Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:50:06 (3407688): wrapper (7.7.26015): starting
21:50:06 (3407688): wrapper: running run_atlas (--nthreads 9)
[2025-04-14 21:50:06] Arguments: --nthreads 9
[2025-04-14 21:50:06] Threads: 9
[2025-04-14 21:50:06] Checking for CVMFS
[2025-04-14 21:50:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-14 21:50:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-14 21:50:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-14 21:50:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-14 21:50:09] 2.12.6.0 4157466 206399 293668 144870 3 239 32810933 32935937 15064 130560 0 48548116 99.556 64508182 31358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-14 21:50:09] CVMFS is ok
[2025-04-14 21:50:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-14 21:50:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-14 21:50:09] Further information can be found at the LHC@home message board.
[2025-04-14 21:50:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-14 21:50:09] Checking for apptainer binary...
[2025-04-14 21:50:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-14 21:50:09] Running /usr/bin/apptainer --version
[2025-04-14 21:50:10] apptainer version 1.4.0-1.el9
[2025-04-14 21:50:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-14 21:50:11] c6-1-24-2.aglt2.org
[2025-04-14 21:50:11] apptainer works
[2025-04-14 21:50:11] Set ATHENA_PROC_NUMBER=9
[2025-04-14 21:50:11] Set ATHENA_CORE_NUMBER=9
[2025-04-14 21:50:11] Starting ATLAS job with PandaID=6602906027
[2025-04-14 21:50:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 10:05:08]  *** The last 200 lines of the pilot log: ***
[2025-04-16 10:05:08] 2025-04-16 14:04:45,714 | INFO     | job 6602906027 has state=finished
[2025-04-16 10:05:08] 2025-04-16 14:04:45,714 | INFO     | preparing for final server update for job 6602906027 in state='finished'
[2025-04-16 10:05:08] 2025-04-16 14:04:45,715 | INFO     | this job has now completed (state=finished)
[2025-04-16 10:05:08] 2025-04-16 14:04:45,715 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 10:05:08] 2025-04-16 14:04:45,715 | INFO     | log transfer has been attempted: DONE
[2025-04-16 10:05:08] 2025-04-16 14:04:45,715 | INFO     | job 6602906027 has finished - writing final server update
[2025-04-16 10:05:08] 2025-04-16 14:04:45,715 | INFO     | total number of processed events: 1000 (read)
[2025-04-16 10:05:08] 2025-04-16 14:04:45,732 | INFO     | executing command: lscpu
[2025-04-16 10:05:08] 2025-04-16 14:04:45,797 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 10:05:08] 2025-04-16 14:04:46,206 | INFO     | monitor loop #7709: job 0:6602906027 is in state 'finished'
[2025-04-16 10:05:08] 2025-04-16 14:04:46,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 10:05:08] 2025-04-16 14:04:48,720 | INFO     | monitor loop #7710: job 0:6602906027 is in state 'finished'
[2025-04-16 10:05:08] 2025-04-16 14:04:48,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 10:05:08] 2025-04-16 14:04:51,223 | INFO     | monitor loop #7711: job 0:6602906027 is in state 'finished'
[2025-04-16 10:05:08] 2025-04-16 14:04:51,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 10:05:08] 2025-04-16 14:04:52,712 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-16 10:05:08] 2025-04-16 14:04:52,712 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6602906027/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 10:05:08] 2025-04-16 14:04:52,713 | INFO     | extracted standard info from prmon json
[2025-04-16 10:05:08] 2025-04-16 14:04:52,713 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 10:05:08] 2025-04-16 14:04:52,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 10:05:08] 2025-04-16 14:04:52,744 | INFO     | fitting pss+swap vs Time
[2025-04-16 10:05:08] 2025-04-16 14:04:52,747 | INFO     | sum of square deviations: 3013213497174.7637
[2025-04-16 10:05:08] 2025-04-16 14:04:52,829 | INFO     | sum of deviations: 16503502384303.67
[2025-04-16 10:05:08] 2025-04-16 14:04:52,829 | INFO     | mean x: 1744747219.3313026
[2025-04-16 10:05:08] 2025-04-16 14:04:52,829 | INFO     | mean y: 3436977.9976569824
[2025-04-16 10:05:08] 2025-04-16 14:04:52,829 | INFO     | -- intersect: -9552620009.414442
[2025-04-16 10:05:08] 2025-04-16 14:04:52,829 | INFO     | intersect: -9552620009.414442
[2025-04-16 10:05:08] 2025-04-16 14:04:52,832 | INFO     | chi2: 33.52922113075455
[2025-04-16 10:05:08] 2025-04-16 14:04:52,834 | INFO     | sum of square deviations: 2992085296206.852
[2025-04-16 10:05:08] 2025-04-16 14:04:52,924 | INFO     | sum of deviations: 17393787263874.83
[2025-04-16 10:05:08] 2025-04-16 14:04:52,925 | INFO     | mean x: 1744747066.8449976
[2025-04-16 10:05:08] 2025-04-16 14:04:52,925 | INFO     | mean y: 3443402.8661343353
[2025-04-16 10:05:08] 2025-04-16 14:04:52,925 | INFO     | -- intersect: -10139235132.550007
[2025-04-16 10:05:08] 2025-04-16 14:04:52,925 | INFO     | intersect: -10139235132.550007
[2025-04-16 10:05:08] 2025-04-16 14:04:52,927 | INFO     | chi2: 30.213647247754032
[2025-04-16 10:05:08] 2025-04-16 14:04:52,927 | INFO     | current chi2=30.213647247754032 (change=9.88860990856516 %)
[2025-04-16 10:05:08] 2025-04-16 14:04:52,928 | INFO     | right removable region: 2128
[2025-04-16 10:05:08] 2025-04-16 14:04:52,930 | INFO     | sum of square deviations: 2992077705366.8516
[2025-04-16 10:05:08] 2025-04-16 14:04:53,009 | INFO     | sum of deviations: 15418347180238.732
[2025-04-16 10:05:08] 2025-04-16 14:04:53,010 | INFO     | mean x: 1744747371.8449976
[2025-04-16 10:05:08] 2025-04-16 14:04:53,010 | INFO     | mean y: 3444808.038515735
[2025-04-16 10:05:08] 2025-04-16 14:04:53,010 | INFO     | -- intersect: -8987337975.66495
[2025-04-16 10:05:08] 2025-04-16 14:04:53,010 | INFO     | intersect: -8987337975.66495
[2025-04-16 10:05:08] 2025-04-16 14:04:53,012 | INFO     | chi2: 28.59474559025288
[2025-04-16 10:05:08] 2025-04-16 14:04:53,012 | INFO     | current chi2=28.59474559025288 (change=14.716940549434772 %)
[2025-04-16 10:05:08] 2025-04-16 14:04:53,012 | INFO     | left removable region: 10
[2025-04-16 10:05:08] 2025-04-16 14:04:53,014 | INFO     | sum of square deviations: 2945936442978.341
[2025-04-16 10:05:08] 2025-04-16 14:04:53,093 | INFO     | sum of deviations: 15551736593617.406
[2025-04-16 10:05:08] 2025-04-16 14:04:53,093 | INFO     | mean x: 1744747341.374882
[2025-04-16 10:05:08] 2025-04-16 14:04:53,093 | INFO     | mean y: 3459340.688385269
[2025-04-16 10:05:08] 2025-04-16 14:04:53,093 | INFO     | -- intersect: -9207143671.521925
[2025-04-16 10:05:08] 2025-04-16 14:04:53,093 | INFO     | intersect: -9207143671.521925
[2025-04-16 10:05:08] 2025-04-16 14:04:53,095 | INFO     | chi2: 21.07889852705077
[2025-04-16 10:05:08] 2025-04-16 14:04:53,096 | INFO     | -- intersect: -9207143671.521925
[2025-04-16 10:05:08] 2025-04-16 14:04:53,096 | INFO     | current memory leak: 5.28 B/s (using 2118 data points, chi2=21.08)
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | ..............................
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . Timing measurements:
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . get job = 0 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . initial setup = 7 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . payload setup = 105 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . stage-in = 0 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . payload execution = 130167 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . stage-out = 5 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | . log creation = 1 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,098 | INFO     | ..............................
[2025-04-16 10:05:08] 2025-04-16 14:04:53,188 | INFO     | 
[2025-04-16 10:05:08] 2025-04-16 14:04:53,188 | INFO     | job summary report
[2025-04-16 10:05:08] 2025-04-16 14:04:53,193 | INFO     | --------------------------------------------------
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | PanDA job id: 6602906027
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | task id: 43927068
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | errors: (none)
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | pilot state: finished 
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | transexitcode: 0
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | exeerrorcode: 0
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | exeerrordiag: 
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | exitcode: 0
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | exitmsg: OK
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | cpuconsumptiontime: 459499 s
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | nevents: 1000
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | neventsw: 0
[2025-04-16 10:05:08] 2025-04-16 14:04:53,194 | INFO     | pid: 3431330
[2025-04-16 10:05:08] 2025-04-16 14:04:53,195 | INFO     | pgrp: 3431330
[2025-04-16 10:05:08] 2025-04-16 14:04:53,195 | INFO     | corecount: 9
[2025-04-16 10:05:08] 2025-04-16 14:04:53,195 | INFO     | event service: False
[2025-04-16 10:05:08] 2025-04-16 14:04:53,195 | INFO     | sizes: {0: 2416935, 1: 2417536, 2: 2417620, 4: 2417676, 5: 2417676, 6: 2417875, 7: 2418031, 18: 2418059, 29: 2418087, 40: 2418115, 52: 2418143, 54: 2418657, 64: 24
[2025-04-16 10:05:08] 2025-04-16 14:04:53,195 | INFO     | --------------------------------------------------
[2025-04-16 10:05:08] 2025-04-16 14:04:53,195 | INFO     | 
[2025-04-16 10:05:08] 2025-04-16 14:04:53,195 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-16 10:05:08] 2025-04-16 14:04:53,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 10:05:08] 2025-04-16 14:04:53,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 10:05:08] 2025-04-16 14:04:53,220 | INFO     | job 6602906027 has completed (purged errors)
[2025-04-16 10:05:08] 2025-04-16 14:04:53,220 | INFO     | overall cleanup function is called
[2025-04-16 10:05:08] 2025-04-16 14:04:54,247 | INFO     | --- collectZombieJob: --- 10, [3431330]
[2025-04-16 10:05:08] 2025-04-16 14:04:54,247 | INFO     | zombie collector waiting for pid 3431330
[2025-04-16 10:05:08] 2025-04-16 14:04:54,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 10:05:08] 2025-04-16 14:04:54,247 | INFO     | collected zombie processes
[2025-04-16 10:05:08] 2025-04-16 14:04:54,247 | INFO     | will attempt to kill all subprocesses of pid=3431330
[2025-04-16 10:05:08] 2025-04-16 14:04:54,819 | INFO     | process IDs to be killed: [3431330] (in reverse order)
[2025-04-16 10:05:08] 2025-04-16 14:04:55,127 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 10:05:08] 2025-04-16 14:04:55,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 10:05:08] 2025-04-16 14:04:55,166 | INFO     | did not find any defunct processes belonging to 3431330
[2025-04-16 10:05:08] 2025-04-16 14:04:55,188 | INFO     | did not find any defunct processes belonging to 3431330
[2025-04-16 10:05:08] 2025-04-16 14:04:55,189 | INFO     | ready for new job
[2025-04-16 10:05:08] 2025-04-16 14:04:55,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 10:05:08] 2025-04-16 14:04:55,211 | INFO     | **************************************
[2025-04-16 10:05:08] 2025-04-16 14:04:55,211 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 10:05:08] 2025-04-16 14:04:55,211 | INFO     | **************************************
[2025-04-16 10:05:08] 2025-04-16 14:04:55,211 | INFO     | 
[2025-04-16 10:05:08] 2025-04-16 14:04:55,225 | INFO     | architecture information:
[2025-04-16 10:05:08] 2025-04-16 14:04:55,226 | INFO     | executing command: cat /etc/os-release
[2025-04-16 10:05:08] 2025-04-16 14:04:55,245 | INFO     | cat /etc/os-release:
[2025-04-16 10:05:08] NAME="CentOS Linux"
[2025-04-16 10:05:08] VERSION="7 (Core)"
[2025-04-16 10:05:08] ID="centos"
[2025-04-16 10:05:08] ID_LIKE="rhel fedora"
[2025-04-16 10:05:08] VERSION_ID="7"
[2025-04-16 10:05:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 10:05:08] ANSI_COLOR="0;31"
[2025-04-16 10:05:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 10:05:08] HOME_URL="https://www.centos.org/"
[2025-04-16 10:05:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 10:05:08] 
[2025-04-16 10:05:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 10:05:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 10:05:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 10:05:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 10:05:08] 
[2025-04-16 10:05:08] 2025-04-16 14:04:55,245 | INFO     | **************************************
[2025-04-16 10:05:08] 2025-04-16 14:04:55,749 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-16 10:05:08] 2025-04-16 14:04:55,774 | INFO     | sufficient remaining disk space (74226597888 B)
[2025-04-16 10:05:08] 2025-04-16 14:04:55,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 10:05:08] 2025-04-16 14:04:55,775 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 10:05:08] 2025-04-16 14:04:55,775 | INFO     | update_server=False
[2025-04-16 10:05:08] 2025-04-16 14:04:55,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 10:05:08] 2025-04-16 14:04:55,776 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 10:05:08] 2025-04-16 14:04:55,776 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 10:05:08] 2025-04-16 14:04:55,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 10:05:08] 2025-04-16 14:04:55,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 10:05:08] 2025-04-16 14:04:55,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 10:05:08] 2025-04-16 14:04:56,174 | INFO     | all job control threads have been joined
[2025-04-16 10:05:08] 2025-04-16 14:04:56,205 | INFO     | all data control threads have been joined
[2025-04-16 10:05:08] 2025-04-16 14:04:56,251 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 10:05:08] 2025-04-16 14:04:56,251 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 10:05:08] 2025-04-16 14:04:56,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 10:05:08] 2025-04-16 14:04:56,251 | INFO     | will abort loop
[2025-04-16 10:05:08] 2025-04-16 14:04:56,621 | INFO     | all payload control threads have been joined
[2025-04-16 10:05:08] 2025-04-16 14:04:56,781 | INFO     | [job] retrieve thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:56,859 | INFO     | [payload] failed_post thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:56,860 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,021 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,069 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,180 | INFO     | [job] control thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,211 | INFO     | [data] control thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,257 | INFO     | [job] job monitor thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,389 | INFO     | [payload] validate_post thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,627 | INFO     | [payload] control thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:57,959 | INFO     | [data] copytool_out thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:58,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 10:05:08] 2025-04-16 14:04:58,168 | INFO     | [data] copytool_in thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:58,186 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:58,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 10:05:08] 2025-04-16 14:04:58,220 | INFO     | [job] validate thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:04:59,215 | INFO     | [job] queue monitor thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:05:02,053 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 10:05:08] 2025-04-16 14:05:02,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958157408064)>', '<ExcThread(monitor, started 139957658175232)>']
[2025-04-16 10:05:08] 2025-04-16 14:05:03,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 10:05:08] 2025-04-16 14:05:03,835 | INFO     | [monitor] control thread has ended
[2025-04-16 10:05:08] 2025-04-16 14:05:07,991 | INFO     | all workflow threads have been joined
[2025-04-16 10:05:08] 2025-04-16 14:05:07,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 10:05:08] 2025-04-16 14:05:07,992 | INFO     | traces error code: 0
[2025-04-16 10:05:08] 2025-04-16 14:05:07,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 10:05:08] 2025-04-16 14:05:08,184 [wrapper] ==== pilot stdout END ====
[2025-04-16 10:05:08] 2025-04-16 14:05:08,200 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 10:05:08] 2025-04-16 14:05:08,227 [wrapper] pilotpid: 3413236
[2025-04-16 10:05:08] 2025-04-16 14:05:08,230 [wrapper] Pilot exit status: 0
[2025-04-16 10:05:08] 2025-04-16 14:05:08,284 [wrapper] pandaids: 6602906027
[2025-04-16 10:05:08] 2025-04-16 14:05:08,380 [wrapper] cleanup supervisor_pilot   17282 3413237
[2025-04-16 10:05:08] 2025-04-16 14:05:08,394 [wrapper] Test setup, not cleaning
[2025-04-16 10:05:08] 2025-04-16 14:05:08,405 [wrapper] apfmon messages muted
[2025-04-16 10:05:08] 2025-04-16 14:05:08,424 [wrapper] ==== wrapper stdout END ====
[2025-04-16 10:05:08] 2025-04-16 14:05:08,428 [wrapper] ==== wrapper stderr END ====
[2025-04-16 10:05:08]  *** Error codes and diagnostics ***
[2025-04-16 10:05:08]     "exeErrorCode": 0,
[2025-04-16 10:05:08]     "exeErrorDiag": "",
[2025-04-16 10:05:08]     "pilotErrorCode": 0,
[2025-04-16 10:05:08]     "pilotErrorDiag": "",
[2025-04-16 10:05:08]  *** Listing of results directory ***
[2025-04-16 10:05:08] total 962696
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas    495897 Apr 14 17:15 pilot3.tar.gz
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas      5111 Apr 14 17:38 queuedata.json
[2025-04-16 10:05:08] -rwx------. 1 boincer umatlas     37140 Apr 14 17:40 runpilot2-wrapper.sh
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas       100 Apr 14 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 10:05:08] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 14 21:50 run_atlas
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas       105 Apr 14 21:50 job.xml
[2025-04-16 10:05:08] -rw-r--r--. 2 boincer umatlas 323081101 Apr 14 21:50 EVNT.43927057._000003.pool.root.1
[2025-04-16 10:05:08] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 21:50 start_atlas.sh
[2025-04-16 10:05:08] drwxrwx--x. 2 boincer umatlas      4096 Apr 14 21:50 shared
[2025-04-16 10:05:08] -rw-r--r--. 2 boincer umatlas    509062 Apr 14 21:50 input.tar.gz
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas         0 Apr 14 21:50 boinc_lockfile
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas      2809 Apr 14 21:50 pandaJob.out
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas       467 Apr 14 21:50 setup.sh.local
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas    983985 Apr 14 21:51 agis_schedconf.cvmfs.json
[2025-04-16 10:05:08] drwx------. 4 boincer umatlas      4096 Apr 14 21:51 pilot3
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas       534 Apr 16 09:45 boinc_task_state.xml
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas 633168425 Apr 16 10:04 HITS.43927068._000025.pool.root.1
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas      1077 Apr 16 10:04 memory_monitor_summary.json
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas      6842 Apr 16 10:04 init_data.xml
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas   1603529 Apr 16 10:04 agis_ddmendpoints.agis.ALL.json
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas        95 Apr 16 10:04 pilot_heartbeat.json
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas   2531192 Apr 16 10:04 log.43927068._000025.job.log.tgz.1
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas     28325 Apr 16 10:04 heartbeat.json
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 10:05 boinc_mmap_file
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas        30 Apr 16 10:05 wrapper_checkpoint.txt
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas      4662 Apr 16 10:05 pilotlog.txt
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas  10298575 Apr 16 10:05 log.43927068._000025.job.log.1
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas       353 Apr 16 10:05 output.list
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas       620 Apr 16 10:05 runtime_log
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas  12871680 Apr 16 10:05 result.tar.gz
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas     11425 Apr 16 10:05 runtime_log.err
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas       670 Apr 16 10:05 0TbLDmCjgO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmKxWLDm51fhtn.diag
[2025-04-16 10:05:08] -rw-r--r--. 1 boincer umatlas     21471 Apr 16 10:05 stderr.txt
[2025-04-16 10:05:08] HITS file was successfully produced:
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas 633168425 Apr 16 10:04 shared/HITS.pool.root.1
[2025-04-16 10:05:08]  *** Contents of shared directory: ***
[2025-04-16 10:05:08] total 946944
[2025-04-16 10:05:08] -rw-r--r--. 2 boincer umatlas 323081101 Apr 14 21:50 ATLAS.root_0
[2025-04-16 10:05:08] -rw-r--r--. 2 boincer umatlas     17569 Apr 14 21:50 start_atlas.sh
[2025-04-16 10:05:08] -rw-r--r--. 2 boincer umatlas    509062 Apr 14 21:50 input.tar.gz
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas 633168425 Apr 16 10:04 HITS.pool.root.1
[2025-04-16 10:05:08] -rw-------. 1 boincer umatlas  12871680 Apr 16 10:05 result.tar.gz
10:05:10 (3407688): run_atlas exited; CPU time 461200.640691
10:05:10 (3407688): called boinc_finish(0)

</stderr_txt>
]]>

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