Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-15 13:31:36 (19776): Detected: vboxwrapper 26206
2025-04-15 13:31:36 (19776): Detected: BOINC client v8.0.2
2025-04-15 13:31:37 (19776): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-15 13:31:37 (19776): Successfully copied 'init_data.xml' to the shared directory.
2025-04-15 13:31:37 (19776): Create VM. (boinc_603fb13ce916b692, slot#8)
2025-04-15 13:31:38 (19776): Setting Memory Size for VM. (4800MB)
2025-04-15 13:31:38 (19776): Setting CPU Count for VM. (8)
2025-04-15 13:31:38 (19776): Setting Chipset Options for VM.
2025-04-15 13:31:39 (19776): Setting Graphics Controller Options for VM.
2025-04-15 13:31:39 (19776): Setting Boot Options for VM.
2025-04-15 13:31:39 (19776): Setting Network Configuration for NAT.
2025-04-15 13:31:39 (19776): Enabling VM Network Access.
2025-04-15 13:31:40 (19776): Disabling USB Support for VM.
2025-04-15 13:31:40 (19776): Disabling COM Port Support for VM.
2025-04-15 13:31:40 (19776): Disabling LPT Port Support for VM.
2025-04-15 13:31:40 (19776): Disabling Audio Support for VM.
2025-04-15 13:31:41 (19776): Disabling Clipboard Support for VM.
2025-04-15 13:31:41 (19776): Disabling Drag and Drop Support for VM.
2025-04-15 13:31:41 (19776): Adding storage controller(s) to VM.
2025-04-15 13:31:41 (19776): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-15 13:31:44 (19776): Adding VirtualBox Guest Additions to VM.
2025-04-15 13:31:44 (19776): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-15 13:31:45 (19776): forwarding host port 59161 to guest port 80
2025-04-15 13:31:45 (19776): Enabling remote desktop for VM.
2025-04-15 13:31:45 (19776): Enabling shared directory for VM.
2025-04-15 13:31:46 (19776): Starting VM using VBoxManage interface. (boinc_603fb13ce916b692, slot#8)
2025-04-15 13:31:52 (19776): Successfully started VM. (PID = '18320')
2025-04-15 13:31:52 (19776): Reporting VM Process ID to BOINC.
2025-04-15 13:31:52 (19776): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-15 13:31:52 (19776): Guest Log: CPUID EDX: 0x178bfbff
2025-04-15 13:31:52 (19776): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-15 13:31:52 (19776): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-15 13:31:52 (19776): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-15 13:31:52 (19776): Detected: Web Application Enabled (http://localhost:59161)
2025-04-15 13:31:52 (19776): Detected: Remote Desktop Enabled (localhost:59162)
2025-04-15 13:31:52 (19776): Preference change detected
2025-04-15 13:31:52 (19776): Setting CPU throttle for VM. (100%)
2025-04-15 13:31:52 (19776): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-15 13:31:54 (19776): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-15 13:31:54 (19776): Guest Log: BIOS: Booting from Hard Disk...
2025-04-15 13:31:57 (19776): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-15 13:31:57 (19776): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-15 13:31:57 (19776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-15 13:32:02 (19776): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-15 13:32:02 (19776): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-15 13:32:07 (19776): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.000141 main     Log opened 2025-04-15T13:32:06.367142000Z
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.000272 main     OS Product: Linux
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.000311 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.000348 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.000390 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.000391 main     Process ID: 1377
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.000392 main     Package type: LINUX_64BITS_GENERIC
2025-04-15 13:32:07 (19776): Guest Log: 00:00:00.002297 main     5.2.32 r132073 started. Verbose level = 0
2025-04-15 13:32:07 (19776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-15 13:32:07 (19776): Guest Log: [INFO] Mounting shared directory
2025-04-15 13:32:07 (19776): Guest Log: [INFO] Checking for init_data.xml
2025-04-15 13:32:17 (19776): Guest Log: 00:00:10.012802 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 403 470 000ns (GuestNow=1 744 716 736 967 660 000 ns GuestLast=1 744 723 926 371 130 000 ns fSetTimeLastLoop=true )
2025-04-15 13:35:06 (19776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-15 13:35:06 (19776): Guest Log: [INFO] Detected branch: prod
2025-04-15 13:35:06 (19776): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-15 13:35:06 (19776): Guest Log: Copying input files
2025-04-15 13:35:08 (19776): Guest Log: Copied input files into RunAtlas.
2025-04-15 13:35:08 (19776): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-15 13:35:08 (19776): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-15 13:35:08 (19776): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-15 13:35:08 (19776): Guest Log: Further information can be found at the LHC@home message board.
2025-04-15 13:37:52 (19776): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-15 13:37:52 (19776): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-15 13:37:52 (19776): Guest Log: 2.6.3.0 1708 4 30388 144885 4 1 3119946 4096000 0 65024 0 0 n/a 1171 20 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-15 13:37:53 (19776): Guest Log: copied the webapp to /var/www
2025-04-15 13:37:53 (19776): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-15 13:37:53 (19776): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-15 13:37:53 (19776): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-15 13:37:53 (19776): Guest Log:  *** Starting ATLAS job. (PandaID=6603671859 taskID=44075483) ***
2025-04-15 13:48:48 (19776): Guest Log:  *** Job finished ***
2025-04-15 13:48:48 (19776): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:39,581 | INFO     | [data] copytool_out thread has finished
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:39,602 | INFO     | [job] control thread has finished
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:41,273 | INFO     | [data] queue_monitor thread has finished
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:42,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940682069824)>', '<ExcThread(monitor, started 139940008544000)>']
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:43,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:43,209 | INFO     | [monitor] control thread has ended
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,721 | INFO     | all workflow threads have been joined
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,721 | INFO     | end of generic workflow (traces error code: 0)
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,721 | INFO     | traces error code: 0
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,793 [wrapper] ==== pilot stdout END ====
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,797 [wrapper] ==== wrapper stdout RESUME ====
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,801 [wrapper] pilotpid: 6161
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,804 [wrapper] Pilot exit status: 0
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,860 [wrapper] pandaids: 6603671859
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,889 [wrapper] cleanup supervisor_pilot  6167 6162
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,899 [wrapper] Test setup, not cleaning
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,903 [wrapper] apfmon messages muted
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,907 [wrapper] ==== wrapper stdout END ====
2025-04-15 13:48:48 (19776): Guest Log: 2025-04-15 11:48:47,911 [wrapper] ==== wrapper stderr END ====
2025-04-15 13:48:48 (19776): Guest Log:  *** Error codes and diagnostics ***
2025-04-15 13:48:48 (19776): Guest Log:     "exeErrorCode": 65,
2025-04-15 13:48:48 (19776): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-15 13:48:48 (19776): Guest Log:     "pilotErrorCode": 1305,
2025-04-15 13:48:48 (19776): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-15 13:48:48 (19776): Guest Log:  *** Listing of results directory ***
2025-04-15 13:48:48 (19776): Guest Log: total 3888
2025-04-15 13:48:48 (19776): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 14 23:52 pilot3.tar.gz
2025-04-15 13:48:48 (19776): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 14 23:54 queuedata.json
2025-04-15 13:48:48 (19776): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 14 23:55 runpilot2-wrapper.sh
2025-04-15 13:48:48 (19776): Guest Log: -rwxr-xr-x. 1 atlas atlas    9126 Apr 15 11:35 init_data.xml
2025-04-15 13:48:48 (19776): Guest Log: -rwxr-xr-x. 1 atlas atlas  508899 Apr 15 11:35 input.tar.gz
2025-04-15 13:48:48 (19776): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 15 11:35 start_atlas.sh
2025-04-15 13:48:48 (19776): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 15 11:35 EVNT.44075481._000840.pool.root.1 -> /data/./ATLAS.root_0
2025-04-15 13:48:48 (19776): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 15 11:37 pandaJob.out
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas     424 Apr 15 11:37 setup.sh.local
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas  983993 Apr 15 11:44 agis_schedconf.cvmfs.json
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas 1603529 Apr 15 11:44 agis_ddmendpoints.agis.ALL.json
2025-04-15 13:48:48 (19776): Guest Log: drwx------. 4 atlas atlas    4096 Apr 15 11:44 pilot3
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas    1004 Apr 15 11:46 memory_monitor_summary.json
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas   20801 Apr 15 11:46 log.44075483._021637.job.log.tgz.1
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas      95 Apr 15 11:48 pilot_heartbeat.json
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas    8368 Apr 15 11:48 heartbeat.json
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 15 11:48 pilotlog.txt
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas   80092 Apr 15 11:48 log.44075483._021637.job.log.1
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas     188 Apr 15 11:48 output.list
2025-04-15 13:48:48 (19776): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 15 11:48 runtime_log
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas  122880 Apr 15 11:48 result.tar.gz
2025-04-15 13:48:48 (19776): Guest Log: -rw-r--r--. 1 atlas atlas   10820 Apr 15 11:48 runtime_log.err
2025-04-15 13:48:48 (19776): Guest Log: -rw-------. 1 atlas atlas     655 Apr 15 11:48 ibHKDmWpiO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmj9WLDmHfUk5m.diag
2025-04-15 13:48:48 (19776): Guest Log: Looking for outputfile HITS.44075483._021637.pool.root.1
2025-04-15 13:48:48 (19776): Guest Log: No HITS file was produced
2025-04-15 13:48:48 (19776): Guest Log: Successfully finished the ATLAS job!
2025-04-15 13:48:48 (19776): Guest Log: Copying the results back to the shared directory!
2025-04-15 13:48:48 (19776): Guest Log:  *** Contents of shared directory: ***
2025-04-15 13:48:48 (19776): Guest Log: total 220980
2025-04-15 13:48:48 (19776): Guest Log: -rwxrwxrwx. 1 root root 225612383 Apr 15 11:31 ATLAS.root_0
2025-04-15 13:48:48 (19776): Guest Log: -rwxrwxrwx. 1 root root      9126 Apr 15 11:31 init_data.xml
2025-04-15 13:48:48 (19776): Guest Log: -rwxrwxrwx. 1 root root    508899 Apr 15 03:42 input.tar.gz
2025-04-15 13:48:48 (19776): Guest Log: -rwxrwxrwx. 1 root root    122880 Apr 15 11:48 result.tar.gz
2025-04-15 13:48:48 (19776): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 15 03:42 start_atlas.sh
2025-04-15 13:48:48 (19776): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-15 13:48:48 (19776): VM Completion File Detected.
2025-04-15 13:48:48 (19776): Powering off VM.
2025-04-15 13:48:49 (19776): Successfully stopped VM.
2025-04-15 13:48:49 (19776): Deregistering VM. (boinc_603fb13ce916b692, slot#8)
2025-04-15 13:48:49 (19776): Removing network bandwidth throttle group from VM.
2025-04-15 13:48:49 (19776): Removing VM from VirtualBox.
13:48:55 (19776): called boinc_finish(0)

</stderr_txt>
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