Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:34 (15657): wrapper (7.7.26015): starting
23:12:34 (15657): wrapper: running run_atlas (--nthreads 10)
[2025-04-14 23:12:34] Arguments: --nthreads 10
[2025-04-14 23:12:34] Threads: 10
[2025-04-14 23:12:34] Checking for CVMFS
[2025-04-14 23:12:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 23:12:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 23:12:35] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 23:12:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 23:12:35] 2.11.2.0 4584 8858 158236 144872 0 224 18087688 18432001 8358 130560 0 10399249 99.690 8271361 43006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-14 23:12:35] CVMFS is ok
[2025-04-14 23:12:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 23:12:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 23:12:35] Further information can be found at the LHC@home message board.
[2025-04-14 23:12:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 23:12:35] Checking for apptainer binary...
[2025-04-14 23:12:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 23:12:35] Running /usr/bin/apptainer --version
[2025-04-14 23:12:35] apptainer version 1.3.2-1.el7
[2025-04-14 23:12:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 23:12:41] c-211-26.aglt2.org
[2025-04-14 23:12:41] apptainer works
[2025-04-14 23:12:42] Set ATHENA_PROC_NUMBER=10
[2025-04-14 23:12:42] Set ATHENA_CORE_NUMBER=10
[2025-04-14 23:12:42] Starting ATLAS job with PandaID=6603671645
[2025-04-14 23:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 15:29:07]  *** The last 200 lines of the pilot log: ***
[2025-04-15 15:29:07] 2025-04-15 19:28:52,422 | INFO     | mean x: 1744716108.1107628
[2025-04-15 15:29:07] 2025-04-15 19:28:52,422 | INFO     | mean y: 2549822.1024033437
[2025-04-15 15:29:07] 2025-04-15 19:28:52,422 | INFO     | -- intersect: -4821180385.193653
[2025-04-15 15:29:07] 2025-04-15 19:28:52,423 | INFO     | intersect: -4821180385.193653
[2025-04-15 15:29:07] 2025-04-15 19:28:52,425 | INFO     | chi2: 6.9554588994646895
[2025-04-15 15:29:07] 2025-04-15 19:28:52,427 | INFO     | sum of square deviations: 267542661645.05765
[2025-04-15 15:29:07] 2025-04-15 19:28:52,460 | INFO     | sum of deviations: 816359862241.2344
[2025-04-15 15:29:07] 2025-04-15 19:28:52,460 | INFO     | mean x: 1744715955.6165967
[2025-04-15 15:29:07] 2025-04-15 19:28:52,460 | INFO     | mean y: 2552148.99789916
[2025-04-15 15:29:07] 2025-04-15 19:28:52,460 | INFO     | -- intersect: -5321144895.875094
[2025-04-15 15:29:07] 2025-04-15 19:28:52,460 | INFO     | intersect: -5321144895.875094
[2025-04-15 15:29:07] 2025-04-15 19:28:52,462 | INFO     | chi2: 6.095812673327979
[2025-04-15 15:29:07] 2025-04-15 19:28:52,462 | INFO     | current chi2=6.095812673327979 (change=12.359302794570052 %)
[2025-04-15 15:29:07] 2025-04-15 19:28:52,462 | INFO     | right removable region: 951
[2025-04-15 15:29:07] 2025-04-15 19:28:52,464 | INFO     | sum of square deviations: 267542013215.0572
[2025-04-15 15:29:07] 2025-04-15 19:28:52,490 | INFO     | sum of deviations: 466618655282.2349
[2025-04-15 15:29:07] 2025-04-15 19:28:52,491 | INFO     | mean x: 1744716260.6165967
[2025-04-15 15:29:07] 2025-04-15 19:28:52,491 | INFO     | mean y: 2560065.2636554623
[2025-04-15 15:29:07] 2025-04-15 19:28:52,491 | INFO     | -- intersect: -3040390630.9455314
[2025-04-15 15:29:07] 2025-04-15 19:28:52,491 | INFO     | intersect: -3040390630.9455314
[2025-04-15 15:29:07] 2025-04-15 19:28:52,493 | INFO     | chi2: 3.8393666951200762
[2025-04-15 15:29:07] 2025-04-15 19:28:52,493 | INFO     | current chi2=3.8393666951200762 (change=44.800670227300685 %)
[2025-04-15 15:29:07] 2025-04-15 19:28:52,495 | INFO     | sum of square deviations: 263348345253.7909
[2025-04-15 15:29:07] 2025-04-15 19:28:52,521 | INFO     | sum of deviations: 253231234760.82904
[2025-04-15 15:29:07] 2025-04-15 19:28:52,522 | INFO     | mean x: 1744716413.122492
[2025-04-15 15:29:07] 2025-04-15 19:28:52,522 | INFO     | mean y: 2567825.1911298838
[2025-04-15 15:29:07] 2025-04-15 19:28:52,522 | INFO     | -- intersect: -1675121439.1052191
[2025-04-15 15:29:07] 2025-04-15 19:28:52,522 | INFO     | intersect: -1675121439.1052191
[2025-04-15 15:29:07] 2025-04-15 19:28:52,524 | INFO     | chi2: 2.1877195849734896
[2025-04-15 15:29:07] 2025-04-15 19:28:52,524 | INFO     | current chi2=2.1877195849734896 (change=43.018738279046595 %)
[2025-04-15 15:29:07] 2025-04-15 19:28:52,525 | INFO     | sum of square deviations: 259198724629.95752
[2025-04-15 15:29:07] 2025-04-15 19:28:52,551 | INFO     | sum of deviations: 89396153832.67068
[2025-04-15 15:29:07] 2025-04-15 19:28:52,552 | INFO     | mean x: 1744716565.6284502
[2025-04-15 15:29:07] 2025-04-15 19:28:52,552 | INFO     | mean y: 2573841.370488323
[2025-04-15 15:29:07] 2025-04-15 19:28:52,552 | INFO     | -- intersect: -599168897.5955316
[2025-04-15 15:29:07] 2025-04-15 19:28:52,552 | INFO     | intersect: -599168897.5955316
[2025-04-15 15:29:07] 2025-04-15 19:28:52,554 | INFO     | chi2: 1.1323903977259533
[2025-04-15 15:29:07] 2025-04-15 19:28:52,554 | INFO     | current chi2=1.1323903977259533 (change=48.238777697843055 %)
[2025-04-15 15:29:07] 2025-04-15 19:28:52,555 | INFO     | sum of square deviations: 255092918781.05658
[2025-04-15 15:29:07] 2025-04-15 19:28:52,580 | INFO     | sum of deviations: 29121740780.508026
[2025-04-15 15:29:07] 2025-04-15 19:28:52,581 | INFO     | mean x: 1744716718.1344717
[2025-04-15 15:29:07] 2025-04-15 19:28:52,581 | INFO     | mean y: 2576078.773745998
[2025-04-15 15:29:07] 2025-04-15 19:28:52,581 | INFO     | -- intersect: -196603060.5129064
[2025-04-15 15:29:07] 2025-04-15 19:28:52,581 | INFO     | intersect: -196603060.5129064
[2025-04-15 15:29:07] 2025-04-15 19:28:52,583 | INFO     | chi2: 0.9966455790653115
[2025-04-15 15:29:07] 2025-04-15 19:28:52,583 | INFO     | current chi2=0.9966455790653115 (change=11.987457588234781 %)
[2025-04-15 15:29:07] 2025-04-15 19:28:52,583 | INFO     | left removable region: 40
[2025-04-15 15:29:07] 2025-04-15 19:28:52,585 | INFO     | sum of square deviations: 234441142198.60184
[2025-04-15 15:29:07] 2025-04-15 19:28:52,608 | INFO     | sum of deviations: 41706997885.58072
[2025-04-15 15:29:07] 2025-04-15 19:28:52,608 | INFO     | mean x: 1744717145.1602635
[2025-04-15 15:29:07] 2025-04-15 19:28:52,609 | INFO     | mean y: 2580642.413830955
[2025-04-15 15:29:07] 2025-04-15 19:28:52,609 | INFO     | -- intersect: -307803932.5874826
[2025-04-15 15:29:07] 2025-04-15 19:28:52,609 | INFO     | intersect: -307803932.5874826
[2025-04-15 15:29:07] 2025-04-15 19:28:52,610 | INFO     | chi2: 0.016294501318944343
[2025-04-15 15:29:07] 2025-04-15 19:28:52,610 | INFO     | -- intersect: -307803932.5874826
[2025-04-15 15:29:07] 2025-04-15 19:28:52,611 | INFO     | current memory leak: 0.18 B/s (using 911 data points, chi2=0.02)
[2025-04-15 15:29:07] 2025-04-15 19:28:52,612 | INFO     | ..............................
[2025-04-15 15:29:07] 2025-04-15 19:28:52,612 | INFO     | . Timing measurements:
[2025-04-15 15:29:07] 2025-04-15 19:28:52,612 | INFO     | . get job = 0 s
[2025-04-15 15:29:07] 2025-04-15 19:28:52,612 | INFO     | . initial setup = 3 s
[2025-04-15 15:29:07] 2025-04-15 19:28:52,613 | INFO     | . payload setup = 35 s
[2025-04-15 15:29:07] 2025-04-15 19:28:52,613 | INFO     | . stage-in = 0 s
[2025-04-15 15:29:07] 2025-04-15 19:28:52,613 | INFO     | . payload execution = 58397 s
[2025-04-15 15:29:07] 2025-04-15 19:28:52,613 | INFO     | . stage-out = 3 s
[2025-04-15 15:29:07] 2025-04-15 19:28:52,613 | INFO     | . log creation = 0 s
[2025-04-15 15:29:07] 2025-04-15 19:28:52,613 | INFO     | ..............................
[2025-04-15 15:29:07] 2025-04-15 19:28:53,247 | INFO     | 
[2025-04-15 15:29:07] 2025-04-15 19:28:53,248 | INFO     | job summary report
[2025-04-15 15:29:07] 2025-04-15 19:28:53,248 | INFO     | --------------------------------------------------
[2025-04-15 15:29:07] 2025-04-15 19:28:53,248 | INFO     | PanDA job id: 6603671645
[2025-04-15 15:29:07] 2025-04-15 19:28:53,248 | INFO     | task id: 44075483
[2025-04-15 15:29:07] 2025-04-15 19:28:53,248 | INFO     | errors: (none)
[2025-04-15 15:29:07] 2025-04-15 19:28:53,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-15 15:29:07] 2025-04-15 19:28:53,248 | INFO     | pilot state: finished 
[2025-04-15 15:29:07] 2025-04-15 19:28:53,249 | INFO     | transexitcode: 0
[2025-04-15 15:29:07] 2025-04-15 19:28:53,249 | INFO     | exeerrorcode: 0
[2025-04-15 15:29:07] 2025-04-15 19:28:53,252 | INFO     | exeerrordiag: 
[2025-04-15 15:29:07] 2025-04-15 19:28:53,252 | INFO     | exitcode: 0
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | exitmsg: OK
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | cpuconsumptiontime: 88421 s
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | nevents: 400
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | neventsw: 0
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | pid: 39823
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | pgrp: 39823
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | corecount: 10
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | event service: False
[2025-04-15 15:29:07] 2025-04-15 19:28:53,253 | INFO     | sizes: {0: 2416536, 1: 2417221, 2: 2417420, 13: 2417420, 24: 2417476, 25: 2417710, 35: 2417866, 58437: 2467227, 58438: 2467226, 58442: 2476223, 58443: 2476279, 584
[2025-04-15 15:29:07] 2025-04-15 19:28:53,254 | INFO     | --------------------------------------------------
[2025-04-15 15:29:07] 2025-04-15 19:28:53,254 | INFO     | 
[2025-04-15 15:29:07] 2025-04-15 19:28:53,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-15 15:29:07] 2025-04-15 19:28:53,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-15 15:29:07] 2025-04-15 19:28:53,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-15 15:29:07] 2025-04-15 19:28:53,279 | INFO     | job 6603671645 has completed (purged errors)
[2025-04-15 15:29:07] 2025-04-15 19:28:53,279 | INFO     | overall cleanup function is called
[2025-04-15 15:29:07] 2025-04-15 19:28:54,288 | INFO     | --- collectZombieJob: --- 10, [39823]
[2025-04-15 15:29:07] 2025-04-15 19:28:54,288 | INFO     | zombie collector waiting for pid 39823
[2025-04-15 15:29:07] 2025-04-15 19:28:54,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-15 15:29:07] 2025-04-15 19:28:54,289 | INFO     | collected zombie processes
[2025-04-15 15:29:07] 2025-04-15 19:28:54,289 | INFO     | will attempt to kill all subprocesses of pid=39823
[2025-04-15 15:29:07] 2025-04-15 19:28:54,718 | INFO     | process IDs to be killed: [39823] (in reverse order)
[2025-04-15 15:29:07] 2025-04-15 19:28:54,840 | WARNING  | found no corresponding commands to process id(s)
[2025-04-15 15:29:07] 2025-04-15 19:28:54,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-15 15:29:07] 2025-04-15 19:28:54,849 | INFO     | did not find any defunct processes belonging to 39823
[2025-04-15 15:29:07] 2025-04-15 19:28:54,858 | INFO     | did not find any defunct processes belonging to 39823
[2025-04-15 15:29:07] 2025-04-15 19:28:54,859 | INFO     | ready for new job
[2025-04-15 15:29:07] 2025-04-15 19:28:54,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-15 15:29:07] 2025-04-15 19:28:54,863 | INFO     | **************************************
[2025-04-15 15:29:07] 2025-04-15 19:28:54,864 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-15 15:29:07] 2025-04-15 19:28:54,864 | INFO     | **************************************
[2025-04-15 15:29:07] 2025-04-15 19:28:54,864 | INFO     | 
[2025-04-15 15:29:07] 2025-04-15 19:28:54,866 | INFO     | architecture information:
[2025-04-15 15:29:07] 2025-04-15 19:28:54,867 | INFO     | executing command: cat /etc/os-release
[2025-04-15 15:29:07] 2025-04-15 19:28:54,893 | INFO     | cat /etc/os-release:
[2025-04-15 15:29:07] NAME="CentOS Linux"
[2025-04-15 15:29:07] VERSION="7 (Core)"
[2025-04-15 15:29:07] ID="centos"
[2025-04-15 15:29:07] ID_LIKE="rhel fedora"
[2025-04-15 15:29:07] VERSION_ID="7"
[2025-04-15 15:29:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-15 15:29:07] ANSI_COLOR="0;31"
[2025-04-15 15:29:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-15 15:29:07] HOME_URL="https://www.centos.org/"
[2025-04-15 15:29:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-15 15:29:07] 
[2025-04-15 15:29:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-15 15:29:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-15 15:29:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-15 15:29:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-15 15:29:07] 
[2025-04-15 15:29:07] 2025-04-15 19:28:54,894 | INFO     | **************************************
[2025-04-15 15:29:07] 2025-04-15 19:28:55,396 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-15 15:29:07] 2025-04-15 19:28:55,423 | INFO     | sufficient remaining disk space (57023660032 B)
[2025-04-15 15:29:07] 2025-04-15 19:28:55,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-15 15:29:07] 2025-04-15 19:28:55,424 | INFO     | current server update state: UPDATING_FINAL
[2025-04-15 15:29:07] 2025-04-15 19:28:55,425 | INFO     | update_server=False
[2025-04-15 15:29:07] 2025-04-15 19:28:55,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-15 15:29:07] 2025-04-15 19:28:55,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-15 15:29:07] 2025-04-15 19:28:55,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:29:07] 2025-04-15 19:28:55,745 | INFO     | aborting loop
[2025-04-15 15:29:07] 2025-04-15 19:28:56,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-15 15:29:07] 2025-04-15 19:28:56,284 | INFO     | all payload control threads have been joined
[2025-04-15 15:29:07] 2025-04-15 19:28:56,286 | INFO     | all job control threads have been joined
[2025-04-15 15:29:07] 2025-04-15 19:28:56,397 | INFO     | all data control threads have been joined
[2025-04-15 15:29:07] 2025-04-15 19:28:56,431 | INFO     | [job] retrieve thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:56,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:56,560 | INFO     | PID=20951 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-15 15:29:07] 2025-04-15 19:28:56,560 | INFO     | .. there are 7 such processes running
[2025-04-15 15:29:07] 2025-04-15 19:28:56,560 | INFO     | found 0 job(s) in 20 queues
[2025-04-15 15:29:07] 2025-04-15 19:28:56,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-15 15:29:07] 2025-04-15 19:28:56,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-15 15:29:07] 2025-04-15 19:28:56,751 | INFO     | [job] job monitor thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:56,760 | INFO     | [data] copytool_in thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:56,998 | INFO     | [job] create_data_payload thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,035 | INFO     | [payload] validate_pre thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,094 | INFO     | [payload] validate_post thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,290 | INFO     | [payload] control thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,303 | INFO     | [job] control thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,399 | INFO     | [payload] execute_payloads thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,411 | INFO     | [data] control thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,441 | INFO     | [data] copytool_out thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,566 | INFO     | [payload] failed_post thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:57,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-15 15:29:07] 2025-04-15 19:28:57,876 | INFO     | [job] validate thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:28:58,831 | INFO     | [job] queue monitor thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:29:00,208 | INFO     | [data] queue_monitor thread has finished
[2025-04-15 15:29:07] 2025-04-15 19:29:01,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329777989440)>', '<ExcThread(monitor, started 140329483212544)>']
[2025-04-15 15:29:07] 2025-04-15 19:29:01,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-15 15:29:07] 2025-04-15 19:29:01,601 | INFO     | [monitor] control thread has ended
[2025-04-15 15:29:07] 2025-04-15 19:29:06,112 | INFO     | all workflow threads have been joined
[2025-04-15 15:29:07] 2025-04-15 19:29:06,112 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-15 15:29:07] 2025-04-15 19:29:06,113 | INFO     | traces error code: 0
[2025-04-15 15:29:07] 2025-04-15 19:29:06,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-15 15:29:07] 2025-04-15 19:29:06,433 [wrapper] ==== pilot stdout END ====
[2025-04-15 15:29:07] 2025-04-15 19:29:06,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-15 15:29:07] 2025-04-15 19:29:06,442 [wrapper] pilotpid: 20951
[2025-04-15 15:29:07] 2025-04-15 19:29:06,446 [wrapper] Pilot exit status: 0
[2025-04-15 15:29:07] 2025-04-15 19:29:06,508 [wrapper] pandaids: 6603671645
[2025-04-15 15:29:07] 2025-04-15 19:29:06,567 [wrapper] cleanup supervisor_pilot 14821 20952
[2025-04-15 15:29:07] 2025-04-15 19:29:06,571 [wrapper] Test setup, not cleaning
[2025-04-15 15:29:07] 2025-04-15 19:29:06,575 [wrapper] apfmon messages muted
[2025-04-15 15:29:07] 2025-04-15 19:29:06,579 [wrapper] ==== wrapper stdout END ====
[2025-04-15 15:29:07] 2025-04-15 19:29:06,582 [wrapper] ==== wrapper stderr END ====
[2025-04-15 15:29:07]  *** Error codes and diagnostics ***
[2025-04-15 15:29:07]     "exeErrorCode": 0,
[2025-04-15 15:29:07]     "exeErrorDiag": "",
[2025-04-15 15:29:07]     "pilotErrorCode": 0,
[2025-04-15 15:29:07]     "pilotErrorDiag": "",
[2025-04-15 15:29:07]  *** Listing of results directory ***
[2025-04-15 15:29:07] total 425296
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas    495897 Apr 14 19:13 pilot3.tar.gz
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas      5111 Apr 14 19:36 queuedata.json
[2025-04-15 15:29:07] -rwx------ 1 boincer umatlas     37140 Apr 14 19:38 runpilot2-wrapper.sh
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas       100 Apr 14 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-15 15:29:07] -rwxr-xr-x 1 boincer umatlas      7986 Apr 14 23:12 run_atlas
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas       105 Apr 14 23:12 job.xml
[2025-04-15 15:29:07] -rw-r--r-- 2 boincer umatlas 224556445 Apr 14 23:12 EVNT.44075481._000834.pool.root.1
[2025-04-15 15:29:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 23:12 start_atlas.sh
[2025-04-15 15:29:07] drwxrwx--x 2 boincer umatlas      4096 Apr 14 23:12 shared
[2025-04-15 15:29:07] -rw-r--r-- 2 boincer umatlas    508892 Apr 14 23:12 input.tar.gz
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas         0 Apr 14 23:12 boinc_lockfile
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas      2578 Apr 14 23:12 pandaJob.out
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas       467 Apr 14 23:12 setup.sh.local
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas    983977 Apr 14 23:13 agis_schedconf.cvmfs.json
[2025-04-15 15:29:07] drwx------ 4 boincer umatlas      4096 Apr 14 23:13 pilot3
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas      6035 Apr 15 15:18 init_data.xml
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas 196735752 Apr 15 15:27 HITS.44075483._021503.pool.root.1
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas       531 Apr 15 15:27 boinc_task_state.xml
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas      1062 Apr 15 15:28 memory_monitor_summary.json
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas        95 Apr 15 15:28 pilot_heartbeat.json
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas   1603529 Apr 15 15:28 agis_ddmendpoints.agis.ALL.json
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas    801120 Apr 15 15:28 log.44075483._021503.job.log.tgz.1
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas      7750 Apr 15 15:28 heartbeat.json
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas      8192 Apr 15 15:29 boinc_mmap_file
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas        28 Apr 15 15:29 wrapper_checkpoint.txt
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas      4745 Apr 15 15:29 pilotlog.txt
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas   4383137 Apr 15 15:29 log.44075483._021503.job.log.1
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas       357 Apr 15 15:29 output.list
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas       620 Apr 15 15:29 runtime_log
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas   5201920 Apr 15 15:29 result.tar.gz
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas     11421 Apr 15 15:29 runtime_log.err
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas       665 Apr 15 15:29 NE9KDmmYiO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmwo0KDmqbShqm.diag
[2025-04-15 15:29:07] -rw-r--r-- 1 boincer umatlas     20951 Apr 15 15:29 stderr.txt
[2025-04-15 15:29:07] HITS file was successfully produced:
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas 196735752 Apr 15 15:27 shared/HITS.pool.root.1
[2025-04-15 15:29:07]  *** Contents of shared directory: ***
[2025-04-15 15:29:07] total 417028
[2025-04-15 15:29:07] -rw-r--r-- 2 boincer umatlas 224556445 Apr 14 23:12 ATLAS.root_0
[2025-04-15 15:29:07] -rw-r--r-- 2 boincer umatlas     17569 Apr 14 23:12 start_atlas.sh
[2025-04-15 15:29:07] -rw-r--r-- 2 boincer umatlas    508892 Apr 14 23:12 input.tar.gz
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas 196735752 Apr 15 15:27 HITS.pool.root.1
[2025-04-15 15:29:07] -rw------- 1 boincer umatlas   5201920 Apr 15 15:29 result.tar.gz
15:29:09 (15657): run_atlas exited; CPU time 89854.361283
15:29:09 (15657): called boinc_finish(0)

</stderr_txt>
]]>

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