Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-15 01:19:36 (289882): Detected: vboxwrapper 26206
2025-04-15 01:19:36 (289882): Detected: BOINC client v8.0.2
2025-04-15 01:19:36 (289882): Detected: VirtualBox VboxManage Interface (Version: 7.1.0)
2025-04-15 01:19:36 (289882): Successfully copied 'init_data.xml' to the shared directory.
2025-04-15 01:19:36 (289882): Create VM. (boinc_25e66a7b0b4010f6, slot#0)
2025-04-15 01:19:37 (289882): Setting Memory Size for VM. (4300MB)
2025-04-15 01:19:37 (289882): Setting CPU Count for VM. (3)
2025-04-15 01:19:37 (289882): Setting Chipset Options for VM.
2025-04-15 01:19:37 (289882): Setting Graphics Controller Options for VM.
2025-04-15 01:19:37 (289882): Setting Boot Options for VM.
2025-04-15 01:19:37 (289882): Setting Network Configuration for NAT.
2025-04-15 01:19:37 (289882): Enabling VM Network Access.
2025-04-15 01:19:37 (289882): Disabling USB Support for VM.
2025-04-15 01:19:38 (289882): Disabling COM Port Support for VM.
2025-04-15 01:19:38 (289882): Disabling LPT Port Support for VM.
2025-04-15 01:19:38 (289882): Disabling Audio Support for VM.
2025-04-15 01:19:38 (289882): Disabling Clipboard Support for VM.
2025-04-15 01:19:38 (289882): Disabling Drag and Drop Support for VM.
2025-04-15 01:19:38 (289882): Adding storage controller(s) to VM.
2025-04-15 01:19:38 (289882): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-15 01:19:40 (289882): Adding VirtualBox Guest Additions to VM.
2025-04-15 01:19:40 (289882): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-15 01:19:41 (289882): forwarding host port 36105 to guest port 80
2025-04-15 01:19:41 (289882): Enabling remote desktop for VM.
2025-04-15 01:19:41 (289882): Required extension pack not installed, remote desktop not enabled.
2025-04-15 01:19:41 (289882): Enabling shared directory for VM.
2025-04-15 01:19:41 (289882): Starting VM using VBoxManage interface. (boinc_25e66a7b0b4010f6, slot#0)
2025-04-15 01:19:43 (289882): Successfully started VM. (PID = '290471')
2025-04-15 01:19:43 (289882): Reporting VM Process ID to BOINC.
2025-04-15 01:19:43 (289882): Guest Log: BIOS: VirtualBox 7.1.0
2025-04-15 01:19:43 (289882): Guest Log: CPUID EDX: 0x178bfbff
2025-04-15 01:19:43 (289882): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-15 01:19:43 (289882): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-15 01:19:43 (289882): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-15 01:19:43 (289882): Detected: Web Application Enabled (http://localhost:36105)
2025-04-15 01:19:43 (289882): Preference change detected
2025-04-15 01:19:43 (289882): Setting CPU throttle for VM. (100%)
2025-04-15 01:19:43 (289882): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-15 01:19:45 (289882): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-15 01:19:45 (289882): Guest Log: BIOS: Booting from Hard Disk...
2025-04-15 01:19:48 (289882): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-15 01:19:48 (289882): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-15 01:19:48 (289882): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-15 01:20:08 (289882): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-15 01:20:08 (289882): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-15 01:20:34 (289882): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.000202 main     Log opened 2025-04-15T08:20:33.329439000Z
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.000339 main     OS Product: Linux
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.000380 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.000412 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.000443 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.000444 main     Process ID: 1291
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.000444 main     Package type: LINUX_64BITS_GENERIC
2025-04-15 01:20:34 (289882): Guest Log: 00:00:00.002797 main     5.2.32 r132073 started. Verbose level = 0
2025-04-15 01:20:35 (289882): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-15 01:20:35 (289882): Guest Log: [INFO] Mounting shared directory
2025-04-15 01:20:35 (289882): Guest Log: [INFO] Checking for init_data.xml
2025-04-15 01:20:42 (289882): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-15 01:20:42 (289882): Guest Log: [INFO] Detected branch: prod
2025-04-15 01:20:43 (289882): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-15 01:20:43 (289882): Guest Log: Copying input files
2025-04-15 01:20:44 (289882): Guest Log: Copied input files into RunAtlas.
2025-04-15 01:20:44 (289882): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-15 01:20:44 (289882): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-15 01:20:44 (289882): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-15 01:20:44 (289882): Guest Log: Further information can be found at the LHC@home message board.
2025-04-15 01:20:53 (289882): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-15 01:20:54 (289882): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-15 01:20:54 (289882): Guest Log: 2.6.3.0 1568 0 30196 144880 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-15 01:20:58 (289882): Guest Log: copied the webapp to /var/www
2025-04-15 01:20:58 (289882): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-15 01:20:58 (289882): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-15 01:20:59 (289882): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-15 01:20:59 (289882): Guest Log:  *** Starting ATLAS job. (PandaID=6603672511 taskID=44075483) ***
2025-04-15 02:58:44 (289882): Status Report: Elapsed Time: '6000.000000'
2025-04-15 02:58:44 (289882): Status Report: CPU Time: '14710.370000'
2025-04-15 04:37:46 (289882): Status Report: Elapsed Time: '12000.000000'
2025-04-15 04:37:46 (289882): Status Report: CPU Time: '32426.840000'
2025-04-15 05:31:45 (289882): Guest Log:  *** Job finished ***
2025-04-15 05:31:45 (289882): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:34,340 | INFO     | [data] copytool_out thread has finished
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:34,487 | INFO     | [payload] validate_post thread has finished
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:38,166 | INFO     | [data] queue_monitor thread has finished
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:38,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510940714816)>', '<ExcThread(monitor, started 140510484211456)>']
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:38,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:38,348 | INFO     | [monitor] control thread has ended
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,272 | INFO     | all workflow threads have been joined
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,272 | INFO     | end of generic workflow (traces error code: 0)
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,273 | INFO     | traces error code: 0
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,466 [wrapper] ==== pilot stdout END ====
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,477 [wrapper] ==== wrapper stdout RESUME ====
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,488 [wrapper] pilotpid: 5881
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,500 [wrapper] Pilot exit status: 0
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,596 [wrapper] pandaids: 6603672511
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,650 [wrapper] cleanup supervisor_pilot 15877 5882
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,659 [wrapper] Test setup, not cleaning
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,668 [wrapper] apfmon messages muted
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,676 [wrapper] ==== wrapper stdout END ====
2025-04-15 05:31:45 (289882): Guest Log: 2025-04-15 12:31:43,684 [wrapper] ==== wrapper stderr END ====
2025-04-15 05:31:45 (289882): Guest Log:  *** Error codes and diagnostics ***
2025-04-15 05:31:45 (289882): Guest Log:     "exeErrorCode": 0,
2025-04-15 05:31:45 (289882): Guest Log:     "exeErrorDiag": "",
2025-04-15 05:31:45 (289882): Guest Log:     "pilotErrorCode": 0,
2025-04-15 05:31:45 (289882): Guest Log:     "pilotErrorDiag": "",
2025-04-15 05:31:45 (289882): Guest Log:  *** Listing of results directory ***
2025-04-15 05:31:45 (289882): Guest Log: total 199280
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 15 00:23 pilot3.tar.gz
2025-04-15 05:31:45 (289882): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 15 00:38 runpilot2-wrapper.sh
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 15 00:38 queuedata.json
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas    508894 Apr 15 08:20 input.tar.gz
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 15 08:20 start_atlas.sh
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas      6473 Apr 15 08:20 init_data.xml
2025-04-15 05:31:45 (289882): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 15 08:20 EVNT.44075481._000854.pool.root.1 -> /data/./ATLAS.root_0
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 15 08:20 pandaJob.out
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas       424 Apr 15 08:21 setup.sh.local
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas    983969 Apr 15 08:22 agis_schedconf.cvmfs.json
2025-04-15 05:31:45 (289882): Guest Log: drwx------. 4 atlas atlas      4096 Apr 15 08:22 pilot3
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas 197173508 Apr 15 12:30 HITS.44075483._022002.pool.root.1
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 15 12:31 memory_monitor_summary.json
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 15 12:31 agis_ddmendpoints.agis.ALL.json
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas    325657 Apr 15 12:31 log.44075483._022002.job.log.tgz.1
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas        95 Apr 15 12:31 pilot_heartbeat.json
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas      7689 Apr 15 12:31 heartbeat.json
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 15 12:31 pilotlog.txt
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas   1230325 Apr 15 12:31 log.44075483._022002.job.log.1
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas       357 Apr 15 12:31 output.list
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 15 12:31 runtime_log
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas   1576960 Apr 15 12:31 result.tar.gz
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 atlas atlas     10929 Apr 15 12:31 runtime_log.err
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas       658 Apr 15 12:31 LZYMDmmUjO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdr0KDmqwE6qn.diag
2025-04-15 05:31:45 (289882): Guest Log: Looking for outputfile HITS.44075483._022002.pool.root.1
2025-04-15 05:31:45 (289882): Guest Log: HITS file was successfully produced
2025-04-15 05:31:45 (289882): Guest Log: -rw-------. 1 atlas atlas 197173508 Apr 15 12:30 /home/atlas/RunAtlas/HITS.44075483._022002.pool.root.1
2025-04-15 05:31:45 (289882): Guest Log: Successfully finished the ATLAS job!
2025-04-15 05:31:45 (289882): Guest Log: Copying the results back to the shared directory!
2025-04-15 05:31:45 (289882): Guest Log:  *** Contents of shared directory: ***
2025-04-15 05:31:45 (289882): Guest Log: total 220752
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 root root 223925759 Apr 15 08:19 ATLAS.root_0
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 root root      6473 Apr 15 08:19 init_data.xml
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 root root    508894 Apr 15 08:19 input.tar.gz
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 root root   1576960 Apr 15 12:31 result.tar.gz
2025-04-15 05:31:45 (289882): Guest Log: -rw-r--r--. 1 root root     17569 Apr 15 08:19 start_atlas.sh
2025-04-15 05:31:45 (289882): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-15 05:31:45 (289882): VM Completion File Detected.
2025-04-15 05:31:45 (289882): Powering off VM.
2025-04-15 05:31:48 (289882): Successfully stopped VM.
2025-04-15 05:31:48 (289882): Deregistering VM. (boinc_25e66a7b0b4010f6, slot#0)
2025-04-15 05:31:48 (289882): Removing network bandwidth throttle group from VM.
2025-04-15 05:31:48 (289882): Removing VM from VirtualBox.
05:31:54 (289882): called boinc_finish(0)

</stderr_txt>
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