Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:08:19 (48255): wrapper (7.7.26015): starting
00:08:19 (48255): wrapper: running run_atlas (--nthreads 10)
[2025-04-15 00:08:19] Arguments: --nthreads 10
[2025-04-15 00:08:19] Threads: 10
[2025-04-15 00:08:19] Checking for CVMFS
[2025-04-15 00:08:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-15 00:08:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-15 00:08:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-15 00:08:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-15 00:08:21] 2.11.2.0 4919 200292 369632 144874 3 60 14204883 18432001 9156 130560 0 33209036 99.430 47974976 42929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-15 00:08:21] CVMFS is ok
[2025-04-15 00:08:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 00:08:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 00:08:21] Further information can be found at the LHC@home message board.
[2025-04-15 00:08:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 00:08:21] Checking for apptainer binary...
[2025-04-15 00:08:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-15 00:08:21] Running /usr/bin/apptainer --version
[2025-04-15 00:08:22] apptainer version 1.3.2-1.el7
[2025-04-15 00:08:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 00:08:31] c-211-32.aglt2.org
[2025-04-15 00:08:31] apptainer works
[2025-04-15 00:08:32] Set ATHENA_PROC_NUMBER=10
[2025-04-15 00:08:32] Set ATHENA_CORE_NUMBER=10
[2025-04-15 00:08:32] Starting ATLAS job with PandaID=6603672483
[2025-04-15 00:08:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 15:26:17]  *** The last 200 lines of the pilot log: ***
[2025-04-15 15:26:17] 2025-04-15 19:25:59,595 | INFO     | mean y: 2538242.751393534
[2025-04-15 15:26:17] 2025-04-15 19:25:59,595 | INFO     | -- intersect: -6866285124.543697
[2025-04-15 15:26:17] 2025-04-15 19:25:59,595 | INFO     | intersect: -6866285124.543697
[2025-04-15 15:26:17] 2025-04-15 19:25:59,596 | INFO     | chi2: 8.62742867124613
[2025-04-15 15:26:17] 2025-04-15 19:25:59,598 | INFO     | sum of square deviations: 220074188373.62677
[2025-04-15 15:26:17] 2025-04-15 19:25:59,624 | INFO     | sum of deviations: 1003014539514.8252
[2025-04-15 15:26:17] 2025-04-15 19:25:59,624 | INFO     | mean x: 1744717574.5392377
[2025-04-15 15:26:17] 2025-04-15 19:25:59,625 | INFO     | mean y: 2543222.4764573993
[2025-04-15 15:26:17] 2025-04-15 19:25:59,625 | INFO     | -- intersect: -7949216625.156859
[2025-04-15 15:26:17] 2025-04-15 19:25:59,625 | INFO     | intersect: -7949216625.156859
[2025-04-15 15:26:17] 2025-04-15 19:25:59,626 | INFO     | chi2: 6.994542907255139
[2025-04-15 15:26:17] 2025-04-15 19:25:59,626 | INFO     | current chi2=6.994542907255139 (change=18.926679387488242 %)
[2025-04-15 15:26:17] 2025-04-15 19:25:59,627 | INFO     | right removable region: 891
[2025-04-15 15:26:17] 2025-04-15 19:25:59,628 | INFO     | sum of square deviations: 220073677009.54712
[2025-04-15 15:26:17] 2025-04-15 19:25:59,654 | INFO     | sum of deviations: 601285630615.0735
[2025-04-15 15:26:17] 2025-04-15 19:25:59,654 | INFO     | mean x: 1744717879.5403588
[2025-04-15 15:26:17] 2025-04-15 19:25:59,655 | INFO     | mean y: 2549701.456278027
[2025-04-15 15:26:17] 2025-04-15 19:25:59,655 | INFO     | -- intersect: -4764371107.520382
[2025-04-15 15:26:17] 2025-04-15 19:25:59,655 | INFO     | intersect: -4764371107.520382
[2025-04-15 15:26:17] 2025-04-15 19:25:59,656 | INFO     | chi2: 5.217144107674442
[2025-04-15 15:26:17] 2025-04-15 19:25:59,657 | INFO     | current chi2=5.217144107674442 (change=39.52840056432612 %)
[2025-04-15 15:26:17] 2025-04-15 19:25:59,658 | INFO     | sum of square deviations: 216393269149.10483
[2025-04-15 15:26:17] 2025-04-15 19:25:59,684 | INFO     | sum of deviations: 398357337665.9731
[2025-04-15 15:26:17] 2025-04-15 19:25:59,684 | INFO     | mean x: 1744718032.0462232
[2025-04-15 15:26:17] 2025-04-15 19:25:59,685 | INFO     | mean y: 2558109.1713641486
[2025-04-15 15:26:17] 2025-04-15 19:25:59,685 | INFO     | -- intersect: -3209284999.2427335
[2025-04-15 15:26:17] 2025-04-15 19:25:59,685 | INFO     | intersect: -3209284999.2427335
[2025-04-15 15:26:17] 2025-04-15 19:25:59,690 | INFO     | chi2: 3.514590350911046
[2025-04-15 15:26:17] 2025-04-15 19:25:59,690 | INFO     | current chi2=3.514590350911046 (change=32.63382650785766 %)
[2025-04-15 15:26:17] 2025-04-15 19:25:59,692 | INFO     | sum of square deviations: 212754117876.10077
[2025-04-15 15:26:17] 2025-04-15 19:25:59,789 | INFO     | sum of deviations: 209965934187.7038
[2025-04-15 15:26:17] 2025-04-15 19:25:59,790 | INFO     | mean x: 1744718184.5521543
[2025-04-15 15:26:17] 2025-04-15 19:25:59,790 | INFO     | mean y: 2566002.2346938774
[2025-04-15 15:26:17] 2025-04-15 19:25:59,790 | INFO     | -- intersect: -1719287314.499246
[2025-04-15 15:26:17] 2025-04-15 19:25:59,790 | INFO     | intersect: -1719287314.499246
[2025-04-15 15:26:17] 2025-04-15 19:25:59,791 | INFO     | chi2: 2.0417143313710593
[2025-04-15 15:26:17] 2025-04-15 19:25:59,796 | INFO     | current chi2=2.0417143313710593 (change=41.90747348857287 %)
[2025-04-15 15:26:17] 2025-04-15 19:25:59,797 | INFO     | sum of square deviations: 209155990628.03445
[2025-04-15 15:26:17] 2025-04-15 19:25:59,942 | INFO     | sum of deviations: 136677854813.67853
[2025-04-15 15:26:17] 2025-04-15 19:25:59,943 | INFO     | mean x: 1744718337.0581527
[2025-04-15 15:26:17] 2025-04-15 19:25:59,943 | INFO     | mean y: 2569105.65336374
[2025-04-15 15:26:17] 2025-04-15 19:25:59,943 | INFO     | -- intersect: -1137557738.656273
[2025-04-15 15:26:17] 2025-04-15 19:25:59,943 | INFO     | intersect: -1137557738.656273
[2025-04-15 15:26:17] 2025-04-15 19:25:59,948 | INFO     | chi2: 1.814444537089172
[2025-04-15 15:26:17] 2025-04-15 19:25:59,949 | INFO     | current chi2=1.814444537089172 (change=11.131321889153332 %)
[2025-04-15 15:26:17] 2025-04-15 19:25:59,949 | INFO     | left removable region: 40
[2025-04-15 15:26:17] 2025-04-15 19:25:59,950 | INFO     | sum of square deviations: 191099034615.72507
[2025-04-15 15:26:17] 2025-04-15 19:25:59,987 | INFO     | sum of deviations: 178504882017.6862
[2025-04-15 15:26:17] 2025-04-15 19:25:59,987 | INFO     | mean x: 1744718764.0787308
[2025-04-15 15:26:17] 2025-04-15 19:25:59,988 | INFO     | mean y: 2577890.1539365454
[2025-04-15 15:26:17] 2025-04-15 19:25:59,988 | INFO     | -- intersect: -1627157277.070657
[2025-04-15 15:26:17] 2025-04-15 19:25:59,988 | INFO     | intersect: -1627157277.070657
[2025-04-15 15:26:17] 2025-04-15 19:25:59,989 | INFO     | chi2: 0.009837096061904627
[2025-04-15 15:26:17] 2025-04-15 19:25:59,990 | INFO     | -- intersect: -1627157277.070657
[2025-04-15 15:26:17] 2025-04-15 19:25:59,990 | INFO     | current memory leak: 0.93 B/s (using 851 data points, chi2=0.01)
[2025-04-15 15:26:17] 2025-04-15 19:25:59,996 | INFO     | ..............................
[2025-04-15 15:26:17] 2025-04-15 19:25:59,996 | INFO     | . Timing measurements:
[2025-04-15 15:26:17] 2025-04-15 19:25:59,996 | INFO     | . get job = 0 s
[2025-04-15 15:26:17] 2025-04-15 19:25:59,996 | INFO     | . initial setup = 4 s
[2025-04-15 15:26:17] 2025-04-15 19:25:59,996 | INFO     | . payload setup = 59 s
[2025-04-15 15:26:17] 2025-04-15 19:25:59,997 | INFO     | . stage-in = 0 s
[2025-04-15 15:26:17] 2025-04-15 19:25:59,997 | INFO     | . payload execution = 54757 s
[2025-04-15 15:26:17] 2025-04-15 19:25:59,997 | INFO     | . stage-out = 5 s
[2025-04-15 15:26:17] 2025-04-15 19:25:59,997 | INFO     | . log creation = 1 s
[2025-04-15 15:26:17] 2025-04-15 19:25:59,997 | INFO     | ..............................
[2025-04-15 15:26:17] 2025-04-15 19:26:00,740 | INFO     | 
[2025-04-15 15:26:17] 2025-04-15 19:26:00,740 | INFO     | job summary report
[2025-04-15 15:26:17] 2025-04-15 19:26:00,740 | INFO     | --------------------------------------------------
[2025-04-15 15:26:17] 2025-04-15 19:26:00,740 | INFO     | PanDA job id: 6603672483
[2025-04-15 15:26:17] 2025-04-15 19:26:00,740 | INFO     | task id: 44075483
[2025-04-15 15:26:17] 2025-04-15 19:26:00,740 | INFO     | errors: (none)
[2025-04-15 15:26:17] 2025-04-15 19:26:00,741 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 15:26:17] 2025-04-15 19:26:00,741 | INFO     | pilot state: finished 
[2025-04-15 15:26:17] 2025-04-15 19:26:00,741 | INFO     | transexitcode: 0
[2025-04-15 15:26:17] 2025-04-15 19:26:00,741 | INFO     | exeerrorcode: 0
[2025-04-15 15:26:17] 2025-04-15 19:26:00,741 | INFO     | exeerrordiag: 
[2025-04-15 15:26:17] 2025-04-15 19:26:00,741 | INFO     | exitcode: 0
[2025-04-15 15:26:17] 2025-04-15 19:26:00,742 | INFO     | exitmsg: OK
[2025-04-15 15:26:17] 2025-04-15 19:26:00,742 | INFO     | cpuconsumptiontime: 87822 s
[2025-04-15 15:26:17] 2025-04-15 19:26:00,742 | INFO     | nevents: 400
[2025-04-15 15:26:17] 2025-04-15 19:26:00,742 | INFO     | neventsw: 0
[2025-04-15 15:26:17] 2025-04-15 19:26:00,742 | INFO     | pid: 13839
[2025-04-15 15:26:17] 2025-04-15 19:26:00,742 | INFO     | pgrp: 13839
[2025-04-15 15:26:17] 2025-04-15 19:26:00,743 | INFO     | corecount: 10
[2025-04-15 15:26:17] 2025-04-15 19:26:00,743 | INFO     | event service: False
[2025-04-15 15:26:17] 2025-04-15 19:26:00,743 | INFO     | sizes: {0: 2416536, 1: 2417221, 2: 2417420, 13: 2417420, 24: 2417476, 36: 2417504, 45: 2417866, 46: 2417894, 54823: 2465347, 54824: 2465346, 54831: 2474343, 54835:
[2025-04-15 15:26:17] 2025-04-15 19:26:00,743 | INFO     | --------------------------------------------------
[2025-04-15 15:26:17] 2025-04-15 19:26:00,743 | INFO     | 
[2025-04-15 15:26:17] 2025-04-15 19:26:00,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-15 15:26:17] 2025-04-15 19:26:01,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 15:26:17] 2025-04-15 19:26:01,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 15:26:17] 2025-04-15 19:26:01,038 | INFO     | job 6603672483 has completed (purged errors)
[2025-04-15 15:26:17] 2025-04-15 19:26:01,038 | INFO     | overall cleanup function is called
[2025-04-15 15:26:17] 2025-04-15 19:26:02,073 | INFO     | --- collectZombieJob: --- 10, [13839]
[2025-04-15 15:26:17] 2025-04-15 19:26:02,073 | INFO     | zombie collector waiting for pid 13839
[2025-04-15 15:26:17] 2025-04-15 19:26:02,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 15:26:17] 2025-04-15 19:26:02,073 | INFO     | collected zombie processes
[2025-04-15 15:26:17] 2025-04-15 19:26:02,074 | INFO     | will attempt to kill all subprocesses of pid=13839
[2025-04-15 15:26:17] 2025-04-15 19:26:02,788 | INFO     | process IDs to be killed: [13839] (in reverse order)
[2025-04-15 15:26:17] 2025-04-15 19:26:02,882 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 15:26:17] 2025-04-15 19:26:02,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 15:26:17] 2025-04-15 19:26:02,891 | INFO     | did not find any defunct processes belonging to 13839
[2025-04-15 15:26:17] 2025-04-15 19:26:02,900 | INFO     | did not find any defunct processes belonging to 13839
[2025-04-15 15:26:17] 2025-04-15 19:26:02,901 | INFO     | ready for new job
[2025-04-15 15:26:17] 2025-04-15 19:26:02,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 15:26:17] 2025-04-15 19:26:02,905 | INFO     | **************************************
[2025-04-15 15:26:17] 2025-04-15 19:26:02,905 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 15:26:17] 2025-04-15 19:26:02,906 | INFO     | **************************************
[2025-04-15 15:26:17] 2025-04-15 19:26:02,906 | INFO     | 
[2025-04-15 15:26:17] 2025-04-15 19:26:02,908 | INFO     | architecture information:
[2025-04-15 15:26:17] 2025-04-15 19:26:02,909 | INFO     | executing command: cat /etc/os-release
[2025-04-15 15:26:17] 2025-04-15 19:26:02,930 | INFO     | cat /etc/os-release:
[2025-04-15 15:26:17] NAME="CentOS Linux"
[2025-04-15 15:26:17] VERSION="7 (Core)"
[2025-04-15 15:26:17] ID="centos"
[2025-04-15 15:26:17] ID_LIKE="rhel fedora"
[2025-04-15 15:26:17] VERSION_ID="7"
[2025-04-15 15:26:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 15:26:17] ANSI_COLOR="0;31"
[2025-04-15 15:26:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 15:26:17] HOME_URL="https://www.centos.org/"
[2025-04-15 15:26:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 15:26:17] 
[2025-04-15 15:26:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 15:26:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 15:26:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 15:26:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 15:26:17] 
[2025-04-15 15:26:17] 2025-04-15 19:26:02,930 | INFO     | **************************************
[2025-04-15 15:26:17] 2025-04-15 19:26:03,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-15 15:26:17] 2025-04-15 19:26:03,858 | INFO     | sufficient remaining disk space (56957599744 B)
[2025-04-15 15:26:17] 2025-04-15 19:26:03,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 15:26:17] 2025-04-15 19:26:03,858 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 15:26:17] 2025-04-15 19:26:03,858 | INFO     | update_server=False
[2025-04-15 15:26:17] 2025-04-15 19:26:03,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 15:26:17] 2025-04-15 19:26:03,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 15:26:17] 2025-04-15 19:26:03,859 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-15 15:26:17] 2025-04-15 19:26:03,859 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 15:26:17] 2025-04-15 19:26:03,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 15:26:17] 2025-04-15 19:26:03,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 15:26:17] 2025-04-15 19:26:04,047 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-15 15:26:17] 2025-04-15 19:26:04,047 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-15 15:26:17] 2025-04-15 19:26:04,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:26:17] 2025-04-15 19:26:04,047 | INFO     | will abort loop
[2025-04-15 15:26:17] 2025-04-15 19:26:04,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 15:26:17] 2025-04-15 19:26:04,868 | INFO     | all data control threads have been joined
[2025-04-15 15:26:17] 2025-04-15 19:26:04,873 | INFO     | [job] retrieve thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:04,903 | INFO     | all job control threads have been joined
[2025-04-15 15:26:17] 2025-04-15 19:26:05,054 | INFO     | [job] job monitor thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,114 | INFO     | all payload control threads have been joined
[2025-04-15 15:26:17] 2025-04-15 19:26:05,204 | INFO     | [payload] validate_post thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,545 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,546 | INFO     | [job] validate thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,546 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,611 | INFO     | [data] copytool_in thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:26:17] 2025-04-15 19:26:05,866 | INFO     | [data] copytool_out thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,874 | INFO     | [data] control thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:05,909 | INFO     | [job] control thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:06,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:06,120 | INFO     | [payload] control thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:06,126 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:06,330 | INFO     | [payload] failed_post thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:06,761 | INFO     | [job] queue monitor thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:08,337 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 15:26:17] 2025-04-15 19:26:08,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394705553216)>', '<ExcThread(monitor, started 140394260051712)>']
[2025-04-15 15:26:17] 2025-04-15 19:26:09,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 15:26:17] 2025-04-15 19:26:09,922 | INFO     | [monitor] control thread has ended
[2025-04-15 15:26:17] 2025-04-15 19:26:13,978 | INFO     | all workflow threads have been joined
[2025-04-15 15:26:17] 2025-04-15 19:26:13,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 15:26:17] 2025-04-15 19:26:13,978 | INFO     | traces error code: 0
[2025-04-15 15:26:17] 2025-04-15 19:26:13,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 15:26:17] 2025-04-15 19:26:14,745 [wrapper] ==== pilot stdout END ====
[2025-04-15 15:26:17] 2025-04-15 19:26:14,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 15:26:17] 2025-04-15 19:26:14,838 [wrapper] pilotpid: 3607
[2025-04-15 15:26:17] 2025-04-15 19:26:14,880 [wrapper] Pilot exit status: 0
[2025-04-15 15:26:17] 2025-04-15 19:26:15,051 [wrapper] pandaids: 6603672483
[2025-04-15 15:26:17] 2025-04-15 19:26:15,669 [wrapper] cleanup supervisor_pilot 28166 3608
[2025-04-15 15:26:17] 2025-04-15 19:26:15,714 [wrapper] Test setup, not cleaning
[2025-04-15 15:26:17] 2025-04-15 19:26:15,756 [wrapper] apfmon messages muted
[2025-04-15 15:26:17] 2025-04-15 19:26:15,798 [wrapper] ==== wrapper stdout END ====
[2025-04-15 15:26:17] 2025-04-15 19:26:15,843 [wrapper] ==== wrapper stderr END ====
[2025-04-15 15:26:17]  *** Error codes and diagnostics ***
[2025-04-15 15:26:17]     "exeErrorCode": 0,
[2025-04-15 15:26:17]     "exeErrorDiag": "",
[2025-04-15 15:26:17]     "pilotErrorCode": 0,
[2025-04-15 15:26:17]     "pilotErrorDiag": "",
[2025-04-15 15:26:17]  *** Listing of results directory ***
[2025-04-15 15:26:17] total 422028
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 20:23 pilot3.tar.gz
[2025-04-15 15:26:17] -rwx------ 1 boincer umatlas     37140 Apr 14 20:35 runpilot2-wrapper.sh
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 20:35 queuedata.json
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas       100 Apr 15 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 15:26:17] -rwxr-xr-x 1 boincer umatlas      7986 Apr 15 00:08 run_atlas
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas       105 Apr 15 00:08 job.xml
[2025-04-15 15:26:17] -rw-r--r-- 2 boincer umatlas 226828815 Apr 15 00:08 EVNT.44075481._000853.pool.root.1
[2025-04-15 15:26:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 00:08 start_atlas.sh
[2025-04-15 15:26:17] drwxrwx--x 2 boincer umatlas      4096 Apr 15 00:08 shared
[2025-04-15 15:26:17] -rw-r--r-- 2 boincer umatlas    508895 Apr 15 00:08 input.tar.gz
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas         0 Apr 15 00:08 boinc_lockfile
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas      2578 Apr 15 00:08 pandaJob.out
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas       467 Apr 15 00:08 setup.sh.local
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas    983977 Apr 15 00:09 agis_schedconf.cvmfs.json
[2025-04-15 15:26:17] drwx------ 4 boincer umatlas      4096 Apr 15 00:09 pilot3
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas      6036 Apr 15 15:19 init_data.xml
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas 191698652 Apr 15 15:22 HITS.44075483._021974.pool.root.1
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas       531 Apr 15 15:23 boinc_task_state.xml
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas      1058 Apr 15 15:24 memory_monitor_summary.json
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas   1603529 Apr 15 15:24 agis_ddmendpoints.agis.ALL.json
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas    760657 Apr 15 15:24 log.44075483._021974.job.log.tgz.1
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas        95 Apr 15 15:25 pilot_heartbeat.json
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 15:25 boinc_mmap_file
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas        28 Apr 15 15:25 wrapper_checkpoint.txt
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas      7751 Apr 15 15:25 heartbeat.json
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas      4662 Apr 15 15:26 pilotlog.txt
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas   4132534 Apr 15 15:26 log.44075483._021974.job.log.1
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas       357 Apr 15 15:26 output.list
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas       620 Apr 15 15:26 runtime_log
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas   4915200 Apr 15 15:26 result.tar.gz
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas     11421 Apr 15 15:26 runtime_log.err
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas       665 Apr 15 15:26 jdjKDmmRjO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmTr0KDm6ZWROn.diag
[2025-04-15 15:26:17] -rw-r--r-- 1 boincer umatlas     20911 Apr 15 15:26 stderr.txt
[2025-04-15 15:26:17] HITS file was successfully produced:
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas 191698652 Apr 15 15:22 shared/HITS.pool.root.1
[2025-04-15 15:26:17]  *** Contents of shared directory: ***
[2025-04-15 15:26:17] total 414048
[2025-04-15 15:26:17] -rw-r--r-- 2 boincer umatlas 226828815 Apr 15 00:08 ATLAS.root_0
[2025-04-15 15:26:17] -rw-r--r-- 2 boincer umatlas     17569 Apr 15 00:08 start_atlas.sh
[2025-04-15 15:26:17] -rw-r--r-- 2 boincer umatlas    508895 Apr 15 00:08 input.tar.gz
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas 191698652 Apr 15 15:22 HITS.pool.root.1
[2025-04-15 15:26:17] -rw------- 1 boincer umatlas   4915200 Apr 15 15:26 result.tar.gz
15:26:18 (48255): run_atlas exited; CPU time 89166.176075
15:26:18 (48255): called boinc_finish(0)

</stderr_txt>
]]>

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