Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:00:45 (509023): wrapper (7.7.26015): starting
02:00:45 (509023): wrapper: running run_atlas (--nthreads 10)
[2025-04-15 02:00:45] Arguments: --nthreads 10
[2025-04-15 02:00:45] Threads: 10
[2025-04-15 02:00:45] Checking for CVMFS
[2025-04-15 02:00:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 02:00:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 02:00:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 02:00:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 02:00:46] 2.12.6.0 1145515 129434 226664 144876 2 155 19383987 32935937 15284 130560 0 85557739 99.608 86929139 24021 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-15 02:00:46] CVMFS is ok
[2025-04-15 02:00:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 02:00:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 02:00:47] Further information can be found at the LHC@home message board.
[2025-04-15 02:00:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 02:00:47] Checking for apptainer binary...
[2025-04-15 02:00:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 02:00:47] Running /usr/bin/apptainer --version
[2025-04-15 02:00:47] apptainer version 1.4.0-1.el9
[2025-04-15 02:00:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 02:00:48] c-8-17.aglt2.org
[2025-04-15 02:00:48] apptainer works
[2025-04-15 02:00:48] Set ATHENA_PROC_NUMBER=10
[2025-04-15 02:00:48] Set ATHENA_CORE_NUMBER=10
[2025-04-15 02:00:48] Starting ATLAS job with PandaID=6603673327
[2025-04-15 02:00:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 09:07:57]  *** The last 200 lines of the pilot log: ***
[2025-04-15 09:07:58] 2025-04-15 13:07:17,882 | INFO     | monitor loop #1576: job 0:6603673327 is in state 'finished'
[2025-04-15 09:07:58] 2025-04-15 13:07:17,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 09:07:58] 2025-04-15 13:07:20,390 | INFO     | monitor loop #1577: job 0:6603673327 is in state 'finished'
[2025-04-15 09:07:58] 2025-04-15 13:07:20,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 09:07:58] 2025-04-15 13:07:22,902 | INFO     | monitor loop #1578: job 0:6603673327 is in state 'finished'
[2025-04-15 09:07:58] 2025-04-15 13:07:22,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-15 09:07:58] 2025-04-15 13:07:23,912 | INFO     | PID=513400 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-15 09:07:58] 2025-04-15 13:07:23,913 | INFO     | .. there are 41 such processes running
[2025-04-15 09:07:58] 2025-04-15 13:07:24,056 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-15 09:07:58] 2025-04-15 13:07:24,057 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603673327/memory_monitor_summary.json (trf name=prmon)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,058 | INFO     | extracted standard info from prmon json
[2025-04-15 09:07:58] 2025-04-15 13:07:24,058 | INFO     | extracted standard memory fields from prmon json
[2025-04-15 09:07:58] 2025-04-15 13:07:24,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-15 09:07:58] 2025-04-15 13:07:24,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-15 09:07:58] 2025-04-15 13:07:24,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-15 09:07:58] 2025-04-15 13:07:24,083 | INFO     | fitting pss+swap vs Time
[2025-04-15 09:07:58] 2025-04-15 13:07:24,084 | INFO     | sum of square deviations: 22484093701.731445
[2025-04-15 09:07:58] 2025-04-15 13:07:24,089 | INFO     | sum of deviations: 204750403606.74384
[2025-04-15 09:07:58] 2025-04-15 13:07:24,089 | INFO     | mean x: 1744709703.2781775
[2025-04-15 09:07:58] 2025-04-15 13:07:24,089 | INFO     | mean y: 2206539.8729016786
[2025-04-15 09:07:58] 2025-04-15 13:07:24,089 | INFO     | -- intersect: -15885915110.113804
[2025-04-15 09:07:58] 2025-04-15 13:07:24,089 | INFO     | intersect: -15885915110.113804
[2025-04-15 09:07:58] 2025-04-15 13:07:24,090 | INFO     | chi2: 6.552487986455548
[2025-04-15 09:07:58] 2025-04-15 13:07:24,091 | INFO     | sum of square deviations: 21684963322.900753
[2025-04-15 09:07:58] 2025-04-15 13:07:24,103 | INFO     | sum of deviations: 229719003213.11417
[2025-04-15 09:07:58] 2025-04-15 13:07:24,104 | INFO     | mean x: 1744709550.7791262
[2025-04-15 09:07:58] 2025-04-15 13:07:24,104 | INFO     | mean y: 2211257.594660194
[2025-04-15 09:07:58] 2025-04-15 13:07:24,104 | INFO     | -- intersect: -18480316608.99007
[2025-04-15 09:07:58] 2025-04-15 13:07:24,104 | INFO     | intersect: -18480316608.99007
[2025-04-15 09:07:58] 2025-04-15 13:07:24,105 | INFO     | chi2: 5.788668194184602
[2025-04-15 09:07:58] 2025-04-15 13:07:24,105 | INFO     | current chi2=5.788668194184602 (change=11.65694303980129 %)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,105 | INFO     | right removable region: 411
[2025-04-15 09:07:58] 2025-04-15 13:07:24,114 | INFO     | sum of square deviations: 21684917756.33978
[2025-04-15 09:07:58] 2025-04-15 13:07:24,118 | INFO     | sum of deviations: 108664923499.92233
[2025-04-15 09:07:58] 2025-04-15 13:07:24,119 | INFO     | mean x: 1744709855.7815535
[2025-04-15 09:07:58] 2025-04-15 13:07:24,119 | INFO     | mean y: 2224844.6213592235
[2025-04-15 09:07:58] 2025-04-15 13:07:24,119 | INFO     | -- intersect: -8740661115.95071
[2025-04-15 09:07:58] 2025-04-15 13:07:24,119 | INFO     | intersect: -8740661115.95071
[2025-04-15 09:07:58] 2025-04-15 13:07:24,120 | INFO     | chi2: 3.905645585825103
[2025-04-15 09:07:58] 2025-04-15 13:07:24,120 | INFO     | current chi2=3.905645585825103 (change=40.39446399751749 %)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,128 | INFO     | sum of square deviations: 20904904960.938583
[2025-04-15 09:07:58] 2025-04-15 13:07:24,132 | INFO     | sum of deviations: 48336683468.00983
[2025-04-15 09:07:58] 2025-04-15 13:07:24,133 | INFO     | mean x: 1744710008.2850122
[2025-04-15 09:07:58] 2025-04-15 13:07:24,133 | INFO     | mean y: 2236631.034398034
[2025-04-15 09:07:58] 2025-04-15 13:07:24,133 | INFO     | -- intersect: -4031912080.548888
[2025-04-15 09:07:58] 2025-04-15 13:07:24,133 | INFO     | intersect: -4031912080.548888
[2025-04-15 09:07:58] 2025-04-15 13:07:24,134 | INFO     | chi2: 2.9301530880456985
[2025-04-15 09:07:58] 2025-04-15 13:07:24,134 | INFO     | current chi2=2.9301530880456985 (change=24.976472553469613 %)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,134 | INFO     | left removable region: 20
[2025-04-15 09:07:58] 2025-04-15 13:07:24,135 | INFO     | sum of square deviations: 18534992373.176468
[2025-04-15 09:07:58] 2025-04-15 13:07:24,145 | INFO     | sum of deviations: -35307248368.882355
[2025-04-15 09:07:58] 2025-04-15 13:07:24,145 | INFO     | mean x: 1744710130.2941177
[2025-04-15 09:07:58] 2025-04-15 13:07:24,146 | INFO     | mean y: 2264908.094629156
[2025-04-15 09:07:58] 2025-04-15 13:07:24,146 | INFO     | -- intersect: 3325757718.97635
[2025-04-15 09:07:58] 2025-04-15 13:07:24,146 | INFO     | intersect: 3325757718.97635
[2025-04-15 09:07:58] 2025-04-15 13:07:24,146 | INFO     | chi2: 0.2877536259238821
[2025-04-15 09:07:58] 2025-04-15 13:07:24,147 | INFO     | -- intersect: 3325757718.97635
[2025-04-15 09:07:58] 2025-04-15 13:07:24,147 | INFO     | current memory leak: -1.90 B/s (using 391 data points, chi2=0.29)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | ..............................
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | . Timing measurements:
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | . get job = 0 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | . initial setup = 7 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | . payload setup = 29 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | . stage-in = 0 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | . payload execution = 25428 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,148 | INFO     | . stage-out = 3 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,149 | INFO     | . log creation = 0 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,149 | INFO     | ..............................
[2025-04-15 09:07:58] 2025-04-15 13:07:24,321 | INFO     | 
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | job summary report
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | --------------------------------------------------
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | PanDA job id: 6603673327
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | task id: 44075483
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | errors: (none)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | pilot state: finished 
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | transexitcode: 0
[2025-04-15 09:07:58] 2025-04-15 13:07:24,322 | INFO     | exeerrorcode: 0
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | exeerrordiag: 
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | exitcode: 0
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | exitmsg: OK
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | cpuconsumptiontime: 51072 s
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | nevents: 400
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | neventsw: 0
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | pid: 527796
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | pgrp: 527796
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | corecount: 10
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | event service: False
[2025-04-15 09:07:58] 2025-04-15 13:07:24,323 | INFO     | sizes: {0: 2416536, 1: 2417221, 2: 2417420, 13: 2417420, 23: 2417476, 27: 2417710, 34: 2417866, 25462: 2453430, 25463: 2453429, 25467: 2462426, 25468: 2462482, 254
[2025-04-15 09:07:58] 2025-04-15 13:07:24,324 | INFO     | --------------------------------------------------
[2025-04-15 09:07:58] 2025-04-15 13:07:24,324 | INFO     | 
[2025-04-15 09:07:58] 2025-04-15 13:07:24,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 09:07:58] 2025-04-15 13:07:24,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 09:07:58] 2025-04-15 13:07:24,358 | INFO     | job 6603673327 has completed (purged errors)
[2025-04-15 09:07:58] 2025-04-15 13:07:24,358 | INFO     | overall cleanup function is called
[2025-04-15 09:07:58] 2025-04-15 13:07:25,365 | INFO     | --- collectZombieJob: --- 10, [527796]
[2025-04-15 09:07:58] 2025-04-15 13:07:25,366 | INFO     | zombie collector waiting for pid 527796
[2025-04-15 09:07:58] 2025-04-15 13:07:25,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 09:07:58] 2025-04-15 13:07:25,366 | INFO     | collected zombie processes
[2025-04-15 09:07:58] 2025-04-15 13:07:25,366 | INFO     | will attempt to kill all subprocesses of pid=527796
[2025-04-15 09:07:58] 2025-04-15 13:07:26,037 | INFO     | process IDs to be killed: [527796] (in reverse order)
[2025-04-15 09:07:58] 2025-04-15 13:07:26,296 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 09:07:58] 2025-04-15 13:07:26,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 09:07:58] 2025-04-15 13:07:26,351 | INFO     | did not find any defunct processes belonging to 527796
[2025-04-15 09:07:58] 2025-04-15 13:07:26,393 | INFO     | did not find any defunct processes belonging to 527796
[2025-04-15 09:07:58] 2025-04-15 13:07:26,394 | INFO     | ready for new job
[2025-04-15 09:07:58] 2025-04-15 13:07:26,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 09:07:58] 2025-04-15 13:07:26,396 | INFO     | **************************************
[2025-04-15 09:07:58] 2025-04-15 13:07:26,396 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 09:07:58] 2025-04-15 13:07:26,396 | INFO     | **************************************
[2025-04-15 09:07:58] 2025-04-15 13:07:26,396 | INFO     | 
[2025-04-15 09:07:58] 2025-04-15 13:07:26,400 | INFO     | architecture information:
[2025-04-15 09:07:58] 2025-04-15 13:07:26,405 | INFO     | executing command: cat /etc/os-release
[2025-04-15 09:07:58] 2025-04-15 13:07:26,444 | INFO     | cat /etc/os-release:
[2025-04-15 09:07:58] NAME="CentOS Linux"
[2025-04-15 09:07:58] VERSION="7 (Core)"
[2025-04-15 09:07:58] ID="centos"
[2025-04-15 09:07:58] ID_LIKE="rhel fedora"
[2025-04-15 09:07:58] VERSION_ID="7"
[2025-04-15 09:07:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 09:07:58] ANSI_COLOR="0;31"
[2025-04-15 09:07:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 09:07:58] HOME_URL="https://www.centos.org/"
[2025-04-15 09:07:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 09:07:58] 
[2025-04-15 09:07:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 09:07:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 09:07:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 09:07:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 09:07:58] 
[2025-04-15 09:07:58] 2025-04-15 13:07:26,444 | INFO     | **************************************
[2025-04-15 09:07:58] 2025-04-15 13:07:26,952 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 09:07:58] 2025-04-15 13:07:27,019 | INFO     | sufficient remaining disk space (76001837056 B)
[2025-04-15 09:07:58] 2025-04-15 13:07:27,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 09:07:58] 2025-04-15 13:07:27,020 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 09:07:58] 2025-04-15 13:07:27,020 | INFO     | update_server=False
[2025-04-15 09:07:58] 2025-04-15 13:07:27,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 09:07:58] 2025-04-15 13:07:27,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 09:07:58] 2025-04-15 13:07:27,021 | INFO     | aborting loop
[2025-04-15 09:07:58] 2025-04-15 13:07:27,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 09:07:58] 2025-04-15 13:07:27,310 | INFO     | all data control threads have been joined
[2025-04-15 09:07:58] 2025-04-15 13:07:27,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 09:07:58] 2025-04-15 13:07:27,936 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 09:07:58] 2025-04-15 13:07:27,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 09:07:58] 2025-04-15 13:07:27,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 09:07:58] 2025-04-15 13:07:28,026 | INFO     | [job] job monitor thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:28,026 | INFO     | all payload control threads have been joined
[2025-04-15 09:07:58] 2025-04-15 13:07:28,026 | INFO     | [job] retrieve thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:28,263 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:28,327 | INFO     | [data] control thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:28,331 | INFO     | all job control threads have been joined
[2025-04-15 09:07:58] 2025-04-15 13:07:28,766 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:28,770 | INFO     | [job] validate thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:28,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:29,009 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:29,032 | INFO     | [payload] control thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:29,262 | INFO     | [payload] validate_post thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:29,329 | INFO     | [payload] failed_post thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:29,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 09:07:58] 2025-04-15 13:07:29,338 | INFO     | [job] control thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:29,365 | INFO     | [data] copytool_in thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:29,460 | INFO     | [data] copytool_out thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:30,337 | INFO     | [job] queue monitor thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:31,038 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 09:07:58] 2025-04-15 13:07:31,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710557173568)>', '<ExcThread(monitor, started 139709825140480)>']
[2025-04-15 09:07:58] 2025-04-15 13:07:31,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 09:07:58] 2025-04-15 13:07:31,960 | INFO     | [monitor] control thread has ended
[2025-04-15 09:07:58] 2025-04-15 13:07:36,425 | INFO     | all workflow threads have been joined
[2025-04-15 09:07:58] 2025-04-15 13:07:36,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 09:07:58] 2025-04-15 13:07:36,426 | INFO     | traces error code: 0
[2025-04-15 09:07:58] 2025-04-15 13:07:36,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 09:07:58] 2025-04-15 13:07:36,889 [wrapper] ==== pilot stdout END ====
[2025-04-15 09:07:58] 2025-04-15 13:07:36,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 09:07:58] 2025-04-15 13:07:36,905 [wrapper] pilotpid: 513400
[2025-04-15 09:07:58] 2025-04-15 13:07:36,908 [wrapper] Pilot exit status: 0
[2025-04-15 09:07:58] 2025-04-15 13:07:36,988 [wrapper] pandaids: 6603673327
[2025-04-15 09:07:58] 2025-04-15 13:07:37,203 [wrapper] cleanup supervisor_pilot 3305878 513401
[2025-04-15 09:07:58] 2025-04-15 13:07:37,257 [wrapper] Test setup, not cleaning
[2025-04-15 09:07:58] 2025-04-15 13:07:37,277 [wrapper] apfmon messages muted
[2025-04-15 09:07:58] 2025-04-15 13:07:37,301 [wrapper] ==== wrapper stdout END ====
[2025-04-15 09:07:58] 2025-04-15 13:07:37,319 [wrapper] ==== wrapper stderr END ====
[2025-04-15 09:07:58]  *** Error codes and diagnostics ***
[2025-04-15 09:07:58]     "exeErrorCode": 0,
[2025-04-15 09:07:58]     "exeErrorDiag": "",
[2025-04-15 09:07:58]     "pilotErrorCode": 0,
[2025-04-15 09:07:58]     "pilotErrorDiag": "",
[2025-04-15 09:07:58]  *** Listing of results directory ***
[2025-04-15 09:07:58] total 416560
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas    495897 Apr 14 21:16 pilot3.tar.gz
[2025-04-15 09:07:58] -rwx------. 1 boincer umatlas     37140 Apr 14 21:47 runpilot2-wrapper.sh
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas      5111 Apr 14 21:47 queuedata.json
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas       100 Apr 15 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 09:07:58] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 15 02:00 run_atlas
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas       105 Apr 15 02:00 job.xml
[2025-04-15 09:07:58] -rw-r--r--. 2 boincer umatlas 224053738 Apr 15 02:00 EVNT.44075481._000879.pool.root.1
[2025-04-15 09:07:58] drwxrwx--x. 2 boincer umatlas      4096 Apr 15 02:00 shared
[2025-04-15 09:07:58] -rw-r--r--. 2 boincer umatlas    508889 Apr 15 02:00 input.tar.gz
[2025-04-15 09:07:58] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 02:00 start_atlas.sh
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas         0 Apr 15 02:00 boinc_lockfile
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas      2578 Apr 15 02:00 pandaJob.out
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas       467 Apr 15 02:00 setup.sh.local
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas    983961 Apr 15 02:01 agis_schedconf.cvmfs.json
[2025-04-15 09:07:58] drwx------. 4 boincer umatlas      4096 Apr 15 02:01 pilot3
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas      6675 Apr 15 09:01 init_data.xml
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas 193450544 Apr 15 09:06 HITS.44075483._022618.pool.root.1
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas       531 Apr 15 09:06 boinc_task_state.xml
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas        95 Apr 15 09:06 pilot_heartbeat.json
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas      1067 Apr 15 09:06 memory_monitor_summary.json
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas   1603529 Apr 15 09:07 agis_ddmendpoints.agis.ALL.json
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas    522222 Apr 15 09:07 log.44075483._022618.job.log.tgz.1
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas      7742 Apr 15 09:07 heartbeat.json
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas      4353 Apr 15 09:07 pilotlog.txt
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas   2083836 Apr 15 09:07 log.44075483._022618.job.log.1
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas       357 Apr 15 09:07 output.list
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas       620 Apr 15 09:07 runtime_log
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas   2621440 Apr 15 09:07 result.tar.gz
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas       660 Apr 15 09:07 VhOMDmxZkO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmbv0KDmRPOzIn.diag
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas     11411 Apr 15 09:07 runtime_log.err
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas      8192 Apr 15 09:07 boinc_mmap_file
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas        28 Apr 15 09:07 wrapper_checkpoint.txt
[2025-04-15 09:07:58] -rw-r--r--. 1 boincer umatlas     21269 Apr 15 09:07 stderr.txt
[2025-04-15 09:07:58] HITS file was successfully produced:
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas 193450544 Apr 15 09:06 shared/HITS.pool.root.1
[2025-04-15 09:07:58]  *** Contents of shared directory: ***
[2025-04-15 09:07:58] total 410812
[2025-04-15 09:07:58] -rw-r--r--. 2 boincer umatlas 224053738 Apr 15 02:00 ATLAS.root_0
[2025-04-15 09:07:58] -rw-r--r--. 2 boincer umatlas    508889 Apr 15 02:00 input.tar.gz
[2025-04-15 09:07:58] -rw-r--r--. 2 boincer umatlas     17569 Apr 15 02:00 start_atlas.sh
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas 193450544 Apr 15 09:06 HITS.pool.root.1
[2025-04-15 09:07:58] -rw-------. 1 boincer umatlas   2621440 Apr 15 09:07 result.tar.gz
09:08:00 (509023): run_atlas exited; CPU time 52230.676059
09:08:00 (509023): called boinc_finish(0)

</stderr_txt>
]]>

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