| Name | mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n_0 |
| Workunit | 231626471 |
| Created | 14 Apr 2025, 23:35:33 UTC |
| Sent | 15 Apr 2025, 3:18:45 UTC |
| Report deadline | 23 Apr 2025, 3:18:45 UTC |
| Received | 16 Apr 2025, 1:10:55 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10855964 |
| Run time | 2 hours 36 min 3 sec |
| CPU time | 11 hours 54 min 34 sec |
| Validate state | Valid |
| Credit | 582.29 |
| Device peak FLOPS | 18.00 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.47 GB |
| Peak swap size | 38.81 GB |
| Peak disk usage | 823.03 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:13:20 (2668188): wrapper (7.7.26015): starting
11:13:20 (2668188): wrapper: running run_atlas (--nthreads 4)
[2025-04-15 11:13:20] Arguments: --nthreads 4
[2025-04-15 11:13:20] Threads: 4
[2025-04-15 11:13:20] Checking for CVMFS
[2025-04-15 11:13:20] No cvmfs_config command found, will try listing directly
[2025-04-15 11:13:20] CVMFS is ok
[2025-04-15 11:13:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 11:13:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 11:13:20] Further information can be found at the LHC@home message board.
[2025-04-15 11:13:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 11:13:20] Checking for apptainer binary...
[2025-04-15 11:13:20] which: no apptainer in ((null))
[2025-04-15 11:13:20] apptainer is not installed, using version from CVMFS
[2025-04-15 11:13:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 11:13:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-04-15 11:13:20] apptainer works
[2025-04-15 11:13:20] Set ATHENA_PROC_NUMBER=4
[2025-04-15 11:13:20] Set ATHENA_CORE_NUMBER=4
[2025-04-15 11:13:20] Starting ATLAS job with PandaID=6603671610
[2025-04-15 11:13:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:14:50 (206694): wrapper (7.7.26015): starting
18:14:50 (206694): wrapper: running run_atlas (--nthreads 4)
[2025-04-15 18:14:50] Arguments: --nthreads 4
[2025-04-15 18:14:50] Threads: 4
[2025-04-15 18:14:50] This job has been restarted, cleaning up previous attempt
[2025-04-15 18:14:50] Checking for CVMFS
[2025-04-15 18:14:50] No cvmfs_config command found, will try listing directly
[2025-04-15 18:14:50] CVMFS is ok
[2025-04-15 18:14:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 18:14:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 18:14:50] Further information can be found at the LHC@home message board.
[2025-04-15 18:14:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 18:14:50] Checking for apptainer binary...
[2025-04-15 18:14:50] which: no apptainer in ((null))
[2025-04-15 18:14:50] apptainer is not installed, using version from CVMFS
[2025-04-15 18:14:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 18:14:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-04-15 18:14:51] apptainer works
[2025-04-15 18:14:51] Set ATHENA_PROC_NUMBER=4
[2025-04-15 18:14:51] Set ATHENA_CORE_NUMBER=4
[2025-04-15 18:14:51] Starting ATLAS job with PandaID=6603671610
[2025-04-15 18:14:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 18:18:33] Job failed
[2025-04-15 18:18:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-04-15 18:18:33] ++ pwd
[2025-04-15 18:18:33] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 18:18:33] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 18:18:33] + mv ATLAS.root_0 EVNT.44075481._000833.pool.root.1
[2025-04-15 18:18:33] mv: 'ATLAS.root_0' and 'EVNT.44075481._000833.pool.root.1' are the same file
[2025-04-15 18:18:33] + tar --strip-components=5 -xvf input.tar.gz
[2025-04-15 18:18:33] + umask 077
[2025-04-15 18:18:33] ++ date +%s
[2025-04-15 18:18:33] + ACCOUNTING_STARTTIME=1744733691
[2025-04-15 18:18:33] + echo 'Detecting resource accounting method available for the job.'
[2025-04-15 18:18:33] Detecting resource accounting method available for the job.
[2025-04-15 18:18:33] + JOB_ACCOUNTING=
[2025-04-15 18:18:33] + command -v arc-job-cgroup
[2025-04-15 18:18:33] + '[' -z '' ']'
[2025-04-15 18:18:33] + GNU_TIME=/usr/bin/time
[2025-04-15 18:18:33] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-04-15 18:18:33] Looking for /usr/bin/time tool for accounting measurements
[2025-04-15 18:18:33] + '[' '!' -z /usr/bin/time ']'
[2025-04-15 18:18:33] + /usr/bin/time --version
[2025-04-15 18:18:33] + echo 'GNU time found and will be used for job accounting.'
[2025-04-15 18:18:33] GNU time found and will be used for job accounting.
[2025-04-15 18:18:33] + JOB_ACCOUNTING=gnutime
[2025-04-15 18:18:33] + '[' -z gnutime ']'
[2025-04-15 18:18:33] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-04-15 18:18:33] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-04-15 18:18:33] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-04-14/BOINC_MCORE/6603671610.out
[2025-04-15 18:18:33] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-04-14/BOINC_MCORE/6603671610.out
[2025-04-15 18:18:33] + export PILOT_NOKILL=YES
[2025-04-15 18:18:33] + PILOT_NOKILL=YES
[2025-04-15 18:18:33] + export GRID_GLOBAL_JOBID=mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 18:18:33] + GRID_GLOBAL_JOBID=mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 18:18:33] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 18:18:33] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 18:18:33] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-04-15 18:18:33] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-04-15 18:18:33] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-04-15 18:18:33] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-04-15 18:18:33] ++ pwd
[2025-04-15 18:18:33] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot52/slots/0
[2025-04-15 18:18:33] + RUNTIME_JOB_STDIN=/dev/null
[2025-04-15 18:18:33] ++ pwd
[2025-04-15 18:18:33] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot52/slots/0/log.44075483._021468.job.log.1
[2025-04-15 18:18:33] ++ pwd
[2025-04-15 18:18:33] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot52/slots/0/log.44075483._021468.job.log.1
[2025-04-15 18:18:33] ++ pwd
[2025-04-15 18:18:33] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot52/slots/0.diag
[2025-04-15 18:18:33] + '[' '!' -z '' ']'
[2025-04-15 18:18:33] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-04-15 18:18:33] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-04-15 18:18:33] + RUNTIME_FRONTEND_SEES_NODE=
[2025-04-15 18:18:33] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-04-15 18:18:33] + '[' '!' -z '' ']'
[2025-04-15 18:18:33] + '[' -z yes ']'
[2025-04-15 18:18:33] ++ pwd
[2025-04-15 18:18:33] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag
[2025-04-15 18:18:33] + runtimeenvironments=
[2025-04-15 18:18:33] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-04-15 18:18:33] + RTE_function_0 1
[2025-04-15 18:18:33] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 18:18:33] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 18:18:33] + export BOINC_APP=ATLAS
[2025-04-15 18:18:33] + BOINC_APP=ATLAS
[2025-04-15 18:18:33] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 18:18:33] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 18:18:33] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 18:18:33] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 18:18:33] + '[' -z 1 ']'
[2025-04-15 18:18:33] + '[' 1 == 1 ']'
[2025-04-15 18:18:33] + shift
[2025-04-15 18:18:33] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-04-15 18:18:33] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 18:18:33] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-04-15 18:18:33] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 18:18:33] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 18:18:33] + '[' -e /scratch/boinc/var/slot52/slots/0/init_data.xml ']'
[2025-04-15 18:18:33] + grep '<use_http_proxy/>' /scratch/boinc/var/slot52/slots/0/init_data.xml
[2025-04-15 18:18:33] + '[' -e /scratch/boinc/var/slot52/slots/0/init_data.xml ']'
[2025-04-15 18:18:33] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot52/slots/0/init_data.xml
[2025-04-15 18:18:33] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-04-15 18:18:33] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 18:18:33] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-04-15 18:18:33] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 18:18:33] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 18:18:33] + '[' 0 -ne 0 ']'
[2025-04-15 18:18:33] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-04-15 18:18:33] + '[' -f /etc/os-release ']'
[2025-04-15 18:18:33] +++ cat /etc/os-release
[2025-04-15 18:18:33] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-04-15 18:18:33] +++ NAME='CentOS Linux'
[2025-04-15 18:18:33] +++ VERSION='7 (Core)'
[2025-04-15 18:18:33] +++ ID=centos
[2025-04-15 18:18:33] +++ ID_LIKE='rhel fedora'
[2025-04-15 18:18:33] +++ VERSION_ID=7
[2025-04-15 18:18:33] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-04-15 18:18:33] +++ ANSI_COLOR='0;31'
[2025-04-15 18:18:33] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-04-15 18:18:33] +++ HOME_URL=https://www.centos.org/
[2025-04-15 18:18:33] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-04-15 18:18:33] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-04-15 18:18:33] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-04-15 18:18:33] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-04-15 18:18:33] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-04-15 18:18:33] ++ echo 'CentOS Linux 7 (Core)'
[2025-04-15 18:18:33] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-04-15 18:18:33] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-04-15 18:18:33] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-04-15 18:18:33] + HOME=/scratch/boinc/var/slot52/slots/0
[2025-04-15 18:18:33] + export HOME
[2025-04-15 18:18:33] + cd /scratch/boinc/var/slot52/slots/0
[2025-04-15 18:18:33] + '[' '!' -z '' ']'
[2025-04-15 18:18:33] + '[' -z '' ']'
[2025-04-15 18:18:33] ++ /bin/hostname -f
[2025-04-15 18:18:33] + nodename=skurut11.grid.cesnet.cz
[2025-04-15 18:18:33] + echo nodename=skurut11.grid.cesnet.cz
[2025-04-15 18:18:33] + echo Processors=2
[2025-04-15 18:18:33] + echo Nodecount=1
[2025-04-15 18:18:33] + echo Benchmark=HEPSPEC:1.0
[2025-04-15 18:18:33] + executable=./runpilot2-wrapper.sh
[2025-04-15 18:18:33] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-04-15 18:18:33] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-04-15 18:18:33] ++ head -n 1
[2025-04-15 18:18:33] ++ tr -d '\0'
[2025-04-15 18:18:33] + line1='#!/bin/bash'
[2025-04-15 18:18:33] ++ echo '#!/bin/bash'
[2025-04-15 18:18:33] ++ sed -n 's/^#! *//p'
[2025-04-15 18:18:33] + shebang=/bin/bash
[2025-04-15 18:18:33] ++ echo /bin/bash
[2025-04-15 18:18:33] ++ awk '{print $1}'
[2025-04-15 18:18:33] + interpreter=/bin/bash
[2025-04-15 18:18:33] + '[' /bin/bash = /usr/bin/env ']'
[2025-04-15 18:18:33] + '[' x/bin/bash = x ']'
[2025-04-15 18:18:33] + type /bin/bash
[2025-04-15 18:18:33] + '[' xgnutime = xgnutime ']'
[2025-04-15 18:18:33] + /usr/bin/time -o /scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-04-15 18:18:33] + RESULT=2
[2025-04-15 18:18:33] + sed -i -e /nodename=/d /scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag
[2025-04-15 18:18:33] ++ grep domain_name init_data.xml
[2025-04-15 18:18:33] ++ awk -F '>' '{print $2}'
[2025-04-15 18:18:33] ++ awk -F '<' '{print $1}'
[2025-04-15 18:18:33] ++ sed -e 's# #_#g'
[2025-04-15 18:18:33] + hostname=skurut11.grid.cesnet.cz
[2025-04-15 18:18:33] ++ grep user_name init_data.xml
[2025-04-15 18:18:33] ++ awk -F '>' '{print $2}'
[2025-04-15 18:18:33] ++ awk -F '<' '{print $1}'
[2025-04-15 18:18:33] ++ sed -e 's# #_#g'
[2025-04-15 18:18:33] + username=praguelcg2
[2025-04-15 18:18:33] + nodename=praguelcg2@skurut11.grid.cesnet.cz
[2025-04-15 18:18:33] + echo nodename=praguelcg2@skurut11.grid.cesnet.cz
[2025-04-15 18:18:33] + '[' -n 4 ']'
[2025-04-15 18:18:33] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag
[2025-04-15 18:18:33] + echo exitcode=2
[2025-04-15 18:18:33] + runtimeenvironments=
[2025-04-15 18:18:33] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-04-15 18:18:33] + RTE_function_0 2
[2025-04-15 18:18:33] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 18:18:33] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 18:18:33] + export BOINC_APP=ATLAS
[2025-04-15 18:18:33] + BOINC_APP=ATLAS
[2025-04-15 18:18:33] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 18:18:33] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 18:18:33] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 18:18:33] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 18:18:33] + '[' -z 2 ']'
[2025-04-15 18:18:33] + '[' 2 == 1 ']'
[2025-04-15 18:18:33] + '[' 0 -ne 0 ']'
[2025-04-15 18:18:33] + echo 'zip all output files'
[2025-04-15 18:18:33] + flist='*.diag '
[2025-04-15 18:18:33] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 18:18:33] + '[' -e ./heartbeat.json ']'
[2025-04-15 18:18:33] + flist='*.diag ./heartbeat.json'
[2025-04-15 18:18:33] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 18:18:33] + '[' -e ./output.list ']'
[2025-04-15 18:18:33] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 18:18:33] + '[' -e ./log.44075483._021468.job.log.1 ']'
[2025-04-15 18:18:33] + flist='*.diag ./heartbeat.json ./log.44075483._021468.job.log.1'
[2025-04-15 18:18:33] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 18:18:33] + '[' -e ./log.44075483._021468.job.log.1 ']'
[2025-04-15 18:18:33] + flist='*.diag ./heartbeat.json ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1'
[2025-04-15 18:18:33] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 18:18:33] + '[' -e ./gmlog/ ']'
[2025-04-15 18:18:33] + '[' -f output.list ']'
[2025-04-15 18:18:33] + tar cvf result.tar.gz mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag ./heartbeat.json ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1
[2025-04-15 18:18:33] + '[' xgnutime = xcgroup ']'
[2025-04-15 18:18:33] + '[' -n '' ']'
[2025-04-15 18:18:33] + '[' -n '' ']'
[2025-04-15 18:18:33] ++ date +%s
[2025-04-15 18:18:33] + ACCOUNTING_ENDTIME=1744733882
[2025-04-15 18:18:33] ++ date -d '1970-01-01 UTC 1744733691 seconds' +%Y%m%d%H%M%SZ
[2025-04-15 18:18:33] + echo LRMSStartTime=20250415181451Z
[2025-04-15 18:18:33] ++ date -d '1970-01-01 UTC 1744733882 seconds' +%Y%m%d%H%M%SZ
[2025-04-15 18:18:33] + echo LRMSEndTime=20250415181802Z
[2025-04-15 18:18:33] + echo walltime=191
[2025-04-15 18:18:33] + echo exitcode=2
[2025-04-15 18:18:33] + exit 2
[2025-04-15 18:18:33] ./PanDA_Pilot-6603671610/pilotlog.txt
[2025-04-15 18:18:33] ./PanDA_Pilot-6603671610/prmon.log
[2025-04-15 18:18:33] ./PanDA_Pilot-6603671610/PoolFileCatalog.xml
[2025-04-15 18:18:33] ./PanDA_Pilot-6603671610/log.EVNTtoHITS
[2025-04-15 18:18:33] ./log.44075483._021468.job.log.tgz.1
[2025-04-15 18:18:33] ./pilotlog.txt
[2025-04-15 18:18:33] ./pilot3/pilot/util/loggingsupport.py
[2025-04-15 18:18:33] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-04-15 18:18:33] ./pilot3/pilot/util/realtimelogger.py
[2025-04-15 18:18:33] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-04-15 18:18:33] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-04-15 18:18:33] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-04-15 18:18:33] ./runtime_log
[2025-04-15 18:18:33] ./runtime_log.err
[2025-04-15 18:18:33] ./log.44075483._021468.job.log.1
22:43:34 (1168062): wrapper (7.7.26015): starting
22:43:34 (1168062): wrapper: running run_atlas (--nthreads 4)
[2025-04-15 22:43:34] Arguments: --nthreads 4
[2025-04-15 22:43:34] Threads: 4
[2025-04-15 22:43:34] This job has been restarted, cleaning up previous attempt
[2025-04-15 22:43:34] Checking for CVMFS
[2025-04-15 22:43:34] No cvmfs_config command found, will try listing directly
[2025-04-15 22:43:34] CVMFS is ok
[2025-04-15 22:43:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 22:43:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 22:43:34] Further information can be found at the LHC@home message board.
[2025-04-15 22:43:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 22:43:34] Checking for apptainer binary...
[2025-04-15 22:43:34] which: no apptainer in ((null))
[2025-04-15 22:43:34] apptainer is not installed, using version from CVMFS
[2025-04-15 22:43:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 22:43:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-04-15 22:43:34] apptainer works
[2025-04-15 22:43:34] Set ATHENA_PROC_NUMBER=4
[2025-04-15 22:43:34] Set ATHENA_CORE_NUMBER=4
[2025-04-15 22:43:34] Starting ATLAS job with PandaID=6603671610
[2025-04-15 22:43:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-15 22:47:06] Job failed
[2025-04-15 22:47:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-04-15 22:47:06] ++ pwd
[2025-04-15 22:47:06] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 22:47:06] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 22:47:06] + mv ATLAS.root_0 EVNT.44075481._000833.pool.root.1
[2025-04-15 22:47:06] mv: 'ATLAS.root_0' and 'EVNT.44075481._000833.pool.root.1' are the same file
[2025-04-15 22:47:06] + tar --strip-components=5 -xvf input.tar.gz
[2025-04-15 22:47:06] + umask 077
[2025-04-15 22:47:06] ++ date +%s
[2025-04-15 22:47:06] + ACCOUNTING_STARTTIME=1744749814
[2025-04-15 22:47:06] + echo 'Detecting resource accounting method available for the job.'
[2025-04-15 22:47:06] Detecting resource accounting method available for the job.
[2025-04-15 22:47:06] + JOB_ACCOUNTING=
[2025-04-15 22:47:06] + command -v arc-job-cgroup
[2025-04-15 22:47:06] + '[' -z '' ']'
[2025-04-15 22:47:06] + GNU_TIME=/usr/bin/time
[2025-04-15 22:47:06] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-04-15 22:47:06] Looking for /usr/bin/time tool for accounting measurements
[2025-04-15 22:47:06] + '[' '!' -z /usr/bin/time ']'
[2025-04-15 22:47:06] + /usr/bin/time --version
[2025-04-15 22:47:06] + echo 'GNU time found and will be used for job accounting.'
[2025-04-15 22:47:06] GNU time found and will be used for job accounting.
[2025-04-15 22:47:06] + JOB_ACCOUNTING=gnutime
[2025-04-15 22:47:06] + '[' -z gnutime ']'
[2025-04-15 22:47:06] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-04-15 22:47:06] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-04-15 22:47:06] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-04-14/BOINC_MCORE/6603671610.out
[2025-04-15 22:47:06] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-04-14/BOINC_MCORE/6603671610.out
[2025-04-15 22:47:06] + export PILOT_NOKILL=YES
[2025-04-15 22:47:06] + PILOT_NOKILL=YES
[2025-04-15 22:47:06] + export GRID_GLOBAL_JOBID=mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 22:47:06] + GRID_GLOBAL_JOBID=mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 22:47:06] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 22:47:06] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n
[2025-04-15 22:47:06] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-04-15 22:47:06] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-04-15 22:47:06] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-04-15 22:47:06] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-04-15 22:47:06] ++ pwd
[2025-04-15 22:47:06] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot52/slots/0
[2025-04-15 22:47:06] + RUNTIME_JOB_STDIN=/dev/null
[2025-04-15 22:47:06] ++ pwd
[2025-04-15 22:47:06] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot52/slots/0/log.44075483._021468.job.log.1
[2025-04-15 22:47:06] ++ pwd
[2025-04-15 22:47:06] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot52/slots/0/log.44075483._021468.job.log.1
[2025-04-15 22:47:06] ++ pwd
[2025-04-15 22:47:06] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot52/slots/0.diag
[2025-04-15 22:47:06] + '[' '!' -z '' ']'
[2025-04-15 22:47:06] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-04-15 22:47:06] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-04-15 22:47:06] + RUNTIME_FRONTEND_SEES_NODE=
[2025-04-15 22:47:06] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-04-15 22:47:06] + '[' '!' -z '' ']'
[2025-04-15 22:47:06] + '[' -z yes ']'
[2025-04-15 22:47:06] ++ pwd
[2025-04-15 22:47:06] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag
[2025-04-15 22:47:06] + runtimeenvironments=
[2025-04-15 22:47:06] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-04-15 22:47:06] + RTE_function_0 1
[2025-04-15 22:47:06] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 22:47:06] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 22:47:06] + export BOINC_APP=ATLAS
[2025-04-15 22:47:06] + BOINC_APP=ATLAS
[2025-04-15 22:47:06] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 22:47:06] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 22:47:06] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 22:47:06] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 22:47:06] + '[' -z 1 ']'
[2025-04-15 22:47:06] + '[' 1 == 1 ']'
[2025-04-15 22:47:06] + shift
[2025-04-15 22:47:06] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-04-15 22:47:06] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 22:47:06] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-04-15 22:47:06] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 22:47:06] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot52/slots/0/
[2025-04-15 22:47:06] + '[' -e /scratch/boinc/var/slot52/slots/0/init_data.xml ']'
[2025-04-15 22:47:06] + grep '<use_http_proxy/>' /scratch/boinc/var/slot52/slots/0/init_data.xml
[2025-04-15 22:47:06] + '[' -e /scratch/boinc/var/slot52/slots/0/init_data.xml ']'
[2025-04-15 22:47:06] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot52/slots/0/init_data.xml
[2025-04-15 22:47:06] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-04-15 22:47:06] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 22:47:06] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-04-15 22:47:06] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 22:47:06] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-04-15 22:47:06] + '[' 0 -ne 0 ']'
[2025-04-15 22:47:06] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-04-15 22:47:06] + '[' -f /etc/os-release ']'
[2025-04-15 22:47:06] +++ cat /etc/os-release
[2025-04-15 22:47:06] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-04-15 22:47:06] +++ NAME='CentOS Linux'
[2025-04-15 22:47:06] +++ VERSION='7 (Core)'
[2025-04-15 22:47:06] +++ ID=centos
[2025-04-15 22:47:06] +++ ID_LIKE='rhel fedora'
[2025-04-15 22:47:06] +++ VERSION_ID=7
[2025-04-15 22:47:06] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-04-15 22:47:06] +++ ANSI_COLOR='0;31'
[2025-04-15 22:47:06] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-04-15 22:47:06] +++ HOME_URL=https://www.centos.org/
[2025-04-15 22:47:06] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-04-15 22:47:06] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-04-15 22:47:06] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-04-15 22:47:06] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-04-15 22:47:06] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-04-15 22:47:06] ++ echo 'CentOS Linux 7 (Core)'
[2025-04-15 22:47:06] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-04-15 22:47:06] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-04-15 22:47:06] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-04-15 22:47:06] + HOME=/scratch/boinc/var/slot52/slots/0
[2025-04-15 22:47:06] + export HOME
[2025-04-15 22:47:06] + cd /scratch/boinc/var/slot52/slots/0
[2025-04-15 22:47:06] + '[' '!' -z '' ']'
[2025-04-15 22:47:06] + '[' -z '' ']'
[2025-04-15 22:47:06] ++ /bin/hostname -f
[2025-04-15 22:47:06] + nodename=skurut11.grid.cesnet.cz
[2025-04-15 22:47:06] + echo nodename=skurut11.grid.cesnet.cz
[2025-04-15 22:47:06] + echo Processors=2
[2025-04-15 22:47:06] + echo Nodecount=1
[2025-04-15 22:47:06] + echo Benchmark=HEPSPEC:1.0
[2025-04-15 22:47:06] + executable=./runpilot2-wrapper.sh
[2025-04-15 22:47:06] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-04-15 22:47:06] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-04-15 22:47:06] ++ head -n 1
[2025-04-15 22:47:06] ++ tr -d '\0'
[2025-04-15 22:47:06] + line1='#!/bin/bash'
[2025-04-15 22:47:06] ++ echo '#!/bin/bash'
[2025-04-15 22:47:06] ++ sed -n 's/^#! *//p'
[2025-04-15 22:47:06] + shebang=/bin/bash
[2025-04-15 22:47:06] ++ echo /bin/bash
[2025-04-15 22:47:06] ++ awk '{print $1}'
[2025-04-15 22:47:06] + interpreter=/bin/bash
[2025-04-15 22:47:06] + '[' /bin/bash = /usr/bin/env ']'
[2025-04-15 22:47:06] + '[' x/bin/bash = x ']'
[2025-04-15 22:47:06] + type /bin/bash
[2025-04-15 22:47:06] + '[' xgnutime = xgnutime ']'
[2025-04-15 22:47:06] + /usr/bin/time -o /scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-04-15 22:47:06] + RESULT=2
[2025-04-15 22:47:06] + sed -i -e /nodename=/d /scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag
[2025-04-15 22:47:06] ++ grep domain_name init_data.xml
[2025-04-15 22:47:06] ++ awk -F '>' '{print $2}'
[2025-04-15 22:47:06] ++ awk -F '<' '{print $1}'
[2025-04-15 22:47:06] ++ sed -e 's# #_#g'
[2025-04-15 22:47:06] + hostname=skurut11.grid.cesnet.cz
[2025-04-15 22:47:06] ++ grep user_name init_data.xml
[2025-04-15 22:47:06] ++ awk -F '>' '{print $2}'
[2025-04-15 22:47:06] ++ awk -F '<' '{print $1}'
[2025-04-15 22:47:06] ++ sed -e 's# #_#g'
[2025-04-15 22:47:06] + username=praguelcg2
[2025-04-15 22:47:06] + nodename=praguelcg2@skurut11.grid.cesnet.cz
[2025-04-15 22:47:06] + echo nodename=praguelcg2@skurut11.grid.cesnet.cz
[2025-04-15 22:47:06] + '[' -n 4 ']'
[2025-04-15 22:47:06] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot52/slots/0/mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag
[2025-04-15 22:47:06] + echo exitcode=2
[2025-04-15 22:47:06] + runtimeenvironments=
[2025-04-15 22:47:06] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-04-15 22:47:06] + RTE_function_0 2
[2025-04-15 22:47:06] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 22:47:06] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-04-15 22:47:06] + export BOINC_APP=ATLAS
[2025-04-15 22:47:06] + BOINC_APP=ATLAS
[2025-04-15 22:47:06] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 22:47:06] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-04-15 22:47:06] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 22:47:06] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-04-15 22:47:06] + '[' -z 2 ']'
[2025-04-15 22:47:06] + '[' 2 == 1 ']'
[2025-04-15 22:47:06] + '[' 0 -ne 0 ']'
[2025-04-15 22:47:06] + echo 'zip all output files'
[2025-04-15 22:47:06] + flist='*.diag '
[2025-04-15 22:47:06] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 22:47:06] + '[' -e ./heartbeat.json ']'
[2025-04-15 22:47:06] + flist='*.diag ./heartbeat.json'
[2025-04-15 22:47:06] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 22:47:06] + '[' -e ./output.list ']'
[2025-04-15 22:47:06] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 22:47:06] + '[' -e ./log.44075483._021468.job.log.1 ']'
[2025-04-15 22:47:06] + flist='*.diag ./heartbeat.json ./log.44075483._021468.job.log.1'
[2025-04-15 22:47:06] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 22:47:06] + '[' -e ./log.44075483._021468.job.log.1 ']'
[2025-04-15 22:47:06] + flist='*.diag ./heartbeat.json ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1'
[2025-04-15 22:47:06] + for f in ./heartbeat.json ./output.list ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1 ./gmlog/
[2025-04-15 22:47:06] + '[' -e ./gmlog/ ']'
[2025-04-15 22:47:06] + '[' -f output.list ']'
[2025-04-15 22:47:06] + tar cvf result.tar.gz mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag ./heartbeat.json ./log.44075483._021468.job.log.1 ./log.44075483._021468.job.log.1
[2025-04-15 22:47:06] + '[' xgnutime = xcgroup ']'
[2025-04-15 22:47:06] + '[' -n '' ']'
[2025-04-15 22:47:06] + '[' -n '' ']'
[2025-04-15 22:47:06] ++ date +%s
[2025-04-15 22:47:06] + ACCOUNTING_ENDTIME=1744750006
[2025-04-15 22:47:06] ++ date -d '1970-01-01 UTC 1744749814 seconds' +%Y%m%d%H%M%SZ
[2025-04-15 22:47:06] + echo LRMSStartTime=20250415224334Z
[2025-04-15 22:47:06] ++ date -d '1970-01-01 UTC 1744750006 seconds' +%Y%m%d%H%M%SZ
[2025-04-15 22:47:06] + echo LRMSEndTime=20250415224646Z
[2025-04-15 22:47:06] + echo walltime=192
[2025-04-15 22:47:06] + echo exitcode=2
[2025-04-15 22:47:06] + exit 2
[2025-04-15 22:47:06] ./PanDA_Pilot-6603671610/pilotlog.txt
[2025-04-15 22:47:06] ./PanDA_Pilot-6603671610/prmon.log
[2025-04-15 22:47:06] ./PanDA_Pilot-6603671610/PoolFileCatalog.xml
[2025-04-15 22:47:06] ./PanDA_Pilot-6603671610/log.EVNTtoHITS
[2025-04-15 22:47:06] ./log.44075483._021468.job.log.tgz.1
[2025-04-15 22:47:06] ./pilotlog.txt
[2025-04-15 22:47:06] ./pilot3/pilot/util/loggingsupport.py
[2025-04-15 22:47:06] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-04-15 22:47:06] ./pilot3/pilot/util/realtimelogger.py
[2025-04-15 22:47:06] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-04-15 22:47:06] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-04-15 22:47:06] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-04-15 22:47:06] ./runtime_log
[2025-04-15 22:47:06] ./runtime_log.err
[2025-04-15 22:47:06] ./log.44075483._021468.job.log.1
23:42:06 (1461329): wrapper (7.7.26015): starting
23:42:06 (1461329): wrapper: running run_atlas (--nthreads 4)
[2025-04-15 23:42:06] Arguments: --nthreads 4
[2025-04-15 23:42:06] Threads: 4
[2025-04-15 23:42:06] This job has been restarted, cleaning up previous attempt
[2025-04-15 23:42:06] Checking for CVMFS
[2025-04-15 23:42:06] No cvmfs_config command found, will try listing directly
[2025-04-15 23:42:06] CVMFS is ok
[2025-04-15 23:42:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-15 23:42:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-15 23:42:06] Further information can be found at the LHC@home message board.
[2025-04-15 23:42:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-15 23:42:06] Checking for apptainer binary...
[2025-04-15 23:42:06] which: no apptainer in ((null))
[2025-04-15 23:42:06] apptainer is not installed, using version from CVMFS
[2025-04-15 23:42:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-15 23:42:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-04-15 23:42:07] apptainer works
[2025-04-15 23:42:07] Set ATHENA_PROC_NUMBER=4
[2025-04-15 23:42:07] Set ATHENA_CORE_NUMBER=4
[2025-04-15 23:42:07] Starting ATLAS job with PandaID=6603671610
[2025-04-15 23:42:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 02:09:35] *** The last 200 lines of the pilot log: ***
[2025-04-16 02:09:35] 2025-04-16 00:09:21,310 | INFO | sum of square deviations: 925859220.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,311 | INFO | sum of deviations: 60712251379.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,311 | INFO | mean x: 1744757726.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,311 | INFO | mean y: 2228446.0625
[2025-04-16 02:09:35] 2025-04-16 00:09:21,311 | INFO | -- intersect: -114408437235.47913
[2025-04-16 02:09:35] 2025-04-16 00:09:21,311 | INFO | intersect: -114408437235.47913
[2025-04-16 02:09:35] 2025-04-16 00:09:21,312 | INFO | chi2: 4.147457144721142
[2025-04-16 02:09:35] 2025-04-16 00:09:21,312 | INFO | sum of square deviations: 832722590.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,313 | INFO | sum of deviations: 58489877389.000015
[2025-04-16 02:09:35] 2025-04-16 00:09:21,313 | INFO | mean x: 1744757574.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,313 | INFO | mean y: 2224805.7769784173
[2025-04-16 02:09:35] 2025-04-16 00:09:21,313 | INFO | -- intersect: -122548379443.81966
[2025-04-16 02:09:35] 2025-04-16 00:09:21,314 | INFO | intersect: -122548379443.81966
[2025-04-16 02:09:35] 2025-04-16 00:09:21,314 | INFO | chi2: 4.143341720172806
[2025-04-16 02:09:35] 2025-04-16 00:09:21,314 | INFO | current chi2=4.143341720172806 (change=0.09922765696503402 %)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,314 | INFO | right removable region: 138
[2025-04-16 02:09:35] 2025-04-16 00:09:21,315 | INFO | sum of square deviations: 832722590.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,315 | INFO | sum of deviations: 28110958851.000004
[2025-04-16 02:09:35] 2025-04-16 00:09:21,315 | INFO | mean x: 1744757879.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,316 | INFO | mean y: 2281626.5827338127
[2025-04-16 02:09:35] 2025-04-16 00:09:21,316 | INFO | -- intersect: -58897065563.61064
[2025-04-16 02:09:35] 2025-04-16 00:09:21,316 | INFO | intersect: -58897065563.61064
[2025-04-16 02:09:35] 2025-04-16 00:09:21,316 | INFO | chi2: 1.6013505852505938
[2025-04-16 02:09:35] 2025-04-16 00:09:21,316 | INFO | current chi2=1.6013505852505938 (change=61.38958090769465 %)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,316 | INFO | sum of square deviations: 746051197.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,317 | INFO | sum of deviations: 1692790839.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,317 | INFO | mean x: 1744758031.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,317 | INFO | mean y: 2328123.8283582088
[2025-04-16 02:09:35] 2025-04-16 00:09:21,317 | INFO | -- intersect: -3956529422.093954
[2025-04-16 02:09:35] 2025-04-16 00:09:21,318 | INFO | intersect: -3956529422.093954
[2025-04-16 02:09:35] 2025-04-16 00:09:21,318 | INFO | chi2: 0.06077345128714389
[2025-04-16 02:09:35] 2025-04-16 00:09:21,318 | INFO | current chi2=0.06077345128714389 (change=96.20486282973235 %)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,318 | INFO | sum of square deviations: 665612480.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,319 | INFO | sum of deviations: -1539608158.0000002
[2025-04-16 02:09:35] 2025-04-16 00:09:21,319 | INFO | mean x: 1744758184.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,319 | INFO | mean y: 2334115.612403101
[2025-04-16 02:09:35] 2025-04-16 00:09:21,319 | INFO | -- intersect: 4038081663.229998
[2025-04-16 02:09:35] 2025-04-16 00:09:21,319 | INFO | intersect: 4038081663.229998
[2025-04-16 02:09:35] 2025-04-16 00:09:21,320 | INFO | chi2: 0.0010313076035372121
[2025-04-16 02:09:35] 2025-04-16 00:09:21,320 | INFO | current chi2=0.0010313076035372121 (change=98.30302939573981 %)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,320 | INFO | sum of square deviations: 591173875.0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | sum of deviations: -1408826537.0000002
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | mean x: 1744758336.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | mean y: 2333842.290322581
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | -- intersect: 4160267656.7931643
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | intersect: 4160267656.7931643
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | chi2: 0.000991075361964018
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | current chi2=0.000991075361964018 (change=3.901090366754245 %)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,321 | INFO | left removable region: 40
[2025-04-16 02:09:35] 2025-04-16 00:09:21,322 | INFO | sum of square deviations: 291817564.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,322 | INFO | sum of deviations: -103575712.49999997
[2025-04-16 02:09:35] 2025-04-16 00:09:21,322 | INFO | mean x: 1744758763.5
[2025-04-16 02:09:35] 2025-04-16 00:09:21,322 | INFO | mean y: 2330576.4795918367
[2025-04-16 02:09:35] 2025-04-16 00:09:21,323 | INFO | -- intersect: 621603211.3525741
[2025-04-16 02:09:35] 2025-04-16 00:09:21,323 | INFO | intersect: 621603211.3525741
[2025-04-16 02:09:35] 2025-04-16 00:09:21,323 | INFO | chi2: 0.0002372273859755975
[2025-04-16 02:09:35] 2025-04-16 00:09:21,323 | INFO | -- intersect: 621603211.3525741
[2025-04-16 02:09:35] 2025-04-16 00:09:21,323 | INFO | current memory leak: -0.35 B/s (using 98 data points, chi2=0.00)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,324 | INFO | ..............................
[2025-04-16 02:09:35] 2025-04-16 00:09:21,324 | INFO | . Timing measurements:
[2025-04-16 02:09:35] 2025-04-16 00:09:21,324 | INFO | . get job = 0 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,324 | INFO | . initial setup = 1 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,325 | INFO | . payload setup = 6 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,325 | INFO | . stage-in = 0 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,325 | INFO | . payload execution = 8786 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,325 | INFO | . stage-out = 1 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,325 | INFO | . log creation = 0 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,325 | INFO | ..............................
[2025-04-16 02:09:35] 2025-04-16 00:09:21,729 | INFO |
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | job summary report
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | --------------------------------------------------
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | PanDA job id: 6603671610
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | task id: 44075483
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | errors: (none)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | status: LOG_TRANSFER = DONE
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | pilot state: finished
[2025-04-16 02:09:35] 2025-04-16 00:09:21,730 | INFO | transexitcode: 0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | exeerrorcode: 0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | exeerrordiag:
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | exitcode: 0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | exitmsg: OK
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | cpuconsumptiontime: 32199 s
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | nevents: 400
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | neventsw: 0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | pid: 1482690
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | pgrp: 1482690
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | corecount: 4
[2025-04-16 02:09:35] 2025-04-16 00:09:21,731 | INFO | event service: False
[2025-04-16 02:09:35] 2025-04-16 00:09:21,732 | INFO | sizes: {0: 2417374, 6: 2417580, 11: 2417608, 8797: 2445971, 8799: 2454934, 8801: 2454990, 8808: 2455288}
[2025-04-16 02:09:35] 2025-04-16 00:09:21,732 | INFO | --------------------------------------------------
[2025-04-16 02:09:35] 2025-04-16 00:09:21,732 | INFO |
[2025-04-16 02:09:35] 2025-04-16 00:09:21,732 | INFO | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-04-16 02:09:35] 2025-04-16 00:09:21,761 | INFO | queue jobs had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,761 | INFO | queue payloads had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,761 | INFO | queue data_in had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,761 | INFO | queue data_out had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,761 | INFO | queue current_data_in had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,761 | INFO | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,761 | INFO | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,762 | INFO | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,763 | INFO | queue completed_jobids has 1 job(s)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,763 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,763 | INFO | queue messages had 0 job(s) [purged]
[2025-04-16 02:09:35] 2025-04-16 00:09:21,763 | INFO | job 6603671610 has completed (purged errors)
[2025-04-16 02:09:35] 2025-04-16 00:09:21,763 | INFO | overall cleanup function is called
[2025-04-16 02:09:35] 2025-04-16 00:09:22,771 | INFO | --- collectZombieJob: --- 10, [1482690]
[2025-04-16 02:09:35] 2025-04-16 00:09:22,771 | INFO | zombie collector waiting for pid 1482690
[2025-04-16 02:09:35] 2025-04-16 00:09:22,772 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 02:09:35] 2025-04-16 00:09:22,772 | INFO | collected zombie processes
[2025-04-16 02:09:35] 2025-04-16 00:09:22,772 | INFO | will attempt to kill all subprocesses of pid=1482690
[2025-04-16 02:09:35] 2025-04-16 00:09:23,445 | INFO | process IDs to be killed: [1482690] (in reverse order)
[2025-04-16 02:09:35] 2025-04-16 00:09:23,697 | WARNING | found no corresponding commands to process id(s)
[2025-04-16 02:09:35] 2025-04-16 00:09:23,698 | INFO | Do not look for orphan processes in BOINC jobs
[2025-04-16 02:09:35] 2025-04-16 00:09:23,725 | INFO | did not find any defunct processes belonging to 1482690
[2025-04-16 02:09:35] 2025-04-16 00:09:23,748 | INFO | did not find any defunct processes belonging to 1482690
[2025-04-16 02:09:35] 2025-04-16 00:09:23,748 | INFO | ready for new job
[2025-04-16 02:09:35] 2025-04-16 00:09:23,749 | INFO | pilot has finished with previous job - re-establishing logging
[2025-04-16 02:09:35] 2025-04-16 00:09:23,751 | INFO | **************************************
[2025-04-16 02:09:35] 2025-04-16 00:09:23,751 | INFO | *** PanDA Pilot version 3.10.2.2 ***
[2025-04-16 02:09:35] 2025-04-16 00:09:23,751 | INFO | **************************************
[2025-04-16 02:09:35] 2025-04-16 00:09:23,751 | INFO |
[2025-04-16 02:09:35] 2025-04-16 00:09:23,759 | INFO | architecture information:
[2025-04-16 02:09:35] 2025-04-16 00:09:23,760 | INFO | executing command: cat /etc/os-release
[2025-04-16 02:09:35] 2025-04-16 00:09:23,784 | INFO | cat /etc/os-release:
[2025-04-16 02:09:35] NAME="CentOS Linux"
[2025-04-16 02:09:35] VERSION="7 (Core)"
[2025-04-16 02:09:35] ID="centos"
[2025-04-16 02:09:35] ID_LIKE="rhel fedora"
[2025-04-16 02:09:35] VERSION_ID="7"
[2025-04-16 02:09:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 02:09:35] ANSI_COLOR="0;31"
[2025-04-16 02:09:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 02:09:35] HOME_URL="https://www.centos.org/"
[2025-04-16 02:09:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 02:09:35]
[2025-04-16 02:09:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 02:09:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 02:09:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 02:09:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 02:09:35]
[2025-04-16 02:09:35] 2025-04-16 00:09:23,784 | INFO | **************************************
[2025-04-16 02:09:35] 2025-04-16 00:09:24,287 | INFO | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-04-16 02:09:35] 2025-04-16 00:09:24,313 | INFO | sufficient remaining disk space (3298797027328 B)
[2025-04-16 02:09:35] 2025-04-16 00:09:24,313 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 02:09:35] 2025-04-16 00:09:24,313 | INFO | current server update state: UPDATING_FINAL
[2025-04-16 02:09:35] 2025-04-16 00:09:24,313 | INFO | update_server=False
[2025-04-16 02:09:35] 2025-04-16 00:09:24,314 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 02:09:35] 2025-04-16 00:09:24,314 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 02:09:35] 2025-04-16 00:09:24,314 | INFO | aborting loop
[2025-04-16 02:09:35] 2025-04-16 00:09:24,471 | INFO | all data control threads have been joined
[2025-04-16 02:09:35] 2025-04-16 00:09:24,474 | INFO | all payload control threads have been joined
[2025-04-16 02:09:35] 2025-04-16 00:09:24,477 | INFO | found 0 job(s) in 20 queues
[2025-04-16 02:09:35] 2025-04-16 00:09:24,478 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 02:09:35] 2025-04-16 00:09:24,478 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-04-16 02:09:35] 2025-04-16 00:09:25,091 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 02:09:35] 2025-04-16 00:09:25,318 | INFO | [job] retrieve thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:25,319 | INFO | [job] job monitor thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:25,475 | INFO | [data] control thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:25,478 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 02:09:35] 2025-04-16 00:09:25,479 | INFO | [payload] control thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:25,682 | INFO | [job] validate thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:25,760 | INFO | [payload] validate_post thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:25,802 | INFO | all job control threads have been joined
[2025-04-16 02:09:35] 2025-04-16 00:09:25,832 | INFO | [data] copytool_in thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:26,032 | INFO | [job] create_data_payload thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:26,205 | INFO | [payload] validate_pre thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:26,328 | INFO | [payload] run_realtimelog thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:26,331 | INFO | [payload] execute_payloads thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:26,446 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 02:09:35] 2025-04-16 00:09:26,486 | INFO | [payload] failed_post thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:26,807 | INFO | [job] control thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:27,097 | INFO | [data] copytool_out thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:27,450 | INFO | [job] queue monitor thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:29,484 | INFO | [data] queue_monitor thread has finished
[2025-04-16 02:09:35] 2025-04-16 00:09:30,239 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23318436714304)>', '<ExcThread(monitor, started 23318193190656)>']
[2025-04-16 02:09:35] 2025-04-16 00:09:30,508 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-04-16 02:09:35] 2025-04-16 00:09:30,508 | INFO | [monitor] control thread has ended
[2025-04-16 02:09:35] 2025-04-16 00:09:35,264 | INFO | all workflow threads have been joined
[2025-04-16 02:09:35] 2025-04-16 00:09:35,265 | INFO | end of generic workflow (traces error code: 0)
[2025-04-16 02:09:35] 2025-04-16 00:09:35,265 | INFO | traces error code: 0
[2025-04-16 02:09:35] 2025-04-16 00:09:35,265 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 02:09:35] 2025-04-16 00:09:35,402 [wrapper] ==== pilot stdout END ====
[2025-04-16 02:09:35] 2025-04-16 00:09:35,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 02:09:35] 2025-04-16 00:09:35,409 [wrapper] pilotpid: 1470540
[2025-04-16 02:09:35] 2025-04-16 00:09:35,412 [wrapper] Pilot exit status: 0
[2025-04-16 02:09:35] 2025-04-16 00:09:35,423 [wrapper] pandaids: 6603671610 6603671610 6603671610 6603671610
[2025-04-16 02:09:35] 2025-04-16 00:09:35,536 [wrapper] cleanup supervisor_pilot 2201930 1470543
[2025-04-16 02:09:35] 2025-04-16 00:09:35,540 [wrapper] Test setup, not cleaning
[2025-04-16 02:09:35] 2025-04-16 00:09:35,544 [wrapper] apfmon messages muted
[2025-04-16 02:09:35] 2025-04-16 00:09:35,547 [wrapper] ==== wrapper stdout END ====
[2025-04-16 02:09:35] 2025-04-16 00:09:35,550 [wrapper] ==== wrapper stderr END ====
[2025-04-16 02:09:35] *** Error codes and diagnostics ***
[2025-04-16 02:09:35] "exeErrorCode": 0,
[2025-04-16 02:09:35] "exeErrorDiag": "",
[2025-04-16 02:09:35] "pilotErrorCode": 0,
[2025-04-16 02:09:35] "pilotErrorDiag": "",
[2025-04-16 02:09:35] *** Listing of results directory ***
[2025-04-16 02:09:35] total 623772
[2025-04-16 02:09:35] drwx------ 4 boinc boinc 4096 Apr 3 10:00 pilot3
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 495897 Apr 15 01:13 pilot3.tar.gz
[2025-04-16 02:09:35] -rwx------ 1 boinc boinc 37140 Apr 15 01:35 runpilot2-wrapper.sh
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 5111 Apr 15 01:35 queuedata.json
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 100 Apr 15 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 02:09:35] -rwxr-xr-x 1 boinc boinc 7986 Apr 15 11:13 run_atlas
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 105 Apr 15 11:13 job.xml
[2025-04-16 02:09:35] -rw-r--r-- 3 boinc boinc 222165617 Apr 15 11:13 EVNT.44075481._000833.pool.root.1
[2025-04-16 02:09:35] -rw-r--r-- 3 boinc boinc 222165617 Apr 15 11:13 ATLAS.root_0
[2025-04-16 02:09:35] -rw-r--r-- 2 boinc boinc 17569 Apr 15 11:13 start_atlas.sh
[2025-04-16 02:09:35] -rw-r--r-- 2 boinc boinc 508886 Apr 15 11:13 input.tar.gz
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 0 Apr 15 11:13 boinc_lockfile
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 0 Apr 15 18:15 wrapper_sigint_211184
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 0 Apr 15 18:18 wrapper_sigkill_211184
[2025-04-16 02:09:35] drwxrwx--x 2 boinc boinc 4096 Apr 15 18:18 shared
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 0 Apr 15 22:43 wrapper_sigint_1174308
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 0 Apr 15 22:46 wrapper_sigkill_1174308
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 6680 Apr 15 23:42 init_data.xml
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 2577 Apr 15 23:42 pandaJob.out
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 424 Apr 15 23:42 setup.sh.local
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 985983 Apr 15 23:42 agis_schedconf.cvmfs.json
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 188291106 Apr 16 02:08 HITS.44075483._021468.pool.root.1
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 530 Apr 16 02:08 boinc_task_state.xml
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 98 Apr 16 02:08 pilot_heartbeat.json
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 1030 Apr 16 02:09 memory_monitor_summary.json
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 8192 Apr 16 02:09 boinc_mmap_file
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 27 Apr 16 02:09 wrapper_checkpoint.txt
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 1603529 Apr 16 02:09 agis_ddmendpoints.agis.ALL.json
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 285766 Apr 16 02:09 log.44075483._021468.job.log.tgz.1
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 7697 Apr 16 02:09 heartbeat.json
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 4364 Apr 16 02:09 pilotlog.txt
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 827632 Apr 16 02:09 log.44075483._021468.job.log.1
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 357 Apr 16 02:09 output.list
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 620 Apr 16 02:09 runtime_log
[2025-04-16 02:09:35] -rw-r--r-- 2 boinc boinc 1136640 Apr 16 02:09 result.tar.gz
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 11500 Apr 16 02:09 runtime_log.err
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 1993 Apr 16 02:09 mr8LDmqViO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR8WLDmwq5V4n.diag
[2025-04-16 02:09:35] -rw-r--r-- 1 boinc boinc 58349 Apr 16 02:09 stderr.txt
[2025-04-16 02:09:35] HITS file was successfully produced:
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 188291106 Apr 16 02:08 shared/HITS.pool.root.1
[2025-04-16 02:09:35] *** Contents of shared directory: ***
[2025-04-16 02:09:35] total 402480
[2025-04-16 02:09:35] -rw-r--r-- 3 boinc boinc 222165617 Apr 15 11:13 ATLAS.root_0
[2025-04-16 02:09:35] -rw-r--r-- 2 boinc boinc 17569 Apr 15 11:13 start_atlas.sh
[2025-04-16 02:09:35] -rw-r--r-- 2 boinc boinc 508886 Apr 15 11:13 input.tar.gz
[2025-04-16 02:09:35] -rw------- 1 boinc boinc 188291106 Apr 16 02:08 HITS.pool.root.1
[2025-04-16 02:09:35] -rw-r--r-- 2 boinc boinc 1136640 Apr 16 02:09 result.tar.gz
02:09:37 (1461329): run_atlas exited; CPU time 32702.558175
02:09:37 (1461329): called boinc_finish(0)
</stderr_txt>
]]>
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