Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:39:46 (2378536): wrapper (7.7.26015): starting
09:39:46 (2378536): wrapper: running run_atlas (--nthreads 12)
[2025-04-15 09:39:46] Arguments: --nthreads 12
[2025-04-15 09:39:46] Threads: 12
[2025-04-15 09:39:46] Checking for CVMFS
[2025-04-15 09:39:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 09:39:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 09:39:47] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 09:39:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 09:39:48] 2.12.6.0 4038419 6062 117084 144880 0 235 3864679 4096000 17459 130560 0 47426831 99.982 1555382 483 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-15 09:39:48] CVMFS is ok
[2025-04-15 09:39:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 09:39:48] Checking for apptainer binary...
[2025-04-15 09:39:48] apptainer is not installed, using version from CVMFS
[2025-04-15 09:39:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 09:39:50] epyc7v12
[2025-04-15 09:39:50] apptainer works
[2025-04-15 09:39:50] Set ATHENA_PROC_NUMBER=12
[2025-04-15 09:39:50] Set ATHENA_CORE_NUMBER=12
[2025-04-15 09:39:50] Starting ATLAS job with PandaID=6600414879
[2025-04-15 09:39:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 11:43:01]  *** The last 200 lines of the pilot log: ***
[2025-04-15 11:43:01] 2025-04-15 11:42:43,628 | INFO     | sum of deviations: 63851393693.643456
[2025-04-15 11:43:01] 2025-04-15 11:42:43,628 | INFO     | mean x: 1744713823.0086956
[2025-04-15 11:43:01] 2025-04-15 11:42:43,628 | INFO     | mean y: 2474425.356521739
[2025-04-15 11:43:01] 2025-04-15 11:42:43,628 | INFO     | -- intersect: -236238453676.98694
[2025-04-15 11:43:01] 2025-04-15 11:42:43,628 | INFO     | intersect: -236238453676.98694
[2025-04-15 11:43:01] 2025-04-15 11:42:43,628 | INFO     | chi2: 5.905871253378499
[2025-04-15 11:43:01] 2025-04-15 11:42:43,629 | INFO     | sum of square deviations: 412687479.4909094
[2025-04-15 11:43:01] 2025-04-15 11:42:43,629 | INFO     | sum of deviations: 68952656076.3273
[2025-04-15 11:43:01] 2025-04-15 11:42:43,629 | INFO     | mean x: 1744713670.509091
[2025-04-15 11:43:01] 2025-04-15 11:42:43,629 | INFO     | mean y: 2486858.672727273
[2025-04-15 11:43:01] 2025-04-15 11:42:43,629 | INFO     | -- intersect: -291507790658.5544
[2025-04-15 11:43:01] 2025-04-15 11:42:43,630 | INFO     | intersect: -291507790658.5544
[2025-04-15 11:43:01] 2025-04-15 11:42:43,630 | INFO     | chi2: 5.013266837377239
[2025-04-15 11:43:01] 2025-04-15 11:42:43,630 | INFO     | current chi2=5.013266837377239 (change=15.113848197937577 %)
[2025-04-15 11:43:01] 2025-04-15 11:42:43,630 | INFO     | right removable region: 109
[2025-04-15 11:43:01] 2025-04-15 11:42:43,630 | INFO     | sum of square deviations: 412686869.4909094
[2025-04-15 11:43:01] 2025-04-15 11:42:43,635 | INFO     | sum of deviations: 32119888434.636337
[2025-04-15 11:43:01] 2025-04-15 11:42:43,635 | INFO     | mean x: 1744713975.509091
[2025-04-15 11:43:01] 2025-04-15 11:42:43,635 | INFO     | mean y: 2556244.8636363638
[2025-04-15 11:43:01] 2025-04-15 11:42:43,635 | INFO     | -- intersect: -135790516873.34294
[2025-04-15 11:43:01] 2025-04-15 11:42:43,635 | INFO     | intersect: -135790516873.34294
[2025-04-15 11:43:01] 2025-04-15 11:42:43,636 | INFO     | chi2: 2.980890783886736
[2025-04-15 11:43:01] 2025-04-15 11:42:43,636 | INFO     | current chi2=2.980890783886736 (change=49.5266548152147 %)
[2025-04-15 11:43:01] 2025-04-15 11:42:43,636 | INFO     | sum of square deviations: 358927416.9904774
[2025-04-15 11:43:01] 2025-04-15 11:42:43,637 | INFO     | sum of deviations: 10722511842.00953
[2025-04-15 11:43:01] 2025-04-15 11:42:43,637 | INFO     | mean x: 1744714128.0095239
[2025-04-15 11:43:01] 2025-04-15 11:42:43,637 | INFO     | mean y: 2616936.9904761906
[2025-04-15 11:43:01] 2025-04-15 11:42:43,637 | INFO     | -- intersect: -52118555793.0375
[2025-04-15 11:43:01] 2025-04-15 11:42:43,637 | INFO     | intersect: -52118555793.0375
[2025-04-15 11:43:01] 2025-04-15 11:42:43,637 | INFO     | chi2: 1.7707957311210407
[2025-04-15 11:43:01] 2025-04-15 11:42:43,637 | INFO     | current chi2=1.7707957311210407 (change=40.59508182275204 %)
[2025-04-15 11:43:01] 2025-04-15 11:42:43,638 | INFO     | sum of square deviations: 310051776.9899992
[2025-04-15 11:43:01] 2025-04-15 11:42:43,638 | INFO     | sum of deviations: -5119610639.280001
[2025-04-15 11:43:01] 2025-04-15 11:42:43,638 | INFO     | mean x: 1744714280.51
[2025-04-15 11:43:01] 2025-04-15 11:42:43,638 | INFO     | mean y: 2665976.28
[2025-04-15 11:43:01] 2025-04-15 11:42:43,647 | INFO     | -- intersect: 28811589052.669464
[2025-04-15 11:43:01] 2025-04-15 11:42:43,647 | INFO     | intersect: 28811589052.669464
[2025-04-15 11:43:01] 2025-04-15 11:42:43,647 | INFO     | chi2: 0.9768542960339246
[2025-04-15 11:43:01] 2025-04-15 11:42:43,647 | INFO     | current chi2=0.9768542960339246 (change=44.83529190487117 %)
[2025-04-15 11:43:01] 2025-04-15 11:42:43,647 | INFO     | sum of square deviations: 265827386.98947364
[2025-04-15 11:43:01] 2025-04-15 11:42:43,648 | INFO     | sum of deviations: -9466669333.126314
[2025-04-15 11:43:01] 2025-04-15 11:42:43,648 | INFO     | mean x: 1744714433.0105264
[2025-04-15 11:43:01] 2025-04-15 11:42:43,648 | INFO     | mean y: 2680877.1263157893
[2025-04-15 11:43:01] 2025-04-15 11:42:43,648 | INFO     | -- intersect: 62135611592.416565
[2025-04-15 11:43:01] 2025-04-15 11:42:43,648 | INFO     | intersect: 62135611592.416565
[2025-04-15 11:43:01] 2025-04-15 11:42:43,649 | INFO     | chi2: 0.9033299970546173
[2025-04-15 11:43:01] 2025-04-15 11:42:43,649 | INFO     | current chi2=0.9033299970546173 (change=7.526639262151943 %)
[2025-04-15 11:43:01] 2025-04-15 11:42:43,649 | INFO     | left removable region: 40
[2025-04-15 11:43:01] 2025-04-15 11:42:43,649 | INFO     | sum of square deviations: 101842062.9855073
[2025-04-15 11:43:01] 2025-04-15 11:42:43,649 | INFO     | sum of deviations: 448106617.6086957
[2025-04-15 11:43:01] 2025-04-15 11:42:43,650 | INFO     | mean x: 1744714860.0144928
[2025-04-15 11:43:01] 2025-04-15 11:42:43,650 | INFO     | mean y: 2695964.3913043477
[2025-04-15 11:43:01] 2025-04-15 11:42:43,650 | INFO     | -- intersect: -7674075810.390796
[2025-04-15 11:43:01] 2025-04-15 11:42:43,650 | INFO     | intersect: -7674075810.390796
[2025-04-15 11:43:01] 2025-04-15 11:42:43,650 | INFO     | chi2: 8.616259045185118e-05
[2025-04-15 11:43:01] 2025-04-15 11:42:43,650 | INFO     | -- intersect: -7674075810.390796
[2025-04-15 11:43:01] 2025-04-15 11:42:43,650 | INFO     | current memory leak: 4.40 B/s (using 69 data points, chi2=0.00)
[2025-04-15 11:43:01] 2025-04-15 11:42:43,651 | INFO     | ..............................
[2025-04-15 11:43:01] 2025-04-15 11:42:43,651 | INFO     | . Timing measurements:
[2025-04-15 11:43:01] 2025-04-15 11:42:43,651 | INFO     | . get job = 0 s
[2025-04-15 11:43:01] 2025-04-15 11:42:43,651 | INFO     | . initial setup = 5 s
[2025-04-15 11:43:01] 2025-04-15 11:42:43,651 | INFO     | . payload setup = 72 s
[2025-04-15 11:43:01] 2025-04-15 11:42:43,652 | INFO     | . stage-in = 0 s
[2025-04-15 11:43:01] 2025-04-15 11:42:43,652 | INFO     | . payload execution = 7003 s
[2025-04-15 11:43:01] 2025-04-15 11:42:43,652 | INFO     | . stage-out = 2 s
[2025-04-15 11:43:01] 2025-04-15 11:42:43,652 | INFO     | . log creation = 0 s
[2025-04-15 11:43:01] 2025-04-15 11:42:43,652 | INFO     | ..............................
[2025-04-15 11:43:01] 2025-04-15 11:42:44,171 | INFO     | 
[2025-04-15 11:43:01] 2025-04-15 11:42:44,171 | INFO     | job summary report
[2025-04-15 11:43:01] 2025-04-15 11:42:44,171 | INFO     | --------------------------------------------------
[2025-04-15 11:43:01] 2025-04-15 11:42:44,171 | INFO     | PanDA job id: 6600414879
[2025-04-15 11:43:01] 2025-04-15 11:42:44,171 | INFO     | task id: 44075164
[2025-04-15 11:43:01] 2025-04-15 11:42:44,171 | INFO     | errors: (none)
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | pilot state: finished 
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | transexitcode: 0
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | exeerrorcode: 0
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | exeerrordiag: 
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | exitcode: 0
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | exitmsg: OK
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | cpuconsumptiontime: 44428 s
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | nevents: 400
[2025-04-15 11:43:01] 2025-04-15 11:42:44,172 | INFO     | neventsw: 0
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | pid: 2396962
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | pgrp: 2396962
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | corecount: 12
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | event service: False
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | sizes: {0: 2416448, 1: 2417157, 2: 2417356, 13: 2417356, 23: 2417412, 34: 2417440, 45: 2417596, 56: 2417624, 67: 2417858, 78: 2417886, 7079: 2445383, 7083: 2454428
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | --------------------------------------------------
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | 
[2025-04-15 11:43:01] 2025-04-15 11:42:44,173 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/13
[2025-04-15 11:43:01] 2025-04-15 11:42:44,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,326 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 11:43:01] 2025-04-15 11:42:44,327 | INFO     | job 6600414879 has completed (purged errors)
[2025-04-15 11:43:01] 2025-04-15 11:42:44,327 | INFO     | overall cleanup function is called
[2025-04-15 11:43:01] 2025-04-15 11:42:45,343 | INFO     | --- collectZombieJob: --- 10, [2396962]
[2025-04-15 11:43:01] 2025-04-15 11:42:45,343 | INFO     | zombie collector waiting for pid 2396962
[2025-04-15 11:43:01] 2025-04-15 11:42:45,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 11:43:01] 2025-04-15 11:42:45,343 | INFO     | collected zombie processes
[2025-04-15 11:43:01] 2025-04-15 11:42:45,343 | INFO     | will attempt to kill all subprocesses of pid=2396962
[2025-04-15 11:43:01] 2025-04-15 11:42:46,514 | INFO     | process IDs to be killed: [2396962] (in reverse order)
[2025-04-15 11:43:01] 2025-04-15 11:42:48,983 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 11:43:01] 2025-04-15 11:42:48,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 11:43:01] 2025-04-15 11:42:49,030 | INFO     | did not find any defunct processes belonging to 2396962
[2025-04-15 11:43:01] 2025-04-15 11:42:49,069 | INFO     | did not find any defunct processes belonging to 2396962
[2025-04-15 11:43:01] 2025-04-15 11:42:49,069 | INFO     | ready for new job
[2025-04-15 11:43:01] 2025-04-15 11:42:49,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 11:43:01] 2025-04-15 11:42:49,080 | INFO     | **************************************
[2025-04-15 11:43:01] 2025-04-15 11:42:49,080 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 11:43:01] 2025-04-15 11:42:49,080 | INFO     | **************************************
[2025-04-15 11:43:01] 2025-04-15 11:42:49,080 | INFO     | 
[2025-04-15 11:43:01] 2025-04-15 11:42:49,121 | INFO     | architecture information:
[2025-04-15 11:43:01] 2025-04-15 11:42:49,135 | INFO     | executing command: cat /etc/os-release
[2025-04-15 11:43:01] 2025-04-15 11:42:49,259 | INFO     | cat /etc/os-release:
[2025-04-15 11:43:01] NAME="CentOS Linux"
[2025-04-15 11:43:01] VERSION="7 (Core)"
[2025-04-15 11:43:01] ID="centos"
[2025-04-15 11:43:01] ID_LIKE="rhel fedora"
[2025-04-15 11:43:01] VERSION_ID="7"
[2025-04-15 11:43:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 11:43:01] ANSI_COLOR="0;31"
[2025-04-15 11:43:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 11:43:01] HOME_URL="https://www.centos.org/"
[2025-04-15 11:43:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 11:43:01] 
[2025-04-15 11:43:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 11:43:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 11:43:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 11:43:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 11:43:01] 
[2025-04-15 11:43:01] 2025-04-15 11:42:49,260 | INFO     | **************************************
[2025-04-15 11:43:01] 2025-04-15 11:42:49,767 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/13
[2025-04-15 11:43:01] 2025-04-15 11:42:49,857 | INFO     | sufficient remaining disk space (318500765696 B)
[2025-04-15 11:43:01] 2025-04-15 11:42:49,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 11:43:01] 2025-04-15 11:42:49,858 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 11:43:01] 2025-04-15 11:42:49,858 | INFO     | update_server=False
[2025-04-15 11:43:01] 2025-04-15 11:42:49,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 11:43:01] 2025-04-15 11:42:49,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 11:43:01] 2025-04-15 11:42:49,859 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 11:43:01] 2025-04-15 11:42:49,859 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 11:43:01] 2025-04-15 11:42:49,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 11:43:01] 2025-04-15 11:42:49,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 11:43:01] 2025-04-15 11:42:49,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 11:43:01] 2025-04-15 11:42:49,860 | INFO     | aborting loop
[2025-04-15 11:43:01] 2025-04-15 11:42:50,235 | INFO     | all data control threads have been joined
[2025-04-15 11:43:01] 2025-04-15 11:42:50,327 | INFO     | all payload control threads have been joined
[2025-04-15 11:43:01] 2025-04-15 11:42:50,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 11:43:01] 2025-04-15 11:42:50,593 | INFO     | all job control threads have been joined
[2025-04-15 11:43:01] 2025-04-15 11:42:50,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 11:43:01] 2025-04-15 11:42:50,863 | INFO     | [job] retrieve thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:50,867 | INFO     | [job] queue monitor thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:50,867 | INFO     | [job] job monitor thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:50,907 | INFO     | [payload] failed_post thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:51,055 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:51,239 | INFO     | [data] control thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:51,331 | INFO     | [payload] control thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:51,515 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:51,599 | INFO     | [job] control thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:51,731 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:51,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:52,143 | INFO     | [job] validate thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:52,235 | INFO     | [payload] validate_post thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:52,251 | INFO     | [data] copytool_in thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:52,759 | INFO     | [data] copytool_out thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:54,439 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 11:43:01] 2025-04-15 11:42:54,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945889871680)>', '<ExcThread(monitor, started 139944790058752)>']
[2025-04-15 11:43:01] 2025-04-15 11:42:54,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 11:43:01] 2025-04-15 11:42:54,891 | INFO     | [monitor] control thread has ended
[2025-04-15 11:43:01] 2025-04-15 11:42:59,523 | INFO     | all workflow threads have been joined
[2025-04-15 11:43:01] 2025-04-15 11:42:59,523 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 11:43:01] 2025-04-15 11:42:59,523 | INFO     | traces error code: 0
[2025-04-15 11:43:01] 2025-04-15 11:42:59,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 11:43:01] 2025-04-15 11:42:59,955 [wrapper] ==== pilot stdout END ====
[2025-04-15 11:43:01] 2025-04-15 11:42:59,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 11:43:01] 2025-04-15 11:43:00,031 [wrapper] pilotpid: 2384994
[2025-04-15 11:43:01] 2025-04-15 11:43:00,075 [wrapper] Pilot exit status: 0
[2025-04-15 11:43:01] 2025-04-15 11:43:00,231 [wrapper] pandaids: 6600414879
[2025-04-15 11:43:01] 2025-04-15 11:43:00,468 [wrapper] cleanup supervisor_pilot 2909219 2384995
[2025-04-15 11:43:01] 2025-04-15 11:43:00,500 [wrapper] Test setup, not cleaning
[2025-04-15 11:43:01] 2025-04-15 11:43:00,547 [wrapper] apfmon messages muted
[2025-04-15 11:43:01] 2025-04-15 11:43:00,591 [wrapper] ==== wrapper stdout END ====
[2025-04-15 11:43:01] 2025-04-15 11:43:00,625 [wrapper] ==== wrapper stderr END ====
[2025-04-15 11:43:01]  *** Error codes and diagnostics ***
[2025-04-15 11:43:01]     "exeErrorCode": 0,
[2025-04-15 11:43:01]     "exeErrorDiag": "",
[2025-04-15 11:43:01]     "pilotErrorCode": 0,
[2025-04-15 11:43:01]     "pilotErrorDiag": "",
[2025-04-15 11:43:01]  *** Listing of results directory ***
[2025-04-15 11:43:01] total 412652
[2025-04-15 11:43:01] -rw-r--r-- 1 boinc boinc    495897 Apr 12 08:26 pilot3.tar.gz
[2025-04-15 11:43:01] -rwx------ 1 boinc boinc     37140 Apr 12 08:41 runpilot2-wrapper.sh
[2025-04-15 11:43:01] -rw-r--r-- 1 boinc boinc      5111 Apr 12 08:41 queuedata.json
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc       100 Apr 15 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 11:43:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 15 09:39 run_atlas
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc       105 Apr 15 09:39 job.xml
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc      6942 Apr 15 09:39 init_data.xml
[2025-04-15 11:43:01] -rw-r--r-- 2 boinc boinc 222205242 Apr 15 09:39 EVNT.44075162._001631.pool.root.1
[2025-04-15 11:43:01] -rw-r--r-- 2 boinc boinc     17569 Apr 15 09:39 start_atlas.sh
[2025-04-15 11:43:01] drwxrwx--x 2 boinc boinc      4096 Apr 15 09:39 shared
[2025-04-15 11:43:01] -rw-r--r-- 2 boinc boinc    508879 Apr 15 09:39 input.tar.gz
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc         0 Apr 15 09:39 boinc_lockfile
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc      2549 Apr 15 09:39 pandaJob.out
[2025-04-15 11:43:01] -rw------- 1 boinc boinc       424 Apr 15 09:39 setup.sh.local
[2025-04-15 11:43:01] -rw------- 1 boinc boinc    983969 Apr 15 09:41 agis_schedconf.cvmfs.json
[2025-04-15 11:43:01] -rw------- 1 boinc boinc   1603529 Apr 15 09:41 agis_ddmendpoints.agis.ALL.json
[2025-04-15 11:43:01] drwx------ 4 boinc boinc      4096 Apr 15 09:41 pilot3
[2025-04-15 11:43:01] -rw------- 1 boinc boinc 194432608 Apr 15 11:40 HITS.44075164._042065.pool.root.1
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc       530 Apr 15 11:40 boinc_task_state.xml
[2025-04-15 11:43:01] -rw------- 1 boinc boinc      1023 Apr 15 11:41 memory_monitor_summary.json
[2025-04-15 11:43:01] -rw------- 1 boinc boinc    375926 Apr 15 11:41 log.44075164._042065.job.log.tgz.1
[2025-04-15 11:43:01] -rw------- 1 boinc boinc        95 Apr 15 11:42 pilot_heartbeat.json
[2025-04-15 11:43:01] -rw------- 1 boinc boinc      7648 Apr 15 11:42 heartbeat.json
[2025-04-15 11:43:01] -rw------- 1 boinc boinc      4501 Apr 15 11:42 pilotlog.txt
[2025-04-15 11:43:01] -rw------- 1 boinc boinc    662695 Apr 15 11:43 log.44075164._042065.job.log.1
[2025-04-15 11:43:01] -rw------- 1 boinc boinc       357 Apr 15 11:43 output.list
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc      8192 Apr 15 11:43 boinc_mmap_file
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc       620 Apr 15 11:43 runtime_log
[2025-04-15 11:43:01] -rw------- 1 boinc boinc   1054720 Apr 15 11:43 result.tar.gz
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc        27 Apr 15 11:43 wrapper_checkpoint.txt
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc     11427 Apr 15 11:43 runtime_log.err
[2025-04-15 11:43:01] -rw------- 1 boinc boinc       651 Apr 15 11:43 5KZMDm2blN7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmMCyKDm7YLytn.diag
[2025-04-15 11:43:01] -rw-rw-r-- 1 boinc boinc     20652 Apr 15 11:43 stderr.txt
[2025-04-15 11:43:01] HITS file was successfully produced:
[2025-04-15 11:43:01] -rw------- 1 boinc boinc 194432608 Apr 15 11:40 shared/HITS.pool.root.1
[2025-04-15 11:43:01]  *** Contents of shared directory: ***
[2025-04-15 11:43:01] total 408436
[2025-04-15 11:43:01] -rw-r--r-- 2 boinc boinc 222205242 Apr 15 09:39 ATLAS.root_0
[2025-04-15 11:43:01] -rw-r--r-- 2 boinc boinc     17569 Apr 15 09:39 start_atlas.sh
[2025-04-15 11:43:01] -rw-r--r-- 2 boinc boinc    508879 Apr 15 09:39 input.tar.gz
[2025-04-15 11:43:01] -rw------- 1 boinc boinc 194432608 Apr 15 11:40 HITS.pool.root.1
[2025-04-15 11:43:01] -rw------- 1 boinc boinc   1054720 Apr 15 11:43 result.tar.gz
11:43:03 (2378536): run_atlas exited; CPU time 44828.838593
11:43:03 (2378536): called boinc_finish(0)

</stderr_txt>
]]>

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