Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:46:03 (10758): wrapper (7.7.26015): starting
01:46:03 (10758): wrapper: running run_atlas (--nthreads 10)
[2025-04-15 01:46:03] Arguments: --nthreads 10
[2025-04-15 01:46:03] Threads: 10
[2025-04-15 01:46:03] Checking for CVMFS
[2025-04-15 01:46:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 01:46:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 01:46:05] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 01:46:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 01:46:07] 2.11.2.0 12223 22687 114744 144876 2 106 16912634 18432000 9537 130560 0 48117294 98.526 157953121 39237 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 01:46:07] CVMFS is ok
[2025-04-15 01:46:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 01:46:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 01:46:07] Further information can be found at the LHC@home message board.
[2025-04-15 01:46:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 01:46:07] Checking for apptainer binary...
[2025-04-15 01:46:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 01:46:07] Running /usr/bin/apptainer --version
[2025-04-15 01:46:08] apptainer version 1.3.2-1.el7
[2025-04-15 01:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 01:46:35] c-210-19.aglt2.org
[2025-04-15 01:46:35] apptainer works
[2025-04-15 01:46:35] Set ATHENA_PROC_NUMBER=10
[2025-04-15 01:46:35] Set ATHENA_CORE_NUMBER=10
[2025-04-15 01:46:35] Starting ATLAS job with PandaID=6602375798
[2025-04-15 01:46:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 08:27:51]  *** The last 200 lines of the pilot log: ***
[2025-04-15 08:27:51] 2025-04-15 12:27:13,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 08:27:51] 2025-04-15 12:27:16,259 | INFO     | monitor loop #1497: job 0:6602375798 is in state 'finished'
[2025-04-15 08:27:51] 2025-04-15 12:27:16,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 08:27:51] 2025-04-15 12:27:18,772 | INFO     | monitor loop #1498: job 0:6602375798 is in state 'finished'
[2025-04-15 08:27:51] 2025-04-15 12:27:18,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 08:27:51] 2025-04-15 12:27:21,299 | INFO     | monitor loop #1499: job 0:6602375798 is in state 'finished'
[2025-04-15 08:27:51] 2025-04-15 12:27:21,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 08:27:51] 2025-04-15 12:27:23,824 | INFO     | monitor loop #1500: job 0:6602375798 is in state 'finished'
[2025-04-15 08:27:51] 2025-04-15 12:27:23,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 08:27:51] 2025-04-15 12:27:26,331 | INFO     | monitor loop #1501: job 0:6602375798 is in state 'finished'
[2025-04-15 08:27:51] 2025-04-15 12:27:26,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 08:27:51] 2025-04-15 12:27:28,840 | INFO     | monitor loop #1502: job 0:6602375798 is in state 'finished'
[2025-04-15 08:27:51] 2025-04-15 12:27:28,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,048 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-15 08:27:51] 2025-04-15 12:27:31,048 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6602375798/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,049 | INFO     | extracted standard info from prmon json
[2025-04-15 08:27:51] 2025-04-15 12:27:31,065 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 08:27:51] 2025-04-15 12:27:31,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 08:27:51] 2025-04-15 12:27:31,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 08:27:51] 2025-04-15 12:27:31,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 08:27:51] 2025-04-15 12:27:31,083 | INFO     | fitting pss+swap vs Time
[2025-04-15 08:27:51] 2025-04-15 12:27:31,084 | INFO     | sum of square deviations: 17557582740.539062
[2025-04-15 08:27:51] 2025-04-15 12:27:31,101 | INFO     | sum of deviations: 624943147057.7891
[2025-04-15 08:27:51] 2025-04-15 12:27:31,101 | INFO     | mean x: 1744708257.1484375
[2025-04-15 08:27:51] 2025-04-15 12:27:31,101 | INFO     | mean y: 2378265.2317708335
[2025-04-15 08:27:51] 2025-04-15 12:27:31,102 | INFO     | -- intersect: -62098623053.277664
[2025-04-15 08:27:51] 2025-04-15 12:27:31,102 | INFO     | intersect: -62098623053.277664
[2025-04-15 08:27:51] 2025-04-15 12:27:31,107 | INFO     | chi2: 21.582099498989024
[2025-04-15 08:27:51] 2025-04-15 12:27:31,108 | INFO     | sum of square deviations: 16880650550.026375
[2025-04-15 08:27:51] 2025-04-15 12:27:31,116 | INFO     | sum of deviations: 722330727718.591
[2025-04-15 08:27:51] 2025-04-15 12:27:31,117 | INFO     | mean x: 1744708104.651715
[2025-04-15 08:27:51] 2025-04-15 12:27:31,117 | INFO     | mean y: 2400144.3984168866
[2025-04-15 08:27:51] 2025-04-15 12:27:31,117 | INFO     | -- intersect: -74654454528.04355
[2025-04-15 08:27:51] 2025-04-15 12:27:31,117 | INFO     | intersect: -74654454528.04355
[2025-04-15 08:27:51] 2025-04-15 12:27:31,118 | INFO     | chi2: 18.427793428298763
[2025-04-15 08:27:51] 2025-04-15 12:27:31,118 | INFO     | current chi2=18.427793428298763 (change=14.615381005161332 %)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,118 | INFO     | right removable region: 378
[2025-04-15 08:27:51] 2025-04-15 12:27:31,119 | INFO     | sum of square deviations: 16880545263.409048
[2025-04-15 08:27:51] 2025-04-15 12:27:31,145 | INFO     | sum of deviations: 491441422875.8944
[2025-04-15 08:27:51] 2025-04-15 12:27:31,145 | INFO     | mean x: 1744708409.6569922
[2025-04-15 08:27:51] 2025-04-15 12:27:31,145 | INFO     | mean y: 2408329.153034301
[2025-04-15 08:27:51] 2025-04-15 12:27:31,145 | INFO     | -- intersect: -50791092115.643234
[2025-04-15 08:27:51] 2025-04-15 12:27:31,145 | INFO     | intersect: -50791092115.643234
[2025-04-15 08:27:51] 2025-04-15 12:27:31,146 | INFO     | chi2: 16.21881990986561
[2025-04-15 08:27:51] 2025-04-15 12:27:31,146 | INFO     | current chi2=16.21881990986561 (change=24.85059245220628 %)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,147 | INFO     | left removable region: 10
[2025-04-15 08:27:51] 2025-04-15 12:27:31,164 | INFO     | sum of square deviations: 15452923524.214699
[2025-04-15 08:27:51] 2025-04-15 12:27:31,177 | INFO     | sum of deviations: 473272409970.10583
[2025-04-15 08:27:51] 2025-04-15 12:27:31,178 | INFO     | mean x: 1744708379.1711957
[2025-04-15 08:27:51] 2025-04-15 12:27:31,178 | INFO     | mean y: 2457747.2364130435
[2025-04-15 08:27:51] 2025-04-15 12:27:31,178 | INFO     | -- intersect: -53432242684.140465
[2025-04-15 08:27:51] 2025-04-15 12:27:31,178 | INFO     | intersect: -53432242684.140465
[2025-04-15 08:27:51] 2025-04-15 12:27:31,179 | INFO     | chi2: 9.24696852511434
[2025-04-15 08:27:51] 2025-04-15 12:27:31,179 | INFO     | -- intersect: -53432242684.140465
[2025-04-15 08:27:51] 2025-04-15 12:27:31,179 | INFO     | current memory leak: 30.63 B/s (using 368 data points, chi2=9.25)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,181 | INFO     | ..............................
[2025-04-15 08:27:51] 2025-04-15 12:27:31,181 | INFO     | . Timing measurements:
[2025-04-15 08:27:51] 2025-04-15 12:27:31,181 | INFO     | . get job = 2 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,181 | INFO     | . initial setup = 14 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,181 | INFO     | . payload setup = 121 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,181 | INFO     | . stage-in = 1 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,181 | INFO     | . payload execution = 23546 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,182 | INFO     | . stage-out = 5 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,182 | INFO     | . log creation = 1 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,182 | INFO     | ..............................
[2025-04-15 08:27:51] 2025-04-15 12:27:31,429 | INFO     | 
[2025-04-15 08:27:51] 2025-04-15 12:27:31,429 | INFO     | job summary report
[2025-04-15 08:27:51] 2025-04-15 12:27:31,432 | INFO     | --------------------------------------------------
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | PanDA job id: 6602375798
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | task id: 44075483
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | errors: (none)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | pilot state: finished 
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | transexitcode: 0
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | exeerrorcode: 0
[2025-04-15 08:27:51] 2025-04-15 12:27:31,433 | INFO     | exeerrordiag: 
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | exitcode: 0
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | exitmsg: OK
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | cpuconsumptiontime: 53744 s
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | nevents: 400
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | neventsw: 0
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | pid: 10578
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | pgrp: 10578
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | corecount: 10
[2025-04-15 08:27:51] 2025-04-15 12:27:31,434 | INFO     | event service: False
[2025-04-15 08:27:51] 2025-04-15 12:27:31,435 | INFO     | sizes: {0: 2416536, 1: 2417137, 2: 2417221, 3: 2417249, 4: 2417476, 6: 2417476, 17: 2417632, 29: 2417660, 41: 2417688, 52: 2417716, 63: 2417744, 74: 2418286, 23670
[2025-04-15 08:27:51] 2025-04-15 12:27:31,435 | INFO     | --------------------------------------------------
[2025-04-15 08:27:51] 2025-04-15 12:27:31,435 | INFO     | 
[2025-04-15 08:27:51] 2025-04-15 12:27:31,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-15 08:27:51] 2025-04-15 12:27:31,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 08:27:51] 2025-04-15 12:27:31,666 | INFO     | job 6602375798 has completed (purged errors)
[2025-04-15 08:27:51] 2025-04-15 12:27:31,666 | INFO     | overall cleanup function is called
[2025-04-15 08:27:51] 2025-04-15 12:27:32,721 | INFO     | --- collectZombieJob: --- 10, [10578]
[2025-04-15 08:27:51] 2025-04-15 12:27:32,722 | INFO     | zombie collector waiting for pid 10578
[2025-04-15 08:27:51] 2025-04-15 12:27:32,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 08:27:51] 2025-04-15 12:27:32,722 | INFO     | collected zombie processes
[2025-04-15 08:27:51] 2025-04-15 12:27:32,722 | INFO     | will attempt to kill all subprocesses of pid=10578
[2025-04-15 08:27:51] 2025-04-15 12:27:34,360 | INFO     | PID=31360 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-15 08:27:51] 2025-04-15 12:27:34,360 | INFO     | .. there are 13 such processes running
[2025-04-15 08:27:51] 2025-04-15 12:27:34,427 | INFO     | process IDs to be killed: [10578] (in reverse order)
[2025-04-15 08:27:51] 2025-04-15 12:27:35,523 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 08:27:51] 2025-04-15 12:27:35,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 08:27:51] 2025-04-15 12:27:35,537 | INFO     | did not find any defunct processes belonging to 10578
[2025-04-15 08:27:51] 2025-04-15 12:27:35,558 | INFO     | did not find any defunct processes belonging to 10578
[2025-04-15 08:27:51] 2025-04-15 12:27:35,558 | INFO     | ready for new job
[2025-04-15 08:27:51] 2025-04-15 12:27:35,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 08:27:51] 2025-04-15 12:27:35,564 | INFO     | **************************************
[2025-04-15 08:27:51] 2025-04-15 12:27:35,564 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 08:27:51] 2025-04-15 12:27:35,565 | INFO     | **************************************
[2025-04-15 08:27:51] 2025-04-15 12:27:35,565 | INFO     | 
[2025-04-15 08:27:51] 2025-04-15 12:27:35,570 | INFO     | architecture information:
[2025-04-15 08:27:51] 2025-04-15 12:27:35,578 | INFO     | executing command: cat /etc/os-release
[2025-04-15 08:27:51] 2025-04-15 12:27:35,700 | INFO     | cat /etc/os-release:
[2025-04-15 08:27:51] NAME="CentOS Linux"
[2025-04-15 08:27:51] VERSION="7 (Core)"
[2025-04-15 08:27:51] ID="centos"
[2025-04-15 08:27:51] ID_LIKE="rhel fedora"
[2025-04-15 08:27:51] VERSION_ID="7"
[2025-04-15 08:27:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 08:27:51] ANSI_COLOR="0;31"
[2025-04-15 08:27:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 08:27:51] HOME_URL="https://www.centos.org/"
[2025-04-15 08:27:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 08:27:51] 
[2025-04-15 08:27:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 08:27:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 08:27:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 08:27:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 08:27:51] 
[2025-04-15 08:27:51] 2025-04-15 12:27:35,701 | INFO     | **************************************
[2025-04-15 08:27:51] 2025-04-15 12:27:36,226 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-15 08:27:51] 2025-04-15 12:27:36,577 | INFO     | sufficient remaining disk space (56998494208 B)
[2025-04-15 08:27:51] 2025-04-15 12:27:36,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 08:27:51] 2025-04-15 12:27:36,591 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 08:27:51] 2025-04-15 12:27:36,592 | INFO     | update_server=False
[2025-04-15 08:27:51] 2025-04-15 12:27:36,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 08:27:51] 2025-04-15 12:27:36,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 08:27:51] 2025-04-15 12:27:36,595 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 08:27:51] 2025-04-15 12:27:36,595 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 08:27:51] 2025-04-15 12:27:36,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 08:27:51] 2025-04-15 12:27:36,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 08:27:51] 2025-04-15 12:27:36,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 08:27:51] 2025-04-15 12:27:36,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 08:27:51] 2025-04-15 12:27:36,933 | INFO     | all payload control threads have been joined
[2025-04-15 08:27:51] 2025-04-15 12:27:37,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 08:27:51] 2025-04-15 12:27:37,465 | INFO     | aborting loop
[2025-04-15 08:27:51] 2025-04-15 12:27:37,542 | INFO     | all data control threads have been joined
[2025-04-15 08:27:51] 2025-04-15 12:27:37,601 | INFO     | [job] retrieve thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:37,601 | INFO     | [job] queue monitor thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:37,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:37,964 | INFO     | [payload] control thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,029 | INFO     | [payload] validate_post thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,051 | INFO     | all job control threads have been joined
[2025-04-15 08:27:51] 2025-04-15 12:27:38,207 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,470 | INFO     | [job] job monitor thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,548 | INFO     | [data] control thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,695 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,704 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,713 | INFO     | [data] copytool_out thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,723 | INFO     | [data] copytool_in thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,726 | INFO     | [job] validate thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:38,767 | INFO     | [payload] failed_post thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:39,057 | INFO     | [job] control thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:40,603 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 08:27:51] 2025-04-15 12:27:42,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139666956748608)>', '<ExcThread(monitor, started 139666120484608)>']
[2025-04-15 08:27:51] 2025-04-15 12:27:42,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 08:27:51] 2025-04-15 12:27:42,631 | INFO     | [monitor] control thread has ended
[2025-04-15 08:27:51] 2025-04-15 12:27:47,487 | INFO     | all workflow threads have been joined
[2025-04-15 08:27:51] 2025-04-15 12:27:47,488 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 08:27:51] 2025-04-15 12:27:47,488 | INFO     | traces error code: 0
[2025-04-15 08:27:51] 2025-04-15 12:27:47,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 08:27:51] 2025-04-15 12:27:48,596 [wrapper] ==== pilot stdout END ====
[2025-04-15 08:27:51] 2025-04-15 12:27:48,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 08:27:51] 2025-04-15 12:27:48,638 [wrapper] pilotpid: 31360
[2025-04-15 08:27:51] 2025-04-15 12:27:48,660 [wrapper] Pilot exit status: 0
[2025-04-15 08:27:51] 2025-04-15 12:27:48,845 [wrapper] pandaids: 6602375798
[2025-04-15 08:27:51] 2025-04-15 12:27:49,122 [wrapper] cleanup supervisor_pilot 40333 31361
[2025-04-15 08:27:51] 2025-04-15 12:27:49,179 [wrapper] Test setup, not cleaning
[2025-04-15 08:27:51] 2025-04-15 12:27:49,236 [wrapper] apfmon messages muted
[2025-04-15 08:27:51] 2025-04-15 12:27:49,282 [wrapper] ==== wrapper stdout END ====
[2025-04-15 08:27:51] 2025-04-15 12:27:49,312 [wrapper] ==== wrapper stderr END ====
[2025-04-15 08:27:51]  *** Error codes and diagnostics ***
[2025-04-15 08:27:51]     "exeErrorCode": 0,
[2025-04-15 08:27:51]     "exeErrorDiag": "",
[2025-04-15 08:27:51]     "pilotErrorCode": 0,
[2025-04-15 08:27:51]     "pilotErrorDiag": "",
[2025-04-15 08:27:51]  *** Listing of results directory ***
[2025-04-15 08:27:51] total 418452
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 16:50 pilot3.tar.gz
[2025-04-15 08:27:51] -rwx------ 1 boincer umatlas     37140 Apr 14 16:51 runpilot2-wrapper.sh
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 16:51 queuedata.json
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas       100 Apr 15 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 08:27:51] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 01:45 run_atlas
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas       105 Apr 15 01:45 job.xml
[2025-04-15 08:27:51] -rw-r--r-- 2 boincer umatlas 226422995 Apr 15 01:46 EVNT.44075481._000813.pool.root.1
[2025-04-15 08:27:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 01:46 start_atlas.sh
[2025-04-15 08:27:51] drwxrwx--x 2 boincer umatlas      4096 Apr 15 01:46 shared
[2025-04-15 08:27:51] -rw-r--r-- 2 boincer umatlas    508882 Apr 15 01:46 input.tar.gz
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas         0 Apr 15 01:46 boinc_lockfile
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas      2578 Apr 15 01:46 pandaJob.out
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas       424 Apr 15 01:46 setup.sh.local
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas    983961 Apr 15 01:49 agis_schedconf.cvmfs.json
[2025-04-15 08:27:51] drwx------ 4 boincer umatlas      4096 Apr 15 01:49 pilot3
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas 193306213 Apr 15 08:21 HITS.44075483._020527.pool.root.1
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas      6144 Apr 15 08:22 init_data.xml
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas       531 Apr 15 08:22 boinc_task_state.xml
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas      1072 Apr 15 08:26 memory_monitor_summary.json
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas   1603529 Apr 15 08:26 agis_ddmendpoints.agis.ALL.json
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas    516591 Apr 15 08:26 log.44075483._020527.job.log.tgz.1
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas        95 Apr 15 08:26 pilot_heartbeat.json
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas      7762 Apr 15 08:27 heartbeat.json
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 08:27 boinc_mmap_file
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas        28 Apr 15 08:27 wrapper_checkpoint.txt
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas      4476 Apr 15 08:27 pilotlog.txt
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas   1946443 Apr 15 08:27 log.44075483._020527.job.log.1
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas       357 Apr 15 08:27 output.list
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas       620 Apr 15 08:27 runtime_log
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas   2478080 Apr 15 08:27 result.tar.gz
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas       663 Apr 15 08:27 YtzMDm1wfO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmIh0KDmn26RZm.diag
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas     11016 Apr 15 08:27 runtime_log.err
[2025-04-15 08:27:51] -rw-r--r-- 1 boincer umatlas     21568 Apr 15 08:27 stderr.txt
[2025-04-15 08:27:51] HITS file was successfully produced:
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas 193306213 Apr 15 08:21 shared/HITS.pool.root.1
[2025-04-15 08:27:51]  *** Contents of shared directory: ***
[2025-04-15 08:27:51] total 412840
[2025-04-15 08:27:51] -rw-r--r-- 2 boincer umatlas 226422995 Apr 15 01:46 ATLAS.root_0
[2025-04-15 08:27:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 01:46 start_atlas.sh
[2025-04-15 08:27:51] -rw-r--r-- 2 boincer umatlas    508882 Apr 15 01:46 input.tar.gz
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas 193306213 Apr 15 08:21 HITS.pool.root.1
[2025-04-15 08:27:51] -rw------- 1 boincer umatlas   2478080 Apr 15 08:27 result.tar.gz
08:27:53 (10758): run_atlas exited; CPU time 54224.663175
08:27:53 (10758): called boinc_finish(0)

</stderr_txt>
]]>

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