     | overall cleanup function is called
[2025-04-15 15:39:54] 2025-04-15 13:39:35,109 | INFO     | --- collectZombieJob: --- 10, [3154172]
[2025-04-15 15:39:54] 2025-04-15 13:39:35,110 | INFO     | zombie collector waiting for pid 3154172
[2025-04-15 15:39:54] 2025-04-15 13:39:35,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 15:39:54] 2025-04-15 13:39:35,110 | INFO     | collected zombie processes
[2025-04-15 15:39:54] 2025-04-15 13:39:35,110 | INFO     | will attempt to kill all subprocesses of pid=3154172
[2025-04-15 15:39:54] 2025-04-15 13:39:35,572 | INFO     | process IDs to be killed: [3154172] (in reverse order)
[2025-04-15 15:39:54] 2025-04-15 13:39:35,718 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 15:39:54] 2025-04-15 13:39:35,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 15:39:54] 2025-04-15 13:39:35,735 | INFO     | did not find any defunct processes belonging to 3154172
[2025-04-15 15:39:54] 2025-04-15 13:39:35,749 | INFO     | did not find any defunct processes belonging to 3154172
[2025-04-15 15:39:54] 2025-04-15 13:39:35,749 | INFO     | ready for new job
[2025-04-15 15:39:54] 2025-04-15 13:39:35,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 15:39:54] 2025-04-15 13:39:35,751 | INFO     | **************************************
[2025-04-15 15:39:54] 2025-04-15 13:39:35,752 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 15:39:54] 2025-04-15 13:39:35,752 | INFO     | **************************************
[2025-04-15 15:39:54] 2025-04-15 13:39:35,752 | INFO     | 
[2025-04-15 15:39:54] 2025-04-15 13:39:35,758 | INFO     | architecture information:
[2025-04-15 15:39:54] 2025-04-15 13:39:35,759 | INFO     | executing command: cat /etc/os-release
[2025-04-15 15:39:54] 2025-04-15 13:39:35,782 | INFO     | cat /etc/os-release:
[2025-04-15 15:39:54] NAME="CentOS Linux"
[2025-04-15 15:39:54] VERSION="7 (Core)"
[2025-04-15 15:39:54] ID="centos"
[2025-04-15 15:39:54] ID_LIKE="rhel fedora"
[2025-04-15 15:39:54] VERSION_ID="7"
[2025-04-15 15:39:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 15:39:54] ANSI_COLOR="0;31"
[2025-04-15 15:39:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 15:39:54] HOME_URL="https://www.centos.org/"
[2025-04-15 15:39:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 15:39:54] 
[2025-04-15 15:39:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 15:39:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 15:39:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 15:39:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 15:39:54] 
[2025-04-15 15:39:54] 2025-04-15 13:39:35,782 | INFO     | **************************************
[2025-04-15 15:39:54] 2025-04-15 13:39:36,285 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2025-04-15 15:39:54] 2025-04-15 13:39:36,310 | INFO     | sufficient remaining disk space (1664293535744 B)
[2025-04-15 15:39:54] 2025-04-15 13:39:36,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 15:39:54] 2025-04-15 13:39:36,310 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 15:39:54] 2025-04-15 13:39:36,311 | INFO     | update_server=False
[2025-04-15 15:39:54] 2025-04-15 13:39:36,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 15:39:54] 2025-04-15 13:39:36,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:39:54] 2025-04-15 13:39:36,311 | INFO     | aborting loop
[2025-04-15 15:39:54] 2025-04-15 13:39:36,311 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 15:39:54] 2025-04-15 13:39:36,312 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 15:39:54] 2025-04-15 13:39:36,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 15:39:54] 2025-04-15 13:39:36,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 15:39:54] 2025-04-15 13:39:36,491 | INFO     | all job control threads have been joined
[2025-04-15 15:39:54] 2025-04-15 13:39:36,669 | INFO     | all payload control threads have been joined
[2025-04-15 15:39:54] 2025-04-15 13:39:36,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 15:39:54] 2025-04-15 13:39:36,997 | INFO     | all data control threads have been joined
[2025-04-15 15:39:54] 2025-04-15 13:39:37,316 | INFO     | [job] job monitor thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:37,317 | INFO     | [job] retrieve thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:37,494 | INFO     | [job] control thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:37,645 | INFO     | [payload] failed_post thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:37,672 | INFO     | [payload] control thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:37,687 | INFO     | [payload] validate_post thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,003 | INFO     | [data] control thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 15:39:54] 2025-04-15 13:39:38,398 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,411 | INFO     | [job] validate thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,581 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,582 | INFO     | [data] copytool_in thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,800 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,873 | INFO     | [data] copytool_out thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:38,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:39:54] 2025-04-15 13:39:39,960 | INFO     | [job] queue monitor thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:42,387 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:47,180 | INFO     | job.realtimelogging is not enabled
[2025-04-15 15:39:54] 2025-04-15 13:39:48,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 15:39:54] 2025-04-15 13:39:48,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276797384512)>', '<ExcThread(monitor, started 140276165236480)>']
[2025-04-15 15:39:54] 2025-04-15 13:39:49,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 15:39:54] 2025-04-15 13:39:49,378 | INFO     | [monitor] control thread has ended
[2025-04-15 15:39:54] 2025-04-15 13:39:53,873 | INFO     | all workflow threads have been joined
[2025-04-15 15:39:54] 2025-04-15 13:39:53,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 15:39:54] 2025-04-15 13:39:53,874 | INFO     | traces error code: 0
[2025-04-15 15:39:54] 2025-04-15 13:39:53,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 15:39:54] 2025-04-15 13:39:54,006 [wrapper] ==== pilot stdout END ====
[2025-04-15 15:39:54] 2025-04-15 13:39:54,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 15:39:54] 2025-04-15 13:39:54,014 [wrapper] pilotpid: 3139202
[2025-04-15 15:39:54] 2025-04-15 13:39:54,017 [wrapper] Pilot exit status: 0
[2025-04-15 15:39:54] 2025-04-15 13:39:54,031 [wrapper] pandaids: 6602906230
[2025-04-15 15:39:54] 2025-04-15 13:39:54,134 [wrapper] cleanup supervisor_pilot 3454767 3139203
[2025-04-15 15:39:54] 2025-04-15 13:39:54,138 [wrapper] Test setup, not cleaning
[2025-04-15 15:39:54] 2025-04-15 13:39:54,142 [wrapper] apfmon messages muted
[2025-04-15 15:39:54] 2025-04-15 13:39:54,145 [wrapper] ==== wrapper stdout END ====
[2025-04-15 15:39:54] 2025-04-15 13:39:54,149 [wrapper] ==== wrapper stderr END ====
[2025-04-15 15:39:54]  *** Error codes and diagnostics ***
[2025-04-15 15:39:54]     "exeErrorCode": 0,
[2025-04-15 15:39:54]     "exeErrorDiag": "",
[2025-04-15 15:39:54]     "pilotErrorCode": 0,
[2025-04-15 15:39:54]     "pilotErrorDiag": "",
[2025-04-15 15:39:54]  *** Listing of results directory ***
[2025-04-15 15:39:54] total 408136
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc    495897 Apr 14 23:15 pilot3.tar.gz
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc      5111 Apr 14 23:52 queuedata.json
[2025-04-15 15:39:54] -rwx------ 1 boinc boinc     37140 Apr 14 23:52 runpilot2-wrapper.sh
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc       100 Apr 15 14:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 15:39:54] -rwxr-xr-x 1 boinc boinc      7986 Apr 15 14:21 run_atlas
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc       105 Apr 15 14:21 job.xml
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc      6654 Apr 15 14:21 init_data.xml
[2025-04-15 15:39:54] -rw-r--r-- 2 boinc boinc 222589425 Apr 15 14:21 EVNT.44075162._001875.pool.root.1
[2025-04-15 15:39:54] -rw-r--r-- 2 boinc boinc     17569 Apr 15 14:21 start_atlas.sh
[2025-04-15 15:39:54] drwxrwx--x 2 boinc boinc      4096 Apr 15 14:21 shared
[2025-04-15 15:39:54] -rw-r--r-- 2 boinc boinc    508885 Apr 15 14:21 input.tar.gz
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc         0 Apr 15 14:21 boinc_lockfile
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc      2549 Apr 15 14:21 pandaJob.out
[2025-04-15 15:39:54] -rw------- 1 boinc boinc       424 Apr 15 14:21 setup.sh.local
[2025-04-15 15:39:54] -rw------- 1 boinc boinc    984001 Apr 15 14:21 agis_schedconf.cvmfs.json
[2025-04-15 15:39:54] -rw------- 1 boinc boinc   1603529 Apr 15 14:21 agis_ddmendpoints.agis.ALL.json
[2025-04-15 15:39:54] drwx------ 4 boinc boinc      4096 Apr 15 14:21 pilot3
[2025-04-15 15:39:54] -rw------- 1 boinc boinc        95 Apr 15 15:38 pilot_heartbeat.json
[2025-04-15 15:39:54] -rw------- 1 boinc boinc 189868817 Apr 15 15:38 HITS.44075164._057040.pool.root.1
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc       529 Apr 15 15:38 boinc_task_state.xml
[2025-04-15 15:39:54] -rw------- 1 boinc boinc      1023 Apr 15 15:39 memory_monitor_summary.json
[2025-04-15 15:39:54] -rw------- 1 boinc boinc    361704 Apr 15 15:39 log.44075164._057040.job.log.tgz.1
[2025-04-15 15:39:54] -rw------- 1 boinc boinc      7689 Apr 15 15:39 heartbeat.json
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc      8192 Apr 15 15:39 boinc_mmap_file
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc        27 Apr 15 15:39 wrapper_checkpoint.txt
[2025-04-15 15:39:54] -rw------- 1 boinc boinc      4551 Apr 15 15:39 pilotlog.txt
[2025-04-15 15:39:54] -rw------- 1 boinc boinc    450716 Apr 15 15:39 log.44075164._057040.job.log.1
[2025-04-15 15:39:54] -rw------- 1 boinc boinc       357 Apr 15 15:39 output.list
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc       620 Apr 15 15:39 runtime_log
[2025-04-15 15:39:54] -rw------- 1 boinc boinc    829440 Apr 15 15:39 result.tar.gz
[2025-04-15 15:39:54] -rw------- 1 boinc boinc       663 Apr 15 15:39 tQJMDmwtgO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgyWLDmtNvtGo.diag
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc     11078 Apr 15 15:39 runtime_log.err
[2025-04-15 15:39:54] -rw-r--r-- 1 boinc boinc     21588 Apr 15 15:39 stderr.txt
[2025-04-15 15:39:54] HITS file was successfully produced:
[2025-04-15 15:39:54] -rw------- 1 boinc boinc 189868817 Apr 15 15:38 shared/HITS.pool.root.1
[2025-04-15 15:39:54]  *** Contents of shared directory: ***
[2025-04-15 15:39:54] total 404136
[2025-04-15 15:39:54] -rw-r--r-- 2 boinc boinc 222589425 Apr 15 14:21 ATLAS.root_0
[2025-04-15 15:39:54] -rw-r--r-- 2 boinc boinc     17569 Apr 15 14:21 start_atlas.sh
[2025-04-15 15:39:54] -rw-r--r-- 2 boinc boinc    508885 Apr 15 14:21 input.tar.gz
[2025-04-15 15:39:54] -rw------- 1 boinc boinc 189868817 Apr 15 15:38 HITS.pool.root.1
[2025-04-15 15:39:54] -rw------- 1 boinc boinc    829440 Apr 15 15:39 result.tar.gz
15:39:55 (3131694): run_atlas exited; CPU time 37432.799293
15:39:55 (3131694): called boinc_finish(0)

</stderr_txt>
]]>

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